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The map label for this gene is rbsC [H]

Identifier: 157370205

GI number: 157370205

Start: 2145185

End: 2146213

Strand: Direct

Name: rbsC [H]

Synonym: Spro_1963

Alternate gene names: 157370205

Gene position: 2145185-2146213 (Clockwise)

Preceding gene: 157370204

Following gene: 157370206

Centisome position: 39.37

GC content: 58.31

Gene sequence:

>1029_bases
ATGAGTAATGTAAAAATCGAGAAGCCGCTTGCGGGTAAAGCGCCGCTGTTCGCTGGCCTGAGTGGCAAAATGCCGAAAGA
CACCGGCATCTTTATCGTGATGATCGGCATCGCGTTGGTGTTTGAAATTCTTGGCTGGTACATCCGCGACCAGTCCTTCC
TGATGAACCCTAACCGCCTGCTGCTGATTGTGCTGCAGGTGGCGATTATCGGCATCATCGCGGTGGGGGTGACCCAGGTC
ATCATCACCACCGGCATCGATCTTTCCTCCGGCTCGCTGATAGCCCTGACGGCTGTGGTGGCGGCCAGCCTGGCGCAAAC
CTCGGACAGTATTTCACCGATGTACCCGGCGTTGCTCGACCTGCCGGCGGCGATCCCGATCGGCGCGGGGATCGGGGTGG
GCATTATCTGCGGTTTCATCAACGGCTTCCTGATTACCCGCACCGGCATCCCACCGTTTATCGCAACTCTGGGCATGATG
GTTTCGGCGCGTGGCCTGGCGCAGTATTACACCCAGGGTAACCCGGTCAGCTTCCTGTCCGACGGCTTTACCTCTATCGG
CCAGGGCGCGATGCCGGTGATCATCTTCCTGGTGATTGCGGTGATCTTCCACATTGCGTTGAAACACACCCGTTACGGTA
AGTACATCTACGCCATCGGCGGCAACATGACGTCGGCCAGAGTCTCCGGCATCAACGTCAATAAATACCTGGTGACGGTC
TATACCATCGCCGGTGGCCTGGCAGGGCTGGCAGGTGTGGTATTGGCGGCGCGCGTCAGCAGCGGCCAGTCGAGCATGGG
GATGTCTTACGAGCTGGATGCCATCGCCGCGGCGGTGATCGGCGGCAGCAGCCTGATGGGCGGCGTTGGGCGCATTACCG
GCACATTGATTGGCGCGGTGATCCTCGGGCTGATTAAAAGCGGCTTCACCTTTATCGGCGTAGACTCCTATATTCAGGAC
ATTATCAAAGGCGTGATTATCGTCGCCGCCGTGTCTATCGACATGCGCCGTAACCGTAAAAAACACTGA

Upstream 100 bases:

>100_bases
TGATGCACGGCGGCCGTATTACCGGCATTTTGGATAAAGAAGAAGCGGATCAGGAAAAAATCCTGGCGCTGGCCTCTGAA
TAACGCAAAGGTGAATCCCC

Downstream 100 bases:

>100_bases
TTGCCGTAAATCTCCGCCGGTGCACTTTGCCCGGCGGTTTTTTTTATCTCAGGGGAATCACCATGAAATACTTAAAAAGA
ATCGTACTGGTGGCGGCGCT

Product: monosaccharide-transporting ATPase

Products: ADP; phosphate; ribose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 342; Mature: 341

Protein sequence:

>342_residues
MSNVKIEKPLAGKAPLFAGLSGKMPKDTGIFIVMIGIALVFEILGWYIRDQSFLMNPNRLLLIVLQVAIIGIIAVGVTQV
IITTGIDLSSGSLIALTAVVAASLAQTSDSISPMYPALLDLPAAIPIGAGIGVGIICGFINGFLITRTGIPPFIATLGMM
VSARGLAQYYTQGNPVSFLSDGFTSIGQGAMPVIIFLVIAVIFHIALKHTRYGKYIYAIGGNMTSARVSGINVNKYLVTV
YTIAGGLAGLAGVVLAARVSSGQSSMGMSYELDAIAAAVIGGSSLMGGVGRITGTLIGAVILGLIKSGFTFIGVDSYIQD
IIKGVIIVAAVSIDMRRNRKKH

Sequences:

>Translated_342_residues
MSNVKIEKPLAGKAPLFAGLSGKMPKDTGIFIVMIGIALVFEILGWYIRDQSFLMNPNRLLLIVLQVAIIGIIAVGVTQV
IITTGIDLSSGSLIALTAVVAASLAQTSDSISPMYPALLDLPAAIPIGAGIGVGIICGFINGFLITRTGIPPFIATLGMM
VSARGLAQYYTQGNPVSFLSDGFTSIGQGAMPVIIFLVIAVIFHIALKHTRYGKYIYAIGGNMTSARVSGINVNKYLVTV
YTIAGGLAGLAGVVLAARVSSGQSSMGMSYELDAIAAAVIGGSSLMGGVGRITGTLIGAVILGLIKSGFTFIGVDSYIQD
IIKGVIIVAAVSIDMRRNRKKH
>Mature_341_residues
SNVKIEKPLAGKAPLFAGLSGKMPKDTGIFIVMIGIALVFEILGWYIRDQSFLMNPNRLLLIVLQVAIIGIIAVGVTQVI
ITTGIDLSSGSLIALTAVVAASLAQTSDSISPMYPALLDLPAAIPIGAGIGVGIICGFINGFLITRTGIPPFIATLGMMV
SARGLAQYYTQGNPVSFLSDGFTSIGQGAMPVIIFLVIAVIFHIALKHTRYGKYIYAIGGNMTSARVSGINVNKYLVTVY
TIAGGLAGLAGVVLAARVSSGQSSMGMSYELDAIAAAVIGGSSLMGGVGRITGTLIGAVILGLIKSGFTFIGVDSYIQDI
IKGVIIVAAVSIDMRRNRKKH

Specific function: Part of the binding-protein-dependent transport system for ribose. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790191, Length=290, Percent_Identity=43.7931034482759, Blast_Score=194, Evalue=5e-51,
Organism=Escherichia coli, GI1788471, Length=283, Percent_Identity=39.9293286219081, Blast_Score=161, Evalue=6e-41,
Organism=Escherichia coli, GI1790524, Length=288, Percent_Identity=34.7222222222222, Blast_Score=145, Evalue=3e-36,
Organism=Escherichia coli, GI1788896, Length=354, Percent_Identity=29.6610169491525, Blast_Score=139, Evalue=3e-34,
Organism=Escherichia coli, GI145693152, Length=283, Percent_Identity=31.4487632508834, Blast_Score=130, Evalue=2e-31,
Organism=Escherichia coli, GI87082395, Length=289, Percent_Identity=36.6782006920415, Blast_Score=128, Evalue=6e-31,
Organism=Escherichia coli, GI1789992, Length=395, Percent_Identity=29.620253164557, Blast_Score=122, Evalue=4e-29,
Organism=Escherichia coli, GI145693214, Length=259, Percent_Identity=34.3629343629344, Blast_Score=111, Evalue=8e-26,
Organism=Escherichia coli, GI1787794, Length=303, Percent_Identity=29.3729372937294, Blast_Score=102, Evalue=5e-23,
Organism=Escherichia coli, GI1787793, Length=317, Percent_Identity=28.0757097791798, Blast_Score=77, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 35495; Mature: 35364

Theoretical pI: Translated: 10.15; Mature: 10.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNVKIEKPLAGKAPLFAGLSGKMPKDTGIFIVMIGIALVFEILGWYIRDQSFLMNPNRL
CCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHEECCCHH
LLIVLQVAIIGIIAVGVTQVIITTGIDLSSGSLIALTAVVAASLAQTSDSISPMYPALLD
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHC
LPAAIPIGAGIGVGIICGFINGFLITRTGIPPFIATLGMMVSARGLAQYYTQGNPVSFLS
CCCCCCCCCCHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
DGFTSIGQGAMPVIIFLVIAVIFHIALKHTRYGKYIYAIGGNMTSARVSGINVNKYLVTV
CCHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEECCCCCCHHHHHH
YTIAGGLAGLAGVVLAARVSSGQSSMGMSYELDAIAAAVIGGSSLMGGVGRITGTLIGAV
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHCCHHHHCHHHHHHHHHHHHH
ILGLIKSGFTFIGVDSYIQDIIKGVIIVAAVSIDMRRNRKKH
HHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SNVKIEKPLAGKAPLFAGLSGKMPKDTGIFIVMIGIALVFEILGWYIRDQSFLMNPNRL
CCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHEECCCHH
LLIVLQVAIIGIIAVGVTQVIITTGIDLSSGSLIALTAVVAASLAQTSDSISPMYPALLD
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHC
LPAAIPIGAGIGVGIICGFINGFLITRTGIPPFIATLGMMVSARGLAQYYTQGNPVSFLS
CCCCCCCCCCHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
DGFTSIGQGAMPVIIFLVIAVIFHIALKHTRYGKYIYAIGGNMTSARVSGINVNKYLVTV
CCHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEECCCCCCHHHHHH
YTIAGGLAGLAGVVLAARVSSGQSSMGMSYELDAIAAAVIGGSSLMGGVGRITGTLIGAV
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHCCHHHHCHHHHHHHHHHHHH
ILGLIKSGFTFIGVDSYIQDIIKGVIIVAAVSIDMRRNRKKH
HHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; ribose [Periplasm]; H2O [C]

Specific reaction: ATP + ribose [Periplasm] + H2O = ADP + phosphate + ribose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7921236; 9353933; 9384377 [H]