Click here to switch to the map view.

The map label for this gene is sdpR [H]

Identifier: 157370218

GI number: 157370218

Start: 2163774

End: 2164088

Strand: Direct

Name: sdpR [H]

Synonym: Spro_1976

Alternate gene names: 157370218

Gene position: 2163774-2164088 (Clockwise)

Preceding gene: 157370217

Following gene: 157370219

Centisome position: 39.71

GC content: 55.56

Gene sequence:

>315_bases
ATGAATGAAAATGACATCTTCAAGGCACTGGCGGATCCCACCCGTCGCACCATCTTCGAGAAACTGGCGGCTGGCGGCAT
GAATGCCAGTGCGCTGCGTGAAGGTATGCCGATCAGCCAATCGGCCATGTCCCAGCATCTGGCAGTGTTGCGGCAGGCGG
GCCTGGTGTGCGAGGAGCGACAAGGGCGTTTCGTTAATTATCAGGTGGACCCGCAGGGCCTGGCATTGATTGCTCAATGG
CTGGACAAATACCGTGCCTTCTGGCCGGAGCGCATCGATAAGCTGAATATTTTGCTCAAGGATATGGATCAATGA

Upstream 100 bases:

>100_bases
TCGGCGCTCGCTGAGGGGTTTTAATGGCGGCTCGGATAAGCGCCATTCTCATTACCCCGATAAACTTGCGCATTAGATAA
GTGACGACTAATGTTTAGTC

Downstream 100 bases:

>100_bases
ACCAGACCGACGCTAACCCGCAGCCGCTAGTGCTGGAATATTCACTCGATGCGCCGCCCGAAAAAGTCTGGCGGGCGATT
GGCATCCCGGCATTGCGCGA

Product: ArsR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 104; Mature: 104

Protein sequence:

>104_residues
MNENDIFKALADPTRRTIFEKLAAGGMNASALREGMPISQSAMSQHLAVLRQAGLVCEERQGRFVNYQVDPQGLALIAQW
LDKYRAFWPERIDKLNILLKDMDQ

Sequences:

>Translated_104_residues
MNENDIFKALADPTRRTIFEKLAAGGMNASALREGMPISQSAMSQHLAVLRQAGLVCEERQGRFVNYQVDPQGLALIAQW
LDKYRAFWPERIDKLNILLKDMDQ
>Mature_104_residues
MNENDIFKALADPTRRTIFEKLAAGGMNASALREGMPISQSAMSQHLAVLRQAGLVCEERQGRFVNYQVDPQGLALIAQW
LDKYRAFWPERIDKLNILLKDMDQ

Specific function: Represses the transcription of the sdpIR operon and of several other operons that probably contribute to delaying commitment to sporulation [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH arsR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001845
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01022 HTH_5 [H]

EC number: NA

Molecular weight: Translated: 11836; Mature: 11836

Theoretical pI: Translated: 7.36; Mature: 7.36

Prosite motif: PS50987 HTH_ARSR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNENDIFKALADPTRRTIFEKLAAGGMNASALREGMPISQSAMSQHLAVLRQAGLVCEER
CCCHHHHHHHHCHHHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHCC
QGRFVNYQVDPQGLALIAQWLDKYRAFWPERIDKLNILLKDMDQ
CCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNENDIFKALADPTRRTIFEKLAAGGMNASALREGMPISQSAMSQHLAVLRQAGLVCEER
CCCHHHHHHHHCHHHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHCC
QGRFVNYQVDPQGLALIAQWLDKYRAFWPERIDKLNILLKDMDQ
CCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]