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The map label for this gene is ydhJ [H]

Identifier: 157370452

GI number: 157370452

Start: 2414647

End: 2415504

Strand: Reverse

Name: ydhJ [H]

Synonym: Spro_2212

Alternate gene names: 157370452

Gene position: 2415504-2414647 (Counterclockwise)

Preceding gene: 157370453

Following gene: 157370451

Centisome position: 44.33

GC content: 48.37

Gene sequence:

>858_bases
ATGACACATAAAACATTAAAATATTTTTCTACGGTAATCGTCTGTGCCATTGCCATCTGTGCCGGCTGGTGGTTGTGGAA
TTATTATATGCAATCCCCGTGGACCCGTGATGGAAAGGTACGCGCCGAACTCGTCAATATCACACCAGAAGTTTCTGGAA
GATTAGAGAAAATAACCGTTCATGACAATCAGTTCATACCTGCGGGAAGTCTGATTTTTGCGATCGACCCCGTGCCATAC
CAGATTGCGCTCGACAATGCTGAGGCCGCACTGGCAAAAGCACGGTCCGATATGGCCAAAACCGACCATGAAGCGGCTCG
CCGTCGCAGCCTGCCAAAAAATGTTATTTCTGCAGAAGATATGGATGAGTCAAATTTAGCAGCCCAGGCAATGAAAGCGG
CCTATAAAGCCGCTCAGGCCAATCTGGAACAGGCCAAATGGAATTTAAGTAAAACTAAAATTTATGCCCCTACCGATGGC
TATATCACCAATTTACAAGCCCGGGTCGGAAACTATGCCAGTGCCGGGACTCCGCTGGTCGCACTGGTCGACGTACATTC
TTTTTATGTCCTCGGCTATTTTGAAGAAACCAAGCTAAAGCATATAAAAGAAGGCAATAAAGCGGATATCGTTTTATATA
ATGGCAACACTCAGCTCCGGGGCGAAGTAGAAAGCATTGGCCGCGCCATTTACGATCAGAGCGTTGAAAGCAGCAGTGAT
TTATTAATGGACGTGAAGCCCAACGTGCCTTGGGTACGGCTGGCACAGCGCGTGCCGGTGCGGATAAAACTGCTGGATGT
GCCTGCTGATTTACCCTTGGTCGCCGGCACCACCTGCACCATCTCCATTCATCAGTAA

Upstream 100 bases:

>100_bases
GATTTATTCCGGCGAAATTTGGCATCCCATGCTGATGGATTTGTCTATTTTCGTCATTGCCGTCAGCGGCGCCCTGTGGC
TTTTAGCAAGTTGGTAACCG

Downstream 100 bases:

>100_bases
GGCTTACCAGTGAACCTGCCTTTTTTGGAATGGAACCGTACCCCCTGGGGGAAAGCCAGCGCTGGGCAATGGCGTTATGC
GCTGCGCAATTCACTGGCGA

Product: secretion protein HlyD family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 284

Protein sequence:

>285_residues
MTHKTLKYFSTVIVCAIAICAGWWLWNYYMQSPWTRDGKVRAELVNITPEVSGRLEKITVHDNQFIPAGSLIFAIDPVPY
QIALDNAEAALAKARSDMAKTDHEAARRRSLPKNVISAEDMDESNLAAQAMKAAYKAAQANLEQAKWNLSKTKIYAPTDG
YITNLQARVGNYASAGTPLVALVDVHSFYVLGYFEETKLKHIKEGNKADIVLYNGNTQLRGEVESIGRAIYDQSVESSSD
LLMDVKPNVPWVRLAQRVPVRIKLLDVPADLPLVAGTTCTISIHQ

Sequences:

>Translated_285_residues
MTHKTLKYFSTVIVCAIAICAGWWLWNYYMQSPWTRDGKVRAELVNITPEVSGRLEKITVHDNQFIPAGSLIFAIDPVPY
QIALDNAEAALAKARSDMAKTDHEAARRRSLPKNVISAEDMDESNLAAQAMKAAYKAAQANLEQAKWNLSKTKIYAPTDG
YITNLQARVGNYASAGTPLVALVDVHSFYVLGYFEETKLKHIKEGNKADIVLYNGNTQLRGEVESIGRAIYDQSVESSSD
LLMDVKPNVPWVRLAQRVPVRIKLLDVPADLPLVAGTTCTISIHQ
>Mature_284_residues
THKTLKYFSTVIVCAIAICAGWWLWNYYMQSPWTRDGKVRAELVNITPEVSGRLEKITVHDNQFIPAGSLIFAIDPVPYQ
IALDNAEAALAKARSDMAKTDHEAARRRSLPKNVISAEDMDESNLAAQAMKAAYKAAQANLEQAKWNLSKTKIYAPTDGY
ITNLQARVGNYASAGTPLVALVDVHSFYVLGYFEETKLKHIKEGNKADIVLYNGNTQLRGEVESIGRAIYDQSVESSSDL
LMDVKPNVPWVRLAQRVPVRIKLLDVPADLPLVAGTTCTISIHQ

Specific function: Unknown

COG id: COG1566

COG function: function code V; Multidrug resistance efflux pump

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]

Homologues:

Organism=Escherichia coli, GI87081951, Length=285, Percent_Identity=62.8070175438596, Blast_Score=388, Evalue=1e-109,
Organism=Escherichia coli, GI1789637, Length=274, Percent_Identity=39.051094890511, Blast_Score=198, Evalue=3e-52,
Organism=Escherichia coli, GI1790519, Length=292, Percent_Identity=31.5068493150685, Blast_Score=125, Evalue=4e-30,
Organism=Escherichia coli, GI1790024, Length=255, Percent_Identity=25.4901960784314, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1788711, Length=331, Percent_Identity=25.9818731117825, Blast_Score=79, Evalue=4e-16,
Organism=Escherichia coli, GI87082036, Length=170, Percent_Identity=28.2352941176471, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI1790012, Length=284, Percent_Identity=22.5352112676056, Blast_Score=66, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006143 [H]

Pfam domain/function: PF00529 HlyD [H]

EC number: NA

Molecular weight: Translated: 31591; Mature: 31460

Theoretical pI: Translated: 8.06; Mature: 8.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTHKTLKYFSTVIVCAIAICAGWWLWNYYMQSPWTRDGKVRAELVNITPEVSGRLEKITV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCEEEEEE
HDNQFIPAGSLIFAIDPVPYQIALDNAEAALAKARSDMAKTDHEAARRRSLPKNVISAED
ECCCCCCCCCEEEEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCC
MDESNLAAQAMKAAYKAAQANLEQAKWNLSKTKIYAPTDGYITNLQARVGNYASAGTPLV
CCHHHHHHHHHHHHHHHHHCCHHHHHCCCCCEEEECCCCCCEEEHHHHHCCCCCCCCCEE
ALVDVHSFYVLGYFEETKLKHIKEGNKADIVLYNGNTQLRGEVESIGRAIYDQSVESSSD
EEEEEEEEEEEEEEHHHHHHHHCCCCCEEEEEECCCCEECCHHHHHHHHHHHHCCCCCCC
LLMDVKPNVPWVRLAQRVPVRIKLLDVPADLPLVAGTTCTISIHQ
EEEEECCCCCHHHHHCCCCEEEEEEECCCCCCEEECCEEEEEEEC
>Mature Secondary Structure 
THKTLKYFSTVIVCAIAICAGWWLWNYYMQSPWTRDGKVRAELVNITPEVSGRLEKITV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCEEEEEE
HDNQFIPAGSLIFAIDPVPYQIALDNAEAALAKARSDMAKTDHEAARRRSLPKNVISAED
ECCCCCCCCCEEEEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCC
MDESNLAAQAMKAAYKAAQANLEQAKWNLSKTKIYAPTDGYITNLQARVGNYASAGTPLV
CCHHHHHHHHHHHHHHHHHCCHHHHHCCCCCEEEECCCCCCEEEHHHHHCCCCCCCCCEE
ALVDVHSFYVLGYFEETKLKHIKEGNKADIVLYNGNTQLRGEVESIGRAIYDQSVESSSD
EEEEEEEEEEEEEEHHHHHHHHCCCCCEEEEEECCCCEECCHHHHHHHHHHHHCCCCCCC
LLMDVKPNVPWVRLAQRVPVRIKLLDVPADLPLVAGTTCTISIHQ
EEEEECCCCCHHHHHCCCCEEEEEEECCCCCCEEECCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]