| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is 157370298
Identifier: 157370298
GI number: 157370298
Start: 2249893
End: 2250243
Strand: Reverse
Name: 157370298
Synonym: Spro_2056
Alternate gene names: NA
Gene position: 2250243-2249893 (Counterclockwise)
Preceding gene: 157370302
Following gene: 157370294
Centisome position: 41.3
GC content: 54.7
Gene sequence:
>351_bases ATGTCATTTCAAGGTAGCTGTCACTGCGGCGCCGTCACCTTCACGGTGAATGCCGAACTGCCCCATGAGGCTCTAAGTTG CAACTGTTCAATCTGCCGCCGTAAAGGCATGTTGCTGGCGTTTTTCCCGATCGGCAGCTTTGTGCTGAACAGCGGTGAAG GGCTACTTCGCGGTTATACCTTTAACAAACACATCATTCAGCACCAGTTCTGCCAGACCTGCGGTACAGAGGCTTTTGCC TACGGAAAAGGCCCGGACGGTGCCGTAATGTGCGCCGTCAATCTTCGCTGCGTGCCGGAATTGGCGCTAGATTCGTTGAA AATCCATCCGTTTGACGGCGCCAGCGCCTGA
Upstream 100 bases:
>100_bases AATCCATATTCTCTGCGGTTATGTATTCCATGGTCAAATCAACATGGTGAATAAGTGAACTATAATTGGCCGAACTGAGG TTTTCAGCAGGTAGTCGATT
Downstream 100 bases:
>100_bases AAGGCCCAGACAGGAAACAGGCGTGAATCAGCGGAACTCCACCCAGCTGGCACCGGCATCGGCGGAGCGCACACAGTTTT CGACCCAACGCACCCCCATC
Product: glutathione-dependent formaldehyde-activating protein
Products: NA
Alternate protein names: Glutathione-Dependent Formaldehyde-Activating; Glutathione-Dependent Formaldehyde-Activating Protein; Glutathione-Dependent Formaldehyde-Activating Protein GFA; Glutathione-Dependent Formaldehyde-Activating Protein Gfa; Glutathione-Dependent Formaldehyde-Activating Family
Number of amino acids: Translated: 116; Mature: 115
Protein sequence:
>116_residues MSFQGSCHCGAVTFTVNAELPHEALSCNCSICRRKGMLLAFFPIGSFVLNSGEGLLRGYTFNKHIIQHQFCQTCGTEAFA YGKGPDGAVMCAVNLRCVPELALDSLKIHPFDGASA
Sequences:
>Translated_116_residues MSFQGSCHCGAVTFTVNAELPHEALSCNCSICRRKGMLLAFFPIGSFVLNSGEGLLRGYTFNKHIIQHQFCQTCGTEAFA YGKGPDGAVMCAVNLRCVPELALDSLKIHPFDGASA >Mature_115_residues SFQGSCHCGAVTFTVNAELPHEALSCNCSICRRKGMLLAFFPIGSFVLNSGEGLLRGYTFNKHIIQHQFCQTCGTEAFAY GKGPDGAVMCAVNLRCVPELALDSLKIHPFDGASA
Specific function: Unknown
COG id: COG3791
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI56118234, Length=110, Percent_Identity=36.3636363636364, Blast_Score=72, Evalue=1e-13, Organism=Caenorhabditis elegans, GI25149380, Length=109, Percent_Identity=32.1100917431193, Blast_Score=65, Evalue=1e-11, Organism=Caenorhabditis elegans, GI25149382, Length=85, Percent_Identity=35.2941176470588, Blast_Score=63, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12448; Mature: 12316
Theoretical pI: Translated: 7.34; Mature: 7.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
7.8 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 10.3 %Cys+Met (Translated Protein) 7.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 9.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFQGSCHCGAVTFTVNAELPHEALSCNCSICRRKGMLLAFFPIGSFVLNSGEGLLRGYT CCCCCCCCCEEEEEEEECCCCHHHHCCCHHHHCCCCCEEEEECCCEEEEECCCCEEEEEE FNKHIIQHQFCQTCGTEAFAYGKGPDGAVMCAVNLRCVPELALDSLKIHPFDGASA CCHHHHHHHHHHHCCCCEEEECCCCCCEEEEEEECEECCCCCCCCEEECCCCCCCC >Mature Secondary Structure SFQGSCHCGAVTFTVNAELPHEALSCNCSICRRKGMLLAFFPIGSFVLNSGEGLLRGYT CCCCCCCCEEEEEEEECCCCHHHHCCCHHHHCCCCCEEEEECCCEEEEECCCCEEEEEE FNKHIIQHQFCQTCGTEAFAYGKGPDGAVMCAVNLRCVPELALDSLKIHPFDGASA CCHHHHHHHHHHHCCCCEEEECCCCCCEEEEEEECEECCCCCCCCEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA