| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is yfiI [H]
Identifier: 157370297
GI number: 157370297
Start: 2248693
End: 2249865
Strand: Direct
Name: yfiI [H]
Synonym: Spro_2055
Alternate gene names: 157370297
Gene position: 2248693-2249865 (Clockwise)
Preceding gene: 157370296
Following gene: 157370299
Centisome position: 41.27
GC content: 58.14
Gene sequence:
>1173_bases ATGATCAACGGCATTAAACCTTTGGAACGATCCTTGCGCTGGGGGATGGTTGGCGGCGGCGGAACCAGTCAGATTGGTTA TATTCATCGTTCTGCGGCACTGCGCGATGGCACTTTCTCCCTGTTGGCCGGGGCGTTTGATATTGACGCGCAGCGAGGGC GTCTTTTTGGACAGAGCCTGGGGATCGCAGCGGAGCGCTGTTATCCGGATTACGCTACGCTATTTCGCGAAGAGGCTGCC AGAGTGGATGGCATCGAGGCGGTTTCCATTGCCACTCCCAATAATACCCACTTTGCCATCTGCCAGGCGGCACTGGCAGC CGGCCTGCATGTCGTGTGCGAGAAACCGCTGTGTTTCACCGTTGAAGAAGCGCAGGCGCTGGTCGAACTGAGCCAAAAAC AGCATAAAATTATCGGGGTTACCTACGGCTACGCCGGACACCAGTTGATCCTTCAGGCCCGGCAGATGATCGCCGACGGC CTGCTGGGTGAGATCCGCATTATCAACATGCAATTTGCGCACGGATTCCATGCGGCGGCGGTGGAGCTGGATAACCCCAG CACCCGCTGGCGGGTGGATCCCCGTTTTGTCGGCCCCAGCTATGTATTGGGTGATTTGGCGACCCATCCTTTGTTCCTGG CGGAAACCATGGTGCCGCAGCTAAAGGTCAAACGCCTGATGTGCAGCCGCCAGAGTTTTGTCAAAACGCGGGCACCGCTG GAGGACAATGCCTATGTGCTGATGGAGTATGACAATGGTGCCGTTGGCTCCCTATGGTGCTCTGCGGTTAACAGTGGTTC GATGCATGGGCAGAAGGTTCGAGTTGTCGGTGAGAAGGCCAGCCTGGAGTGGTGGGACGAGCAGCCGAACCAACTGCGAT TTGAGGTGCAGGGCGAACCGGTACGCATTCTGGAACGCGGTATGTCCTATCTGGATCCTATAGCCCTGGCGGACGATCGG ATTGGTGGTGGTCATTCGGAGGGGTTGTTTGAAGCCTGGTCGAATCTGTACCGACGCTTTGCCCTGGCGATGGATGCTAC CGATCGGCGGGATCGGGATTTTCTGGCCGATTTTTGGTACCCCGACGTTGCTGCCGGGACGATGGGGGTGCGTTGGGTCG AAAACTGTGTGCGCTCCGCCGATGCCGGTGCCAGCTGGGTGGAGTTCCGCTGA
Upstream 100 bases:
>100_bases AGCAGGAGCGCGACCCACGTCATGCGCAGGGCAGCCTGAGTGATGTAACAGAAAGCCTCAACTATTTACGAACACTCGGT TTTTAATCAGGAGAAACGTG
Downstream 100 bases:
>100_bases TTCACGCCTGTTTCCTGTCTGGGCCTTTCAGGCGCTGGCGCCGTCAAACGGATGGATTTTCAACGAATCTAGCGCCAATT CCGGCACGCAGCGAAGATTG
Product: oxidoreductase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 390; Mature: 390
Protein sequence:
>390_residues MINGIKPLERSLRWGMVGGGGTSQIGYIHRSAALRDGTFSLLAGAFDIDAQRGRLFGQSLGIAAERCYPDYATLFREEAA RVDGIEAVSIATPNNTHFAICQAALAAGLHVVCEKPLCFTVEEAQALVELSQKQHKIIGVTYGYAGHQLILQARQMIADG LLGEIRIINMQFAHGFHAAAVELDNPSTRWRVDPRFVGPSYVLGDLATHPLFLAETMVPQLKVKRLMCSRQSFVKTRAPL EDNAYVLMEYDNGAVGSLWCSAVNSGSMHGQKVRVVGEKASLEWWDEQPNQLRFEVQGEPVRILERGMSYLDPIALADDR IGGGHSEGLFEAWSNLYRRFALAMDATDRRDRDFLADFWYPDVAAGTMGVRWVENCVRSADAGASWVEFR
Sequences:
>Translated_390_residues MINGIKPLERSLRWGMVGGGGTSQIGYIHRSAALRDGTFSLLAGAFDIDAQRGRLFGQSLGIAAERCYPDYATLFREEAA RVDGIEAVSIATPNNTHFAICQAALAAGLHVVCEKPLCFTVEEAQALVELSQKQHKIIGVTYGYAGHQLILQARQMIADG LLGEIRIINMQFAHGFHAAAVELDNPSTRWRVDPRFVGPSYVLGDLATHPLFLAETMVPQLKVKRLMCSRQSFVKTRAPL EDNAYVLMEYDNGAVGSLWCSAVNSGSMHGQKVRVVGEKASLEWWDEQPNQLRFEVQGEPVRILERGMSYLDPIALADDR IGGGHSEGLFEAWSNLYRRFALAMDATDRRDRDFLADFWYPDVAAGTMGVRWVENCVRSADAGASWVEFR >Mature_390_residues MINGIKPLERSLRWGMVGGGGTSQIGYIHRSAALRDGTFSLLAGAFDIDAQRGRLFGQSLGIAAERCYPDYATLFREEAA RVDGIEAVSIATPNNTHFAICQAALAAGLHVVCEKPLCFTVEEAQALVELSQKQHKIIGVTYGYAGHQLILQARQMIADG LLGEIRIINMQFAHGFHAAAVELDNPSTRWRVDPRFVGPSYVLGDLATHPLFLAETMVPQLKVKRLMCSRQSFVKTRAPL EDNAYVLMEYDNGAVGSLWCSAVNSGSMHGQKVRVVGEKASLEWWDEQPNQLRFEVQGEPVRILERGMSYLDPIALADDR IGGGHSEGLFEAWSNLYRRFALAMDATDRRDRDFLADFWYPDVAAGTMGVRWVENCVRSADAGASWVEFR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gfo/idh/mocA family [H]
Homologues:
Organism=Escherichia coli, GI87081947, Length=88, Percent_Identity=34.0909090909091, Blast_Score=64, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016040 - InterPro: IPR000683 - InterPro: IPR004104 [H]
Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 43186; Mature: 43186
Theoretical pI: Translated: 6.19; Mature: 6.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINGIKPLERSLRWGMVGGGGTSQIGYIHRSAALRDGTFSLLAGAFDIDAQRGRLFGQSL CCCCCCHHHHHHHCCEECCCCCCCHHEEEHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHC GIAAERCYPDYATLFREEAARVDGIEAVSIATPNNTHFAICQAALAAGLHVVCEKPLCFT CCHHHHCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHCCCCEEECCCCEEE VEEAQALVELSQKQHKIIGVTYGYAGHQLILQARQMIADGLLGEIRIINMQFAHGFHAAA HHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCEEEE VELDNPSTRWRVDPRFVGPSYVLGDLATHPLFLAETMVPQLKVKRLMCSRQSFVKTRAPL EEECCCCCEEEECCEECCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC EDNAYVLMEYDNGAVGSLWCSAVNSGSMHGQKVRVVGEKASLEWWDEQPNQLRFEVQGEP CCCCEEEEEECCCCHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEECCCH VRILERGMSYLDPIALADDRIGGGHSEGLFEAWSNLYRRFALAMDATDRRDRDFLADFWY HHHHHHHHHHHCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCC PDVAAGTMGVRWVENCVRSADAGASWVEFR CCHHCCHHHHHHHHHHHHCCCCCCCEEECC >Mature Secondary Structure MINGIKPLERSLRWGMVGGGGTSQIGYIHRSAALRDGTFSLLAGAFDIDAQRGRLFGQSL CCCCCCHHHHHHHCCEECCCCCCCHHEEEHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHC GIAAERCYPDYATLFREEAARVDGIEAVSIATPNNTHFAICQAALAAGLHVVCEKPLCFT CCHHHHCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHCCCCEEECCCCEEE VEEAQALVELSQKQHKIIGVTYGYAGHQLILQARQMIADGLLGEIRIINMQFAHGFHAAA HHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCEEEE VELDNPSTRWRVDPRFVGPSYVLGDLATHPLFLAETMVPQLKVKRLMCSRQSFVKTRAPL EEECCCCCEEEECCEECCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC EDNAYVLMEYDNGAVGSLWCSAVNSGSMHGQKVRVVGEKASLEWWDEQPNQLRFEVQGEP CCCCEEEEEECCCCHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEECCCH VRILERGMSYLDPIALADDRIGGGHSEGLFEAWSNLYRRFALAMDATDRRDRDFLADFWY HHHHHHHHHHHCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCC PDVAAGTMGVRWVENCVRSADAGASWVEFR CCHHCCHHHHHHHHHHHHCCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8973323; 9384377 [H]