Definition Serratia proteamaculans 568 chromosome, complete genome.
Accession NC_009832
Length 5,448,853

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The map label for this gene is ydhF [H]

Identifier: 157370448

GI number: 157370448

Start: 2409025

End: 2409921

Strand: Direct

Name: ydhF [H]

Synonym: Spro_2208

Alternate gene names: 157370448

Gene position: 2409025-2409921 (Clockwise)

Preceding gene: 157370447

Following gene: 157370450

Centisome position: 44.21

GC content: 56.86

Gene sequence:

>897_bases
ATGGTAAACCGTGTACAGCTCGCGCCGCAGGGGCCTGAATTTTCCCGCATGATTTGCGGATACTGGCGTTTGATGGAGTG
GGGCATGTCACCACAGCAGTTGCTGACGTTTATTGAGCAGCATATTGAGCTGGGTGTCACTACCGCTGACCATGCGGACA
TTTACGGCGGCTATGTCTGTGAACAAGCCTTTGGTGAAGCGATGCGTCTGAAGCCTTCACTGCGCCAGTCGATGGAACTG
GTGTCCAAATGCGGTATCGCCACCACCGCCAAACCGGGTAACCCGATTGGCCACTACATTACTGACCGTGAGCATATCGT
TAACAGTGCGGAACGCTCACTGGAGCATCTGCATACCGATTACCTCGATCTGCTGCTGATCCACCGTCCGGATCCGTTAA
TGGATGCCGATGAGGTGGCCGAAGCCTTTGTGGCGCTGCATAAAAGCGGCAAGGTACGCCATTTCGGCGTATCCAACTTC
ACCACCACGCAGTTCACGCTGTTGCAGTCGCGTCTGCCGTTCTCACTGGTGACCAATCAACTGGAGATTTCGCCGATCCA
TCAGCCAGCTATTCTGGATGGCACGCTGGATCAGTGTCAGCAATTGCGCATCAAGCCGATGGCCTGGTCTTGTTTGGGTG
GCGGCCGTCTGTTCAGCGACGCCGAATTCCAGCCACTGCGCGATGAGCTGCAGGCGGTGGCGCTGGAGATTGGCGCCGAG
TCTATCGAACAGGTGGTCTACGCCTGGGTGATGCGTTTGCCGTCGTCTCCTCTGCCGATTATTGGCTCCGGCAAGATTGA
GCGCGTGCGTTCGGCGCTGCAGGCGCAGCAGTTGACGTTGAGTCGTCAGCAGTGGTTCCGTATTCGCAAGGCGGCCCTGG
GTTACGACGTACCTTAA

Upstream 100 bases:

>100_bases
AGTCATTTCTGATCTGCCGCACGTAAGCGCGGCTTTCCGCTTCCCACCGTGTTATCCGCTTGTGTATGCTGGCATTAAAC
AATGTCATGAGGTTTCAACA

Downstream 100 bases:

>100_bases
ATCACTATAATCATAAGAAGCCGGGCAGCGGTGACTGCCCGGTTTTACTTTTTGATTCCTCAGGGCTCAGGCCAGCACCA
CCTGGCCGTCCGACAGGCTG

Product: aldo/keto reductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 298; Mature: 298

Protein sequence:

>298_residues
MVNRVQLAPQGPEFSRMICGYWRLMEWGMSPQQLLTFIEQHIELGVTTADHADIYGGYVCEQAFGEAMRLKPSLRQSMEL
VSKCGIATTAKPGNPIGHYITDREHIVNSAERSLEHLHTDYLDLLLIHRPDPLMDADEVAEAFVALHKSGKVRHFGVSNF
TTTQFTLLQSRLPFSLVTNQLEISPIHQPAILDGTLDQCQQLRIKPMAWSCLGGGRLFSDAEFQPLRDELQAVALEIGAE
SIEQVVYAWVMRLPSSPLPIIGSGKIERVRSALQAQQLTLSRQQWFRIRKAALGYDVP

Sequences:

>Translated_298_residues
MVNRVQLAPQGPEFSRMICGYWRLMEWGMSPQQLLTFIEQHIELGVTTADHADIYGGYVCEQAFGEAMRLKPSLRQSMEL
VSKCGIATTAKPGNPIGHYITDREHIVNSAERSLEHLHTDYLDLLLIHRPDPLMDADEVAEAFVALHKSGKVRHFGVSNF
TTTQFTLLQSRLPFSLVTNQLEISPIHQPAILDGTLDQCQQLRIKPMAWSCLGGGRLFSDAEFQPLRDELQAVALEIGAE
SIEQVVYAWVMRLPSSPLPIIGSGKIERVRSALQAQQLTLSRQQWFRIRKAALGYDVP
>Mature_298_residues
MVNRVQLAPQGPEFSRMICGYWRLMEWGMSPQQLLTFIEQHIELGVTTADHADIYGGYVCEQAFGEAMRLKPSLRQSMEL
VSKCGIATTAKPGNPIGHYITDREHIVNSAERSLEHLHTDYLDLLLIHRPDPLMDADEVAEAFVALHKSGKVRHFGVSNF
TTTQFTLLQSRLPFSLVTNQLEISPIHQPAILDGTLDQCQQLRIKPMAWSCLGGGRLFSDAEFQPLRDELQAVALEIGAE
SIEQVVYAWVMRLPSSPLPIIGSGKIERVRSALQAQQLTLSRQQWFRIRKAALGYDVP

Specific function: May function as oxidoreductase (Potential) [H]

COG id: COG4989

COG function: function code R; Predicted oxidoreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldo/keto reductase 2 family [H]

Homologues:

Organism=Escherichia coli, GI48994888, Length=298, Percent_Identity=75.503355704698, Blast_Score=486, Evalue=1e-139,
Organism=Escherichia coli, GI87081735, Length=286, Percent_Identity=25.8741258741259, Blast_Score=74, Evalue=8e-15,
Organism=Escherichia coli, GI1786400, Length=251, Percent_Identity=28.6852589641434, Blast_Score=72, Evalue=5e-14,
Organism=Escherichia coli, GI1788081, Length=235, Percent_Identity=32.3404255319149, Blast_Score=70, Evalue=2e-13,
Organism=Saccharomyces cerevisiae, GI6319958, Length=297, Percent_Identity=22.5589225589226, Blast_Score=71, Evalue=2e-13,
Organism=Saccharomyces cerevisiae, GI6323998, Length=308, Percent_Identity=23.0519480519481, Blast_Score=67, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001395
- InterPro:   IPR020471
- InterPro:   IPR023210 [H]

Pfam domain/function: PF00248 Aldo_ket_red [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 33490; Mature: 33490

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVNRVQLAPQGPEFSRMICGYWRLMEWGMSPQQLLTFIEQHIELGVTTADHADIYGGYVC
CCCCEECCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
EQAFGEAMRLKPSLRQSMELVSKCGIATTAKPGNPIGHYITDREHIVNSAERSLEHLHTD
HHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
YLDLLLIHRPDPLMDADEVAEAFVALHKSGKVRHFGVSNFTTTQFTLLQSRLPFSLVTNQ
HHHHHEEECCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHCCHHHHHCC
LEISPIHQPAILDGTLDQCQQLRIKPMAWSCLGGGRLFSDAEFQPLRDELQAVALEIGAE
EEECCCCCCCEECCHHHHHHHCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHH
SIEQVVYAWVMRLPSSPLPIIGSGKIERVRSALQAQQLTLSRQQWFRIRKAALGYDVP
HHHHHHHHHHHHCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MVNRVQLAPQGPEFSRMICGYWRLMEWGMSPQQLLTFIEQHIELGVTTADHADIYGGYVC
CCCCEECCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
EQAFGEAMRLKPSLRQSMELVSKCGIATTAKPGNPIGHYITDREHIVNSAERSLEHLHTD
HHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
YLDLLLIHRPDPLMDADEVAEAFVALHKSGKVRHFGVSNFTTTQFTLLQSRLPFSLVTNQ
HHHHHEEECCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHCCHHHHHCC
LEISPIHQPAILDGTLDQCQQLRIKPMAWSCLGGGRLFSDAEFQPLRDELQAVALEIGAE
EEECCCCCCCEECCHHHHHHHCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHH
SIEQVVYAWVMRLPSSPLPIIGSGKIERVRSALQAQQLTLSRQQWFRIRKAALGYDVP
HHHHHHHHHHHHCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]