| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is yceF1 [H]
Identifier: 157370142
GI number: 157370142
Start: 2085655
End: 2086275
Strand: Reverse
Name: yceF1 [H]
Synonym: Spro_1900
Alternate gene names: 157370142
Gene position: 2086275-2085655 (Counterclockwise)
Preceding gene: 157370157
Following gene: 157370140
Centisome position: 38.29
GC content: 56.52
Gene sequence:
>621_bases ATGCCTACTCTATTTACGCTACGGTTTACGAAAAAAATTATGCAAAGACTCCTGCTTGCCTCCACCTCGACCTACCGCAA GATGCTATTGGAAAAACTGCATCTGCCTTTTATCTGTGATGCTCCCCAGGTCGATGAAGCCCCACTGGCCGGGGAAAGCG CCGAAGCGCTGGTGCTGCGATTGGCAACGGCAAAGGCCCAGGCATTGGCCGCCGCCTACCCCGACCACCTGATTATCGGC TCCGATCAGGTCTGCGTGATCGACGGTAAAATCACCGGAAAACCACACACCGCAGAAAATGCCCGCGCGCAATTACGCCA GGCCAGCGGCCAAAGGGTCACCTTTTATACCGGCCTGGCGTTATACAACAGCCATAGCCAACACCTGCAGGTGCTTTGCG AACCCTTCCACGTGCACTTCCGTGCGCTGAGTGACGCTGAAATCGCCGCCTATATCCGCCTTGAGCAACCGCTCAACTGC GCAGGCAGCTTTAAAAGTGAAGGTTTGGGCATCGCGCTGTTCGACAAACTGGAGGGACGGGATCCGAATGCGTTGATCGG CCTGCCGCTGATCGCACTGCTGGAGATGCTGCGGGCTGAAGGCATCAACCCGCTGGGATAA
Upstream 100 bases:
>100_bases GGCGCGCATATTAACTTTGTAACGACTTAGAGTCAAAGAAAAAGGCCGTAAAACGGCACCTTTCACCAATATTCGCTTCC TCAGCGGCGGACAGTTTAAA
Downstream 100 bases:
>100_bases ATAGGGTTTACTGCTGTTTGGACTGCTTGCGCAATACCTGCAGGCAGTGGCGCAATTCTGCGTCCATCGGGGCTTCGATA CGCATGGTTTCGCCGGTGCC
Product: maf protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 206; Mature: 205
Protein sequence:
>206_residues MPTLFTLRFTKKIMQRLLLASTSTYRKMLLEKLHLPFICDAPQVDEAPLAGESAEALVLRLATAKAQALAAAYPDHLIIG SDQVCVIDGKITGKPHTAENARAQLRQASGQRVTFYTGLALYNSHSQHLQVLCEPFHVHFRALSDAEIAAYIRLEQPLNC AGSFKSEGLGIALFDKLEGRDPNALIGLPLIALLEMLRAEGINPLG
Sequences:
>Translated_206_residues MPTLFTLRFTKKIMQRLLLASTSTYRKMLLEKLHLPFICDAPQVDEAPLAGESAEALVLRLATAKAQALAAAYPDHLIIG SDQVCVIDGKITGKPHTAENARAQLRQASGQRVTFYTGLALYNSHSQHLQVLCEPFHVHFRALSDAEIAAYIRLEQPLNC AGSFKSEGLGIALFDKLEGRDPNALIGLPLIALLEMLRAEGINPLG >Mature_205_residues PTLFTLRFTKKIMQRLLLASTSTYRKMLLEKLHLPFICDAPQVDEAPLAGESAEALVLRLATAKAQALAAAYPDHLIIGS DQVCVIDGKITGKPHTAENARAQLRQASGQRVTFYTGLALYNSHSQHLQVLCEPFHVHFRALSDAEIAAYIRLEQPLNCA GSFKSEGLGIALFDKLEGRDPNALIGLPLIALLEMLRAEGINPLG
Specific function: Unknown
COG id: COG0424
COG function: function code D; Nucleotide-binding protein implicated in inhibition of septum formation
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the maf family [H]
Homologues:
Organism=Escherichia coli, GI87081830, Length=192, Percent_Identity=69.2708333333333, Blast_Score=273, Evalue=7e-75, Organism=Escherichia coli, GI1789646, Length=185, Percent_Identity=36.2162162162162, Blast_Score=100, Evalue=8e-23, Organism=Caenorhabditis elegans, GI193202443, Length=192, Percent_Identity=29.6875, Blast_Score=74, Evalue=5e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003697 [H]
Pfam domain/function: PF02545 Maf [H]
EC number: NA
Molecular weight: Translated: 22499; Mature: 22368
Theoretical pI: Translated: 7.58; Mature: 7.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTLFTLRFTKKIMQRLLLASTSTYRKMLLEKLHLPFICDAPQVDEAPLAGESAEALVLR CCCEEEHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCHHHHHHH LATAKAQALAAAYPDHLIIGSDQVCVIDGKITGKPHTAENARAQLRQASGQRVTFYTGLA HHHHHHHHHHHCCCCEEEECCCCEEEEECEECCCCCCCHHHHHHHHHCCCCEEEEEEEEE LYNSHSQHLQVLCEPFHVHFRALSDAEIAAYIRLEQPLNCAGSFKSEGLGIALFDKLEGR EECCCHHHHHHHHHHHHHEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEECCCCC DPNALIGLPLIALLEMLRAEGINPLG CCCEEEHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure PTLFTLRFTKKIMQRLLLASTSTYRKMLLEKLHLPFICDAPQVDEAPLAGESAEALVLR CCEEEHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCHHHHHHH LATAKAQALAAAYPDHLIIGSDQVCVIDGKITGKPHTAENARAQLRQASGQRVTFYTGLA HHHHHHHHHHHCCCCEEEECCCCEEEEECEECCCCCCCHHHHHHHHHCCCCEEEEEEEEE LYNSHSQHLQVLCEPFHVHFRALSDAEIAAYIRLEQPLNCAGSFKSEGLGIALFDKLEGR EECCCHHHHHHHHHHHHHEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEECCCCC DPNALIGLPLIALLEMLRAEGINPLG CCCEEEHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA