Click here to switch to the map view.

The map label for this gene is araA

Identifier: 157370483

GI number: 157370483

Start: 2443070

End: 2444575

Strand: Reverse

Name: araA

Synonym: Spro_2243

Alternate gene names: 157370483

Gene position: 2444575-2443070 (Counterclockwise)

Preceding gene: 157370484

Following gene: 157370482

Centisome position: 44.86

GC content: 59.56

Gene sequence:

>1506_bases
ATGAATGCATTCAAGCAGCGCGAAGTCTGGTTCGCCATTGGCAGCCAACATCTGTACGGCCCGCAAACCCTGCAACAGGT
CAAGGCACACGCCGAACAGGTGGTGGACAGTCTCAACCGCGAAGCCGGCCTACCGGTAAAACTGGTGCTGAAACCGCTGG
TCACCACGCCGGATGAAATCACCGCCCTGTGCCGTGACGCCAACTATCAACCGCAGTGTATTGGCATCCTGGCCTGGCTA
CACACATTCTCACCGGCCAAAATGTGGATCGCCGGTCTGTCCGTGCTGCATAAGCCGCTGTTGCAGTTCCATACCCAGTT
CAACGCCCAGGTGCCCTGGGACAGTATGGATATGGACTTTATGAACCTCAACCAAACCGCCCACGGCGGCCGTGAGTTCG
GCTTTATCGGCGCCCGTATGCGCCAGCAGCACAGCGTGATTGCCGGTCACTGGCAGGATCCCGAGGCACACCGGCGCATT
GGCCAGTGGATGCGTGTCGCCAGCGCCAAACAGGCCGGCCAGCAGCTGAAAGTGGCCCGTTTTGGCGACAACATGCGCGA
AGTGGCGGTGACCGATGGCGACAAGGTCGGTGCGCAGATCCAGTTTGGTTACTCGGTCAATGCCTATGGTATTGGCGATT
TGGTCAGCGTCATTAACGAAGTCAGCCGTGGCGATGTAGATACGCTGATTGAAGAGTATGAGGCCAGCTATGTGCTGAGC
GATGCGGCCAAAATCAACGGCGCAAAACGCGAAAACCTGACTGACGCGGCACGTATCGAGCTGGGCATGAAACGCTTCCT
CGAACAGGGCAACTTCCAGGCCTTCACCACCAACTTTGAAGACCTGCACGGCATGAAACAGCTGCCGGGGTTGGCGGTAC
AACGCCTGATGCAACAAGGCTACGGCTTTGGCGGCGAAGGCGACTGGAAAACCGCCGCGCTGCTGCGCATCCTGAAAGTG
ATGGCCGATGGGTTACACGGCGGCACCTCGTTTATGGAGGATTACACCTATCACTTCCAGCCGGGCAACGATCTGGTGGT
CGGCTCGCATATGCTGGAGGTCTGCCCGTCGATCGCCAGGGAGCCCAAACCGCTGTTGGATATCCAGCCGCTCGGTATTG
GTGGCAAGGCAGATCCGGCGCGGCTGATTTTCTCTACTCCGGCCGGCCCGGCAGTCAATGCCAGCCTGATCGACATGGGC
GATCGCTTCCGTCTGCTGGTCAATCAGGTGGACACCGTGGAACAACCGCACCCGCTGCCCAAGCTGCCGGTGGCGCGCGC
CATCTGGCGGGCCCAACCCACGCTGGCGACCGCCGCCGAAGCCTGGATCCTGGCGGGCGGCGCCCACCACACGGTGTTCT
CCCAGGCGCTGGACGCCGATATGCTGCGGCTGTATGCCGAAATGCATAACATTGAGTTCTTGCTAATTGACCAGGACACC
ACCCTGCCAGCATTCAAAAACGAGCTGCGCTGGAACGAAGCCTACTATCAACTTAACCGCCGTTAA

Upstream 100 bases:

>100_bases
CAACGCTATCAACAATGGTGCCAGGCCGCCGAGCCGCGCTACGCCCCGACCTCCGGTTCAGCAAATTAAGCCTATACCCA
ATACAGAGGAGTCTTTTTTA

Downstream 100 bases:

>100_bases
TCGCCCGGCTACCGGTGGCAAAATCGCCTGCCGGTAGCCAAACGTGCTGCCACGCCGCCTTGCTCCCGACCATCCGCTTG
ATATTGATGACGAAGCCCGC

Product: L-arabinose isomerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 501; Mature: 501

Protein sequence:

>501_residues
MNAFKQREVWFAIGSQHLYGPQTLQQVKAHAEQVVDSLNREAGLPVKLVLKPLVTTPDEITALCRDANYQPQCIGILAWL
HTFSPAKMWIAGLSVLHKPLLQFHTQFNAQVPWDSMDMDFMNLNQTAHGGREFGFIGARMRQQHSVIAGHWQDPEAHRRI
GQWMRVASAKQAGQQLKVARFGDNMREVAVTDGDKVGAQIQFGYSVNAYGIGDLVSVINEVSRGDVDTLIEEYEASYVLS
DAAKINGAKRENLTDAARIELGMKRFLEQGNFQAFTTNFEDLHGMKQLPGLAVQRLMQQGYGFGGEGDWKTAALLRILKV
MADGLHGGTSFMEDYTYHFQPGNDLVVGSHMLEVCPSIAREPKPLLDIQPLGIGGKADPARLIFSTPAGPAVNASLIDMG
DRFRLLVNQVDTVEQPHPLPKLPVARAIWRAQPTLATAAEAWILAGGAHHTVFSQALDADMLRLYAEMHNIEFLLIDQDT
TLPAFKNELRWNEAYYQLNRR

Sequences:

>Translated_501_residues
MNAFKQREVWFAIGSQHLYGPQTLQQVKAHAEQVVDSLNREAGLPVKLVLKPLVTTPDEITALCRDANYQPQCIGILAWL
HTFSPAKMWIAGLSVLHKPLLQFHTQFNAQVPWDSMDMDFMNLNQTAHGGREFGFIGARMRQQHSVIAGHWQDPEAHRRI
GQWMRVASAKQAGQQLKVARFGDNMREVAVTDGDKVGAQIQFGYSVNAYGIGDLVSVINEVSRGDVDTLIEEYEASYVLS
DAAKINGAKRENLTDAARIELGMKRFLEQGNFQAFTTNFEDLHGMKQLPGLAVQRLMQQGYGFGGEGDWKTAALLRILKV
MADGLHGGTSFMEDYTYHFQPGNDLVVGSHMLEVCPSIAREPKPLLDIQPLGIGGKADPARLIFSTPAGPAVNASLIDMG
DRFRLLVNQVDTVEQPHPLPKLPVARAIWRAQPTLATAAEAWILAGGAHHTVFSQALDADMLRLYAEMHNIEFLLIDQDT
TLPAFKNELRWNEAYYQLNRR
>Mature_501_residues
MNAFKQREVWFAIGSQHLYGPQTLQQVKAHAEQVVDSLNREAGLPVKLVLKPLVTTPDEITALCRDANYQPQCIGILAWL
HTFSPAKMWIAGLSVLHKPLLQFHTQFNAQVPWDSMDMDFMNLNQTAHGGREFGFIGARMRQQHSVIAGHWQDPEAHRRI
GQWMRVASAKQAGQQLKVARFGDNMREVAVTDGDKVGAQIQFGYSVNAYGIGDLVSVINEVSRGDVDTLIEEYEASYVLS
DAAKINGAKRENLTDAARIELGMKRFLEQGNFQAFTTNFEDLHGMKQLPGLAVQRLMQQGYGFGGEGDWKTAALLRILKV
MADGLHGGTSFMEDYTYHFQPGNDLVVGSHMLEVCPSIAREPKPLLDIQPLGIGGKADPARLIFSTPAGPAVNASLIDMG
DRFRLLVNQVDTVEQPHPLPKLPVARAIWRAQPTLATAAEAWILAGGAHHTVFSQALDADMLRLYAEMHNIEFLLIDQDT
TLPAFKNELRWNEAYYQLNRR

Specific function: Catalyzes the conversion of L-arabinose to L-ribulose

COG id: COG2160

COG function: function code G; L-arabinose isomerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the arabinose isomerase family

Homologues:

Organism=Escherichia coli, GI1786248, Length=500, Percent_Identity=73.4, Blast_Score=796, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ARAA_SERP5 (A8GE04)

Other databases:

- EMBL:   CP000826
- RefSeq:   YP_001478472.1
- ProteinModelPortal:   A8GE04
- SMR:   A8GE04
- STRING:   A8GE04
- GeneID:   5605121
- GenomeReviews:   CP000826_GR
- KEGG:   spe:Spro_2243
- eggNOG:   COG2160
- HOGENOM:   HBG297198
- OMA:   EVCPTIA
- ProtClustDB:   PRK02929
- BioCyc:   SPRO399741:SPRO_2243-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00519
- InterPro:   IPR004216
- InterPro:   IPR009015
- InterPro:   IPR003762
- PIRSF:   PIRSF001478
- ProDom:   PD018364

Pfam domain/function: PF02610 Arabinose_Isome; SSF50443 Fuc_isomerase_C; SSF53743 Fuc_isomerase_N

EC number: =5.3.1.4

Molecular weight: Translated: 55820; Mature: 55820

Theoretical pI: Translated: 6.56; Mature: 6.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAFKQREVWFAIGSQHLYGPQTLQQVKAHAEQVVDSLNREAGLPVKLVLKPLVTTPDEI
CCCCHHCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHH
TALCRDANYQPQCIGILAWLHTFSPAKMWIAGLSVLHKPLLQFHTQFNAQVPWDSMDMDF
HHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCH
MNLNQTAHGGREFGFIGARMRQQHSVIAGHWQDPEAHRRIGQWMRVASAKQAGQQLKVAR
HHCCCCCCCCCCCHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHEEHHH
FGDNMREVAVTDGDKVGAQIQFGYSVNAYGIGDLVSVINEVSRGDVDTLIEEYEASYVLS
HCCCCEEEEECCCCCCCCEEEECCEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
DAAKINGAKRENLTDAARIELGMKRFLEQGNFQAFTTNFEDLHGMKQLPGLAVQRLMQQG
HHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHCCCHHHHHHHHHC
YGFGGEGDWKTAALLRILKVMADGLHGGTSFMEDYTYHFQPGNDLVVGSHMLEVCPSIAR
CCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHCCEEEECCCCCEEECHHHHHHCHHHHC
EPKPLLDIQPLGIGGKADPARLIFSTPAGPAVNASLIDMGDRFRLLVNQVDTVEQPHPLP
CCCCCCEEEECCCCCCCCCCEEEEECCCCCCCCCHHHCCCHHHHHHHHHHHHCCCCCCCC
KLPVARAIWRAQPTLATAAEAWILAGGAHHTVFSQALDADMLRLYAEMHNIEFLLIDQDT
CCHHHHHHHHCCCCHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCC
TLPAFKNELRWNEAYYQLNRR
CCHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNAFKQREVWFAIGSQHLYGPQTLQQVKAHAEQVVDSLNREAGLPVKLVLKPLVTTPDEI
CCCCHHCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHH
TALCRDANYQPQCIGILAWLHTFSPAKMWIAGLSVLHKPLLQFHTQFNAQVPWDSMDMDF
HHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCH
MNLNQTAHGGREFGFIGARMRQQHSVIAGHWQDPEAHRRIGQWMRVASAKQAGQQLKVAR
HHCCCCCCCCCCCHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHEEHHH
FGDNMREVAVTDGDKVGAQIQFGYSVNAYGIGDLVSVINEVSRGDVDTLIEEYEASYVLS
HCCCCEEEEECCCCCCCCEEEECCEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
DAAKINGAKRENLTDAARIELGMKRFLEQGNFQAFTTNFEDLHGMKQLPGLAVQRLMQQG
HHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHCCCHHHHHHHHHC
YGFGGEGDWKTAALLRILKVMADGLHGGTSFMEDYTYHFQPGNDLVVGSHMLEVCPSIAR
CCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHCCEEEECCCCCEEECHHHHHHCHHHHC
EPKPLLDIQPLGIGGKADPARLIFSTPAGPAVNASLIDMGDRFRLLVNQVDTVEQPHPLP
CCCCCCEEEECCCCCCCCCCEEEEECCCCCCCCCHHHCCCHHHHHHHHHHHHCCCCCCCC
KLPVARAIWRAQPTLATAAEAWILAGGAHHTVFSQALDADMLRLYAEMHNIEFLLIDQDT
CCHHHHHHHHCCCCHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCC
TLPAFKNELRWNEAYYQLNRR
CCHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA