| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is pheS [H]
Identifier: 157370388
GI number: 157370388
Start: 2343281
End: 2344264
Strand: Direct
Name: pheS [H]
Synonym: Spro_2148
Alternate gene names: 157370388
Gene position: 2343281-2344264 (Clockwise)
Preceding gene: 157370387
Following gene: 157370389
Centisome position: 43.01
GC content: 54.27
Gene sequence:
>984_bases ATGCCACATCTCGCAGAGCTGGTTGCCAATGCCAAGGCAGCCGTAGAAGATGCCCAGGATGTTGCCGCGTTAGATTTGGT ACGCGTCGAATATTTAGGCAAGAAAGGCCATTTTACCTTACAGATGCAATCGCTGCGTGACGTGCCGGCAGAAGATCGCC CGGCGGCCGGAGCGGTGATCAACCAGGCAAAGCAGGCGGTACAGGAAGCGCTGAACGCGCGTAAGAATGCGCTGGAATCT GCTGCGTTGAATGAGCGTCTGGCGGCAGAAACCATCGACGTTTCTTTGCCGGGCCGTCGTATGGAAAACGGTGGGCTGCA TCCGGTAACCCGTACCATCGACCGAATTGAAGCCTTCTTCGGCGAACTGGGCTTCTCCGTAGAGACCGGGCCTGAGATTG AAGACGACTATCATAACTTCGACGCGCTGAATATTCCGGGTCACCACCCGGCGCGTGCCGATCACGATACCTTCTGGTTC GATGCTACGCGTTTACTGCGTACCCAAACTTCTGGCGTGCAGATCCGCACCATGAAGGAGCAGCAGCCGCCAATCCGCAT TATTGCGCCGGGTCGTGTTTACCGTAATGACTACGATCAGACGCATACTCCGATGTTCCATCAGATGGAAGGCCTGATTG TCGACAAGGACATCAGTTTCACCAACCTGAAGGGCACGCTGCATGATTTCCTGAATAACTTCTTTGAAGAAGATTTGCAG GTTCGTTTCCGTCCTTCTTACTTCCCGTTTACCGAACCTTCCGCTGAAGTGGATGTGATGGGCAAAAATGGCAAGTGGCT GGAAGTTCTGGGCTGCGGCATGGTTCACCCGAACGTGCTGCGCAACGTGGGTATCGATCCGGAAGTTTACTCCGGCTTCG CTTTCGGTATGGGTATGGAGCGTCTGACGATGCTGCGTTACGGCGTTACCGACCTGCGTGCGTTCTTCGAAAACGATCTG CGCTTCCTCAAACAGTTTAAGTAA
Upstream 100 bases:
>100_bases CGGGCTATAACTTAAAATGCTTTGGAGTTGAGCCAAAGGCGTGTTCGAATAATAGATAACAATTACTTAGAGCCATATCG GCCAGAGGAAGAGGAAAGCA
Downstream 100 bases:
>100_bases GGCGGGAATATTACATGAAATTCAGTGAACTCTGGTTGCGCGAGTGGGTAAACCCGGCCATCAGCAGCGAAGCATTATCC GATCAAATTACCATGGCCGG
Product: phenylalanyl-tRNA synthetase subunit alpha
Products: NA
Alternate protein names: Phenylalanine--tRNA ligase alpha chain; PheRS [H]
Number of amino acids: Translated: 327; Mature: 326
Protein sequence:
>327_residues MPHLAELVANAKAAVEDAQDVAALDLVRVEYLGKKGHFTLQMQSLRDVPAEDRPAAGAVINQAKQAVQEALNARKNALES AALNERLAAETIDVSLPGRRMENGGLHPVTRTIDRIEAFFGELGFSVETGPEIEDDYHNFDALNIPGHHPARADHDTFWF DATRLLRTQTSGVQIRTMKEQQPPIRIIAPGRVYRNDYDQTHTPMFHQMEGLIVDKDISFTNLKGTLHDFLNNFFEEDLQ VRFRPSYFPFTEPSAEVDVMGKNGKWLEVLGCGMVHPNVLRNVGIDPEVYSGFAFGMGMERLTMLRYGVTDLRAFFENDL RFLKQFK
Sequences:
>Translated_327_residues MPHLAELVANAKAAVEDAQDVAALDLVRVEYLGKKGHFTLQMQSLRDVPAEDRPAAGAVINQAKQAVQEALNARKNALES AALNERLAAETIDVSLPGRRMENGGLHPVTRTIDRIEAFFGELGFSVETGPEIEDDYHNFDALNIPGHHPARADHDTFWF DATRLLRTQTSGVQIRTMKEQQPPIRIIAPGRVYRNDYDQTHTPMFHQMEGLIVDKDISFTNLKGTLHDFLNNFFEEDLQ VRFRPSYFPFTEPSAEVDVMGKNGKWLEVLGCGMVHPNVLRNVGIDPEVYSGFAFGMGMERLTMLRYGVTDLRAFFENDL RFLKQFK >Mature_326_residues PHLAELVANAKAAVEDAQDVAALDLVRVEYLGKKGHFTLQMQSLRDVPAEDRPAAGAVINQAKQAVQEALNARKNALESA ALNERLAAETIDVSLPGRRMENGGLHPVTRTIDRIEAFFGELGFSVETGPEIEDDYHNFDALNIPGHHPARADHDTFWFD ATRLLRTQTSGVQIRTMKEQQPPIRIIAPGRVYRNDYDQTHTPMFHQMEGLIVDKDISFTNLKGTLHDFLNNFFEEDLQV RFRPSYFPFTEPSAEVDVMGKNGKWLEVLGCGMVHPNVLRNVGIDPEVYSGFAFGMGMERLTMLRYGVTDLRAFFENDLR FLKQFK
Specific function: Unknown
COG id: COG0016
COG function: function code J; Phenylalanyl-tRNA synthetase alpha subunit
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha chain type 1 subfamily [H]
Homologues:
Organism=Homo sapiens, GI5729820, Length=319, Percent_Identity=30.4075235109718, Blast_Score=134, Evalue=9e-32, Organism=Homo sapiens, GI4758340, Length=259, Percent_Identity=32.8185328185328, Blast_Score=127, Evalue=1e-29, Organism=Escherichia coli, GI1788007, Length=327, Percent_Identity=90.2140672782875, Blast_Score=622, Evalue=1e-180, Organism=Caenorhabditis elegans, GI32566635, Length=242, Percent_Identity=33.0578512396694, Blast_Score=131, Evalue=5e-31, Organism=Caenorhabditis elegans, GI17508957, Length=260, Percent_Identity=30.3846153846154, Blast_Score=122, Evalue=3e-28, Organism=Caenorhabditis elegans, GI32563657, Length=260, Percent_Identity=30.3846153846154, Blast_Score=122, Evalue=3e-28, Organism=Saccharomyces cerevisiae, GI6321087, Length=267, Percent_Identity=29.2134831460674, Blast_Score=117, Evalue=2e-27, Organism=Saccharomyces cerevisiae, GI6325304, Length=90, Percent_Identity=41.1111111111111, Blast_Score=88, Evalue=2e-18, Organism=Drosophila melanogaster, GI18858079, Length=258, Percent_Identity=30.6201550387597, Blast_Score=118, Evalue=6e-27, Organism=Drosophila melanogaster, GI17137424, Length=279, Percent_Identity=29.7491039426523, Blast_Score=112, Evalue=5e-25,
Paralogues:
None
Copy number: 2,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006195 - InterPro: IPR004529 - InterPro: IPR004188 - InterPro: IPR022911 - InterPro: IPR002319 - InterPro: IPR010978 [H]
Pfam domain/function: PF02912 Phe_tRNA-synt_N; PF01409 tRNA-synt_2d [H]
EC number: =6.1.1.20 [H]
Molecular weight: Translated: 36918; Mature: 36787
Theoretical pI: Translated: 5.41; Mature: 5.41
Prosite motif: PS50862 AA_TRNA_LIGASE_II
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPHLAELVANAKAAVEDAQDVAALDLVRVEYLGKKGHFTLQMQSLRDVPAEDRPAAGAVI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHCCCCCCCCCHHHHH NQAKQAVQEALNARKNALESAALNERLAAETIDVSLPGRRMENGGLHPVTRTIDRIEAFF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCHHHHHHHHHHHHH GELGFSVETGPEIEDDYHNFDALNIPGHHPARADHDTFWFDATRLLRTQTSGVQIRTMKE HHHCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECC QQPPIRIIAPGRVYRNDYDQTHTPMFHQMEGLIVDKDISFTNLKGTLHDFLNNFFEEDLQ CCCCEEEEECCHHHCCCCCCCCCCHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHHHHHE VRFRPSYFPFTEPSAEVDVMGKNGKWLEVLGCGMVHPNVLRNVGIDPEVYSGFAFGMGME EEECCCCCCCCCCCCCEEEECCCCCEEEEEECCCCCHHHHHHCCCCHHHHCCHHHHCCHH RLTMLRYGVTDLRAFFENDLRFLKQFK HHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PHLAELVANAKAAVEDAQDVAALDLVRVEYLGKKGHFTLQMQSLRDVPAEDRPAAGAVI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHCCCCCCCCCHHHHH NQAKQAVQEALNARKNALESAALNERLAAETIDVSLPGRRMENGGLHPVTRTIDRIEAFF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCHHHHHHHHHHHHH GELGFSVETGPEIEDDYHNFDALNIPGHHPARADHDTFWFDATRLLRTQTSGVQIRTMKE HHHCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECC QQPPIRIIAPGRVYRNDYDQTHTPMFHQMEGLIVDKDISFTNLKGTLHDFLNNFFEEDLQ CCCCEEEEECCHHHCCCCCCCCCCHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHHHHHE VRFRPSYFPFTEPSAEVDVMGKNGKWLEVLGCGMVHPNVLRNVGIDPEVYSGFAFGMGME EEECCCCCCCCCCCCCEEEECCCCCEEEEEECCCCCHHHHHHCCCCHHHHCCHHHHCCHH RLTMLRYGVTDLRAFFENDLRFLKQFK HHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA