| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is 157370509
Identifier: 157370509
GI number: 157370509
Start: 2470649
End: 2471356
Strand: Reverse
Name: 157370509
Synonym: Spro_2269
Alternate gene names: NA
Gene position: 2471356-2470649 (Counterclockwise)
Preceding gene: 157370510
Following gene: 157370508
Centisome position: 45.36
GC content: 34.75
Gene sequence:
>708_bases ATGTCTAGAACTATCATAATGAAAGAGCTTGTTATGAAATCAAATATGTTAAAATTTAATGTAAAACTGGCAATGGTAGC ATCAATAATTACGCTATCACTATTTAATTACTGTAAAGCAGATGCTTCGGTAAAAAGCAGTCCTGAATATTTAAAATTAA AAGAAATGTACTCTCAACATCCTGGTCACTTCAAATATATAATGTTTGGCGATAGTATAACCAAAAGTGGCAAATGGAAT GACTTACTACCTGGCTACTCAATAGGAAATAGAGGAATTAGTGGCGATGATACTTCAGGAATGCTTGACAGGACTGTAGA TATTGAAAGAACAGGGGCCAAAACAGTATTCATAATGGCCGGAACTAATGATATTTCAAGAAACATTACCCCTAGAGATG TTGCTAGAAACATCATCTCAATTTCAAACAGACTGAAGGCTGATGGAATTAATGTTGTAATTCAATCTACAATCTTGTCT GGTGAAAGCAAGGCTGGGAAAAACCCATCAATAAACACCATTAATAACTTACTGAAAAGTTATTCAATTAAATCAGGAAC GACATTTCTAGATTTAAATACTAAGCTATCAGAAAATGGCTTACTAAAGAGCGAGTATACTTATGACGGTACACACCTTA CCGATAAGGGGTACGAAGTATGGAAGGGCATACTCCTAGACTTCTTAAAGAGCTATGGACAACACTAG
Upstream 100 bases:
>100_bases CCCACCACCTTGGCTAACCTTTAACTCAAAGATAAAATTTATTCTCACTGAGCTACCTAAGCGAATACTTGCTTGCTAAG TTTTTTTTGAATATGCTCAG
Downstream 100 bases:
>100_bases TCATATTCACATGCAATTCGCAAGTTAAGATTTATAACACTATTCACATAGCCCCTGCATAGCTGCTGAACTCGCGGCTA TGAAGCCGCATGCTCACCAT
Product: GDSL family lipase
Products: NA
Alternate protein names: GDSL Family Lipase; Sialate-O-Acetyltransferase; GDSL-Like Lipase/Acylhydrolase Domain Protein; Acylhydrolase; Lipolytic Protein; SGNH Hydrolase; Lipase/Acylhydrolase; Lipase/Acylhydrolase Family Protein; GDSL-Like Lipase/Acylhydrolase Domain-Containing Protein; Beta-Lactamase/Acylhydrolase; Sialate O-Acetylesterase; Lipolytic G-D-S-L; Esterase; Platelet-Activating Factor Acetylhydrolase IB Gamma Subunit; Capsular Polysaccharide Biosynthesis Protein
Number of amino acids: Translated: 235; Mature: 234
Protein sequence:
>235_residues MSRTIIMKELVMKSNMLKFNVKLAMVASIITLSLFNYCKADASVKSSPEYLKLKEMYSQHPGHFKYIMFGDSITKSGKWN DLLPGYSIGNRGISGDDTSGMLDRTVDIERTGAKTVFIMAGTNDISRNITPRDVARNIISISNRLKADGINVVIQSTILS GESKAGKNPSINTINNLLKSYSIKSGTTFLDLNTKLSENGLLKSEYTYDGTHLTDKGYEVWKGILLDFLKSYGQH
Sequences:
>Translated_235_residues MSRTIIMKELVMKSNMLKFNVKLAMVASIITLSLFNYCKADASVKSSPEYLKLKEMYSQHPGHFKYIMFGDSITKSGKWN DLLPGYSIGNRGISGDDTSGMLDRTVDIERTGAKTVFIMAGTNDISRNITPRDVARNIISISNRLKADGINVVIQSTILS GESKAGKNPSINTINNLLKSYSIKSGTTFLDLNTKLSENGLLKSEYTYDGTHLTDKGYEVWKGILLDFLKSYGQH >Mature_234_residues SRTIIMKELVMKSNMLKFNVKLAMVASIITLSLFNYCKADASVKSSPEYLKLKEMYSQHPGHFKYIMFGDSITKSGKWND LLPGYSIGNRGISGDDTSGMLDRTVDIERTGAKTVFIMAGTNDISRNITPRDVARNIISISNRLKADGINVVIQSTILSG ESKAGKNPSINTINNLLKSYSIKSGTTFLDLNTKLSENGLLKSEYTYDGTHLTDKGYEVWKGILLDFLKSYGQH
Specific function: Unknown
COG id: COG2755
COG function: function code E; Lysophospholipase L1 and related esterases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26084; Mature: 25953
Theoretical pI: Translated: 9.87; Mature: 9.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRTIIMKELVMKSNMLKFNVKLAMVASIITLSLFNYCKADASVKSSPEYLKLKEMYSQH CCCHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCC PGHFKYIMFGDSITKSGKWNDLLPGYSIGNRGISGDDTSGMLDRTVDIERTGAKTVFIMA CCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCEEEEECCCCCEEEEEE GTNDISRNITPRDVARNIISISNRLKADGINVVIQSTILSGESKAGKNPSINTINNLLKS CCCHHCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHH YSIKSGTTFLDLNTKLSENGLLKSEYTYDGTHLTDKGYEVWKGILLDFLKSYGQH CCCCCCCEEEEECCCCCCCCCCCCCCEECCCEECCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SRTIIMKELVMKSNMLKFNVKLAMVASIITLSLFNYCKADASVKSSPEYLKLKEMYSQH CCHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCC PGHFKYIMFGDSITKSGKWNDLLPGYSIGNRGISGDDTSGMLDRTVDIERTGAKTVFIMA CCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCEEEEECCCCCEEEEEE GTNDISRNITPRDVARNIISISNRLKADGINVVIQSTILSGESKAGKNPSINTINNLLKS CCCHHCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHH YSIKSGTTFLDLNTKLSENGLLKSEYTYDGTHLTDKGYEVWKGILLDFLKSYGQH CCCCCCCEEEEECCCCCCCCCCCCCCEECCCEECCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA