| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is ygjJ [H]
Identifier: 157370213
GI number: 157370213
Start: 2155886
End: 2156965
Strand: Reverse
Name: ygjJ [H]
Synonym: Spro_1971
Alternate gene names: 157370213
Gene position: 2156965-2155886 (Counterclockwise)
Preceding gene: 157370221
Following gene: 157370212
Centisome position: 39.59
GC content: 55.74
Gene sequence:
>1080_bases ATGCGTGTCCAAATGAAAATAATAGCCAATAATAGATTTTTACCCGTTTTACTTCTGATTTTACCCCTGGAACTGCCGGC GCAAGAGTCCGTGGTGCCGGCGGAACATAACGAGCTGCCGCCCCCCAAACTGACAACCACCGCCGCTACCGCCCTGCGCT TTTACGGTGAGCTGGGCATCGGTGGCAGCGTCTATCTCAACGGTGAACACCAACACAAATACAGTGACGGTACCTATATC GAAGGCGGGCTGGAGATCAAACACGGCCATTGGTTCGGCCTGATCTACGGCGAAGGCTGGACGGTGCAGGCGGATCATCA GGGCAATGCCTGGGTGCCAGACCACTGTTGGGGTGGATTTGAAGGCGGCATCAACCGTTTTTACGGCGGCTATCGCACCG ATGACGGCACCGAAATGATGCTTAGCGTACGCAACGACTCCTCGCTGGACGATTTACAATGGTGGGCCGACTTTACCCCG GAATATGGCTATGTGATCCCCAACACCCGGGATCTCTCCTACGCGGCCAAACTGCAGAATCTGACCGGAAAATTCCGTTA CAGCGTCACCGCCGCACCGGAAAGCCGCATCGACGAAAGTAAGGCGTTACTGCACTTCGGTAAATATGACCGCTACTCGG ACAAATATACCTACCGTGCCATGGTCAACGGCTATACCCAATACGATCTGCAGGAAGAACTGACGTTATTAAACGGCCTG GAAATTACCGACGGCATGGGGCAACTGTACCTCCTGGGGCTAAAAGGTAAAAACCTGGCCGGCCGCGTCTGGCACCACAC CGGCAAGGGCGATGGCAGCCACCCGGGCACCGAGTCGGGCCTGATGTTAAGCGCCATGGTTGAAGCCACCAAAGGGCTGT ATTTCTCGACCGCCTACAGCTACGCCCGCCACCGGCTGGACAATGCGCCGGACACCGCCACGTCTTACGCGCAGGCCGGT ATCTGGTACGAGTATGGCGACGGCAAATTCGCCACCGCGCTGGACAGTAAATTCTATATGACCAACGACAGCACCGACGC CAGCAACTCGGTGTTTCTGATGCAGTATTTCTATTGGTAA
Upstream 100 bases:
>100_bases TTTTTACCTCCTCCCAGGGAAAAGGGGCCGACCTACATGCGGTTAATGGAATGAATTGGCAGGTGTCACGCCGTGCCGAA CGTCCACTAACCAAAAACAG
Downstream 100 bases:
>100_bases CCGACAGGGCAATCCTAATGAATATGATTAATAAACTGCCGCCTTTGGCCATAGCTATCACGCTGGCAATATCAGGCTGC TCTTCTCACCCGGCGAATGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 359; Mature: 359
Protein sequence:
>359_residues MRVQMKIIANNRFLPVLLLILPLELPAQESVVPAEHNELPPPKLTTTAATALRFYGELGIGGSVYLNGEHQHKYSDGTYI EGGLEIKHGHWFGLIYGEGWTVQADHQGNAWVPDHCWGGFEGGINRFYGGYRTDDGTEMMLSVRNDSSLDDLQWWADFTP EYGYVIPNTRDLSYAAKLQNLTGKFRYSVTAAPESRIDESKALLHFGKYDRYSDKYTYRAMVNGYTQYDLQEELTLLNGL EITDGMGQLYLLGLKGKNLAGRVWHHTGKGDGSHPGTESGLMLSAMVEATKGLYFSTAYSYARHRLDNAPDTATSYAQAG IWYEYGDGKFATALDSKFYMTNDSTDASNSVFLMQYFYW
Sequences:
>Translated_359_residues MRVQMKIIANNRFLPVLLLILPLELPAQESVVPAEHNELPPPKLTTTAATALRFYGELGIGGSVYLNGEHQHKYSDGTYI EGGLEIKHGHWFGLIYGEGWTVQADHQGNAWVPDHCWGGFEGGINRFYGGYRTDDGTEMMLSVRNDSSLDDLQWWADFTP EYGYVIPNTRDLSYAAKLQNLTGKFRYSVTAAPESRIDESKALLHFGKYDRYSDKYTYRAMVNGYTQYDLQEELTLLNGL EITDGMGQLYLLGLKGKNLAGRVWHHTGKGDGSHPGTESGLMLSAMVEATKGLYFSTAYSYARHRLDNAPDTATSYAQAG IWYEYGDGKFATALDSKFYMTNDSTDASNSVFLMQYFYW >Mature_359_residues MRVQMKIIANNRFLPVLLLILPLELPAQESVVPAEHNELPPPKLTTTAATALRFYGELGIGGSVYLNGEHQHKYSDGTYI EGGLEIKHGHWFGLIYGEGWTVQADHQGNAWVPDHCWGGFEGGINRFYGGYRTDDGTEMMLSVRNDSSLDDLQWWADFTP EYGYVIPNTRDLSYAAKLQNLTGKFRYSVTAAPESRIDESKALLHFGKYDRYSDKYTYRAMVNGYTQYDLQEELTLLNGL EITDGMGQLYLLGLKGKNLAGRVWHHTGKGDGSHPGTESGLMLSAMVEATKGLYFSTAYSYARHRLDNAPDTATSYAQAG IWYEYGDGKFATALDSKFYMTNDSTDASNSVFLMQYFYW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789461, Length=357, Percent_Identity=67.7871148459384, Blast_Score=494, Evalue=1e-141,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40356; Mature: 40356
Theoretical pI: Translated: 5.36; Mature: 5.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVQMKIIANNRFLPVLLLILPLELPAQESVVPAEHNELPPPKLTTTAATALRFYGELGI CEEEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC GGSVYLNGEHQHKYSDGTYIEGGLEIKHGHWFGLIYGEGWTVQADHQGNAWVPDHCWGGF CCEEEECCCCCCCCCCCCEEECCEEEECCEEEEEEECCCEEEEECCCCCCCCCCCCCCCC EGGINRFYGGYRTDDGTEMMLSVRNDSSLDDLQWWADFTPEYGYVIPNTRDLSYAAKLQN CCCHHHHCCCEECCCCCEEEEEECCCCCHHHHHHHHCCCCCCCEECCCCCCCHHHHHHHH LTGKFRYSVTAAPESRIDESKALLHFGKYDRYSDKYTYRAMVNGYTQYDLQEELTLLNGL CCCEEEEEEEECCHHHCCHHHHHEEECCCCCCCCCEEEEEEECCCEEECHHHHHHHHCCC EITDGMGQLYLLGLKGKNLAGRVWHHTGKGDGSHPGTESGLMLSAMVEATKGLYFSTAYS EEECCCCEEEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCEEEEHHHH YARHRLDNAPDTATSYAQAGIWYEYGDGKFATALDSKFYMTNDSTDASNSVFLMQYFYW HHHHHCCCCCCCHHHHHHCCCEEEECCCEEEEEECCEEEEECCCCCCCCCEEEEEEECC >Mature Secondary Structure MRVQMKIIANNRFLPVLLLILPLELPAQESVVPAEHNELPPPKLTTTAATALRFYGELGI CEEEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC GGSVYLNGEHQHKYSDGTYIEGGLEIKHGHWFGLIYGEGWTVQADHQGNAWVPDHCWGGF CCEEEECCCCCCCCCCCCEEECCEEEECCEEEEEEECCCEEEEECCCCCCCCCCCCCCCC EGGINRFYGGYRTDDGTEMMLSVRNDSSLDDLQWWADFTPEYGYVIPNTRDLSYAAKLQN CCCHHHHCCCEECCCCCEEEEEECCCCCHHHHHHHHCCCCCCCEECCCCCCCHHHHHHHH LTGKFRYSVTAAPESRIDESKALLHFGKYDRYSDKYTYRAMVNGYTQYDLQEELTLLNGL CCCEEEEEEEECCHHHCCHHHHHEEECCCCCCCCCEEEEEEECCCEEECHHHHHHHHCCC EITDGMGQLYLLGLKGKNLAGRVWHHTGKGDGSHPGTESGLMLSAMVEATKGLYFSTAYS EEECCCCEEEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCEEEEHHHH YARHRLDNAPDTATSYAQAGIWYEYGDGKFATALDSKFYMTNDSTDASNSVFLMQYFYW HHHHHCCCCCCCHHHHHHCCCEEEECCCEEEEEECCEEEEECCCCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]