Definition Serratia proteamaculans 568 chromosome, complete genome.
Accession NC_009832
Length 5,448,853

Click here to switch to the map view.

The map label for this gene is yceA [C]

Identifier: 157370128

GI number: 157370128

Start: 2071749

End: 2072819

Strand: Direct

Name: yceA [C]

Synonym: Spro_1886

Alternate gene names: 157370128

Gene position: 2071749-2072819 (Clockwise)

Preceding gene: 157370122

Following gene: 157370131

Centisome position: 38.02

GC content: 51.91

Gene sequence:

>1071_bases
ATGCCAGTGTTACATAACCGAATTTCTAATGAGGAACTGAAGGCGCGCATGCTGGCGGAAACCGAGCCGCGCACCACAGT
TTCTTTTTATAAATACTTCACCATCGAAGATCCCAAAGCGTTTCGCGACAGCCTGTACGTTCAGTTCGACAAGCTGAAGG
TGTTCGGCCGCATTTATGTGGCGAAAGAGGGGATCAACGCGCAAATCAGCGTGCCGCAGAATAAATTCGAGGCGTTCAAA
GCCGCACTCTTTGCCTCACATCCGGCGCTGGACCAGGTTCGGCTGAATATCGCCCTGGAAGACGATGGAAAATCCTTCTG
GGTGCTGCGCCTGAAAGTGCGTGAACGCATCGTTGCCGACGGCCTCGATGACGAGAGCTTCAACCCGGCGAACGTCGGTG
AGTATCTGCAGGCCGATCGCGTTAACCAGATGATTGACGATCCGGATACGCTGTTTGTCGATATGCGTAACCATTACGAA
TATGAAGTCGGCCACTTTGAAAACGCCATCGAAGTGCCGTCGGACACTTTCCGTGATCAACTGCCGATGGCGGTTGAGAT
GCTGCAGGACAATAAAGACAAAAATATTGTCATGTACTGCACCGGCGGGATCCGCTGTGAAAAAGCCAGTGCCTATATGT
TGCATAACGGCTTCAAGAACGTCTATCACGTGGAAGGCGGCATTATCGAGTATGCGCGTAAGGCAAAAGAACAGGGGTTG
CCGCTGAAGTTTGTTGGCAAAAACTTTGTGTTTGACGAGCGTATGGGCGAGCGAATTTCTGACGATGTGATCGCCAATTG
TCATCAGTGCGGTGCGCCTTGCGATACTCACACCAACTGCCTGAATGACGGCTGTCACCTGTTGTTTATTCAGTGCCCGA
GCTGTGCGGCCAAATTTGAAGGTTGCTGCAGCGAGATCTGCCGCGAAGAGCTGAAGTTGCCGCGTGAAGAACAGCGCGCG
CGCCGAGCCGGCCGTGAAAATGGCATCAAAATTTTCAATAAGTCGAAAGGGTTATTGCAGACCACGATGCACATTCCGGC
ACCGGAAGAAGATAAAGACTCGGCAAACTGA

Upstream 100 bases:

>100_bases
GCCAGCGCTTTACATCATCGGGTATTATGTGCGCCGCGCGTGGGCCGGCGGTCGGCGCGTGTTTAAATCAGTCACCTCCC
GAAAGACAGGAAAGTACACC

Downstream 100 bases:

>100_bases
GTTGGTGATAAGCGCGGCAGCCTTGCCGCGCTTTAGTAAGCATTACTTCGCGCGAACGCCTTCCACAGAAATAATCAGCT
CCACGTCCTGCGATGCCGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 356; Mature: 355

Protein sequence:

>356_residues
MPVLHNRISNEELKARMLAETEPRTTVSFYKYFTIEDPKAFRDSLYVQFDKLKVFGRIYVAKEGINAQISVPQNKFEAFK
AALFASHPALDQVRLNIALEDDGKSFWVLRLKVRERIVADGLDDESFNPANVGEYLQADRVNQMIDDPDTLFVDMRNHYE
YEVGHFENAIEVPSDTFRDQLPMAVEMLQDNKDKNIVMYCTGGIRCEKASAYMLHNGFKNVYHVEGGIIEYARKAKEQGL
PLKFVGKNFVFDERMGERISDDVIANCHQCGAPCDTHTNCLNDGCHLLFIQCPSCAAKFEGCCSEICREELKLPREEQRA
RRAGRENGIKIFNKSKGLLQTTMHIPAPEEDKDSAN

Sequences:

>Translated_356_residues
MPVLHNRISNEELKARMLAETEPRTTVSFYKYFTIEDPKAFRDSLYVQFDKLKVFGRIYVAKEGINAQISVPQNKFEAFK
AALFASHPALDQVRLNIALEDDGKSFWVLRLKVRERIVADGLDDESFNPANVGEYLQADRVNQMIDDPDTLFVDMRNHYE
YEVGHFENAIEVPSDTFRDQLPMAVEMLQDNKDKNIVMYCTGGIRCEKASAYMLHNGFKNVYHVEGGIIEYARKAKEQGL
PLKFVGKNFVFDERMGERISDDVIANCHQCGAPCDTHTNCLNDGCHLLFIQCPSCAAKFEGCCSEICREELKLPREEQRA
RRAGRENGIKIFNKSKGLLQTTMHIPAPEEDKDSAN
>Mature_355_residues
PVLHNRISNEELKARMLAETEPRTTVSFYKYFTIEDPKAFRDSLYVQFDKLKVFGRIYVAKEGINAQISVPQNKFEAFKA
ALFASHPALDQVRLNIALEDDGKSFWVLRLKVRERIVADGLDDESFNPANVGEYLQADRVNQMIDDPDTLFVDMRNHYEY
EVGHFENAIEVPSDTFRDQLPMAVEMLQDNKDKNIVMYCTGGIRCEKASAYMLHNGFKNVYHVEGGIIEYARKAKEQGLP
LKFVGKNFVFDERMGERISDDVIANCHQCGAPCDTHTNCLNDGCHLLFIQCPSCAAKFEGCCSEICREELKLPREEQRAR
RAGRENGIKIFNKSKGLLQTTMHIPAPEEDKDSAN

Specific function: Unknown. [C]

COG id: COG1054

COG function: function code R; Predicted sulfurtransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 rhodanese domain

Homologues:

Organism=Homo sapiens, GI111038120, Length=299, Percent_Identity=29.4314381270903, Blast_Score=119, Evalue=4e-27,
Organism=Escherichia coli, GI1787294, Length=350, Percent_Identity=75.4285714285714, Blast_Score=572, Evalue=1e-165,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1886_SERP5 (A8GCZ9)

Other databases:

- EMBL:   CP000826
- RefSeq:   YP_001478117.1
- ProteinModelPortal:   A8GCZ9
- STRING:   A8GCZ9
- GeneID:   5606303
- GenomeReviews:   CP000826_GR
- KEGG:   spe:Spro_1886
- eggNOG:   COG1054
- HOGENOM:   HBG366219
- OMA:   ARNDYEY
- ProtClustDB:   PRK00142
- BioCyc:   SPRO399741:SPRO_1886-MONOMER
- HAMAP:   MF_00469
- InterPro:   IPR001763
- InterPro:   IPR020936
- Gene3D:   G3DSA:3.40.250.10
- SMART:   SM00450

Pfam domain/function: PF00581 Rhodanese; SSF52821 Rhodanese-like

EC number: NA

Molecular weight: Translated: 40624; Mature: 40492

Theoretical pI: Translated: 5.66; Mature: 5.66

Prosite motif: PS50206 RHODANESE_3

Important sites: ACT_SITE 200-200

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVLHNRISNEELKARMLAETEPRTTVSFYKYFTIEDPKAFRDSLYVQFDKLKVFGRIYV
CCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEEEEECCCHHHHHHHEEEEEHEEEEEEEEE
AKEGINAQISVPQNKFEAFKAALFASHPALDQVRLNIALEDDGKSFWVLRLKVRERIVAD
EECCCCEEEECCHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCEEEEEEEEHHHHHHHC
GLDDESFNPANVGEYLQADRVNQMIDDPDTLFVDMRNHYEYEVGHFENAIEVPSDTFRDQ
CCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCEEECCCCCCCCCCCCHHHHHH
LPMAVEMLQDNKDKNIVMYCTGGIRCEKASAYMLHNGFKNVYHVEGGIIEYARKAKEQGL
CHHHHHHHHCCCCCCEEEEECCCEEECCCCHHHHHHCCCCEEEECCCHHHHHHHHHHCCC
PLKFVGKNFVFDERMGERISDDVIANCHQCGAPCDTHTNCLNDGCHLLFIQCPSCAAKFE
CEEECCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCEEEEEECCCHHHHHH
GCCSEICREELKLPREEQRARRAGRENGIKIFNKSKGLLQTTMHIPAPEEDKDSAN
HHHHHHHHHHHCCCHHHHHHHHCCCCCCCEEEECCCCEEEEEEECCCCCCCCCCCC
>Mature Secondary Structure 
PVLHNRISNEELKARMLAETEPRTTVSFYKYFTIEDPKAFRDSLYVQFDKLKVFGRIYV
CCCCCCCCCHHHHHHHHHCCCCCCEEEEEEEEEECCCHHHHHHHEEEEEHEEEEEEEEE
AKEGINAQISVPQNKFEAFKAALFASHPALDQVRLNIALEDDGKSFWVLRLKVRERIVAD
EECCCCEEEECCHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCEEEEEEEEHHHHHHHC
GLDDESFNPANVGEYLQADRVNQMIDDPDTLFVDMRNHYEYEVGHFENAIEVPSDTFRDQ
CCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCEEECCCCCCCCCCCCHHHHHH
LPMAVEMLQDNKDKNIVMYCTGGIRCEKASAYMLHNGFKNVYHVEGGIIEYARKAKEQGL
CHHHHHHHHCCCCCCEEEEECCCEEECCCCHHHHHHCCCCEEEECCCHHHHHHHHHHCCC
PLKFVGKNFVFDERMGERISDDVIANCHQCGAPCDTHTNCLNDGCHLLFIQCPSCAAKFE
CEEECCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCEEEEEECCCHHHHHH
GCCSEICREELKLPREEQRARRAGRENGIKIFNKSKGLLQTTMHIPAPEEDKDSAN
HHHHHHHHHHHCCCHHHHHHHHCCCCCCCEEEECCCCEEEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA