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The map label for this gene is tdcF [C]

Identifier: 157370466

GI number: 157370466

Start: 2425894

End: 2426271

Strand: Reverse

Name: tdcF [C]

Synonym: Spro_2226

Alternate gene names: 157370466

Gene position: 2426271-2425894 (Counterclockwise)

Preceding gene: 157370468

Following gene: 157370464

Centisome position: 44.53

GC content: 55.82

Gene sequence:

>378_bases
ATGACATCATTGAAGCGCATTAATTATCCGCAATTACCGACGCCGGGCGGGCCCTATGTCCATGCCGTGCGCCATGGTAA
TACGCTGTACATTTCCGGCCTGACGGCATTTGCCACCGAAGCGCAAGGGCAAACCACGCAACAACAGACGCAGGCCATTC
TTGAGCAGTTGGCGACCATCACCGCCGACGAGGGAACGAATCTAAAAGCGCTGATTAAAATCACGGTCTTTTTAACCGAT
ATCGGCGATCTGCCGGCCCTGCGGCCGGTACTGTTTGATTATTTTGATGGGGCGCTGCCGGCCTGTTCGCTGGTTGCGGT
CAGCGCACTGTTCTCACCGCTGGTCAGCGTGGAGATCGAGGCCGTAGTGGCATTATGA

Upstream 100 bases:

>100_bases
ATTATTAAAAAACAATAAATCTCTGCGTACTTCTGATGTTCGTCTCACTATCCTAACCAAGTTTGTATATTTTTTTAATT
AATCTCTCGGGGTTTTTACC

Downstream 100 bases:

>100_bases
GATTGGGGCTACAGCCCCCGATGAAAACCGACCCGGCGCACGTTTGTCTTTTCCACCTTCGGGAAACTTCTGCTAATTTA
CCACTAAGAAATTTATTACC

Product: endoribonuclease L-PSP

Products: NA

Alternate protein names: YjgF Family Translation Initiation Inhibitor; Endoribonuclease L-PSP Superfamily

Number of amino acids: Translated: 125; Mature: 124

Protein sequence:

>125_residues
MTSLKRINYPQLPTPGGPYVHAVRHGNTLYISGLTAFATEAQGQTTQQQTQAILEQLATITADEGTNLKALIKITVFLTD
IGDLPALRPVLFDYFDGALPACSLVAVSALFSPLVSVEIEAVVAL

Sequences:

>Translated_125_residues
MTSLKRINYPQLPTPGGPYVHAVRHGNTLYISGLTAFATEAQGQTTQQQTQAILEQLATITADEGTNLKALIKITVFLTD
IGDLPALRPVLFDYFDGALPACSLVAVSALFSPLVSVEIEAVVAL
>Mature_124_residues
TSLKRINYPQLPTPGGPYVHAVRHGNTLYISGLTAFATEAQGQTTQQQTQAILEQLATITADEGTNLKALIKITVFLTDI
GDLPALRPVLFDYFDGALPACSLVAVSALFSPLVSVEIEAVVAL

Specific function: Anaerobic degradation of L-threonine to propionate. [C]

COG id: COG0251

COG function: function code J; Putative translation initiation inhibitor, yjgF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13313; Mature: 13182

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSLKRINYPQLPTPGGPYVHAVRHGNTLYISGLTAFATEAQGQTTQQQTQAILEQLATI
CCCCCCCCCCCCCCCCCCEEEEEECCCEEEEECHHHHHHCCCCCCHHHHHHHHHHHHHHH
TADEGTNLKALIKITVFLTDIGDLPALRPVLFDYFDGALPACSLVAVSALFSPLVSVEIE
CCCCCCCEEEEEEEEEEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHE
AVVAL
EEEEC
>Mature Secondary Structure 
TSLKRINYPQLPTPGGPYVHAVRHGNTLYISGLTAFATEAQGQTTQQQTQAILEQLATI
CCCCCCCCCCCCCCCCCEEEEEECCCEEEEECHHHHHHCCCCCCHHHHHHHHHHHHHHH
TADEGTNLKALIKITVFLTDIGDLPALRPVLFDYFDGALPACSLVAVSALFSPLVSVEIE
CCCCCCCEEEEEEEEEEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHE
AVVAL
EEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA