| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is htrB [H]
Identifier: 157370126
GI number: 157370126
Start: 2069981
End: 2070901
Strand: Reverse
Name: htrB [H]
Synonym: Spro_1884
Alternate gene names: 157370126
Gene position: 2070901-2069981 (Counterclockwise)
Preceding gene: 157370127
Following gene: 157370125
Centisome position: 38.01
GC content: 56.03
Gene sequence:
>921_bases ATGACTCAAGTTCCTTCTTTTAATCGCTCTTTACTGCATCCGCGTTATTGGCTCACCTGGCTCGGCATTGGTTTGCTTTA CCTGTTGGTCTTGCTGCCTTATCCGATTATCTATCGCCTCGGCACCTCGCTTGGCCGTTTTTCCATGCGATTTCTCAAGC GCCGCGTGGCAATAGCCCAACGTAATCTGGTGCTGTGCTTCCCGGACATGCCGCAAGCCGAACGCGATGCGTTGGTGGTG CAAAATTTTGAATCCGTCGGTATGGGCCTGTTTGAAACCGGTATGGCGTGGTTTTGGCCAAACTGGCGTATCGAACGCTG GTTCCAGGTTAGCGGGCTGGAACATATTCAGAAGGCACGAGACAACCATCAGGGGGTTTTGCTGATCGGTCTGCACTTCC TGACGCTGGAACTGGGTGCCCGTATCTTTGGCATTCATAATCCAGGCATCGGCGTTTACCGGCCGCATGACAACAAGCTG ATGGACTGGCTGCAGACCTGGGGCCGCATGCGTTCCAACAAATCGATGCTGGACCGTAAGGACGTAAAAGGCATGATCCG CGCGCTAAAGCAGGGGGACATCATCTGGTACGCCCCGGACCATGACTATGGCCCACGCAGCAGCGTGTTCGCCCCACTGT TCGCCGTAGAGAAAGCCGCCACCACCACCGGCAGCTACGTGCTGGTGAGAATGGGCAAGCCGGCCATTATTCCCTTTACC CCGCGCCGCCTGCCGGATGCCAAAGGGTATGAGCTGATTATGCAGCCGGCGGTGGAAAACTTCCCGCTGGATAATGAGCT CGATGCCGCCGCCTTTATGAATAAGGTGGTGGAGAAGGAAATCCTGATGGCGCCGGATCAGTACATGTGGCTGCACCGCC GCTTCAAAACCCGGCCGGAAGGCGAGCCTTCACTTTACTGA
Upstream 100 bases:
>100_bases AACGGCAGAAAATAAACGTTTGGTCAAAAATCCTTCGCAGGAGAGACCATTCGAGAACTCTGTTATTATCATTAAATGAC TGCTTCTAAGCTGAGAACAC
Downstream 100 bases:
>100_bases CTTCTGACCCGCCGTTTGGCGGGTTAGTTTTTTATGCCGCAGAGCTTGAGAAACGACTGCAACGGTGGGATGGTAAAGCC TTCGTAGTTCATCCTGGAGC
Product: lipid A biosynthesis lauroyl acyltransferase
Products: NA
Alternate protein names: Heat shock protein B [H]
Number of amino acids: Translated: 306; Mature: 305
Protein sequence:
>306_residues MTQVPSFNRSLLHPRYWLTWLGIGLLYLLVLLPYPIIYRLGTSLGRFSMRFLKRRVAIAQRNLVLCFPDMPQAERDALVV QNFESVGMGLFETGMAWFWPNWRIERWFQVSGLEHIQKARDNHQGVLLIGLHFLTLELGARIFGIHNPGIGVYRPHDNKL MDWLQTWGRMRSNKSMLDRKDVKGMIRALKQGDIIWYAPDHDYGPRSSVFAPLFAVEKAATTTGSYVLVRMGKPAIIPFT PRRLPDAKGYELIMQPAVENFPLDNELDAAAFMNKVVEKEILMAPDQYMWLHRRFKTRPEGEPSLY
Sequences:
>Translated_306_residues MTQVPSFNRSLLHPRYWLTWLGIGLLYLLVLLPYPIIYRLGTSLGRFSMRFLKRRVAIAQRNLVLCFPDMPQAERDALVV QNFESVGMGLFETGMAWFWPNWRIERWFQVSGLEHIQKARDNHQGVLLIGLHFLTLELGARIFGIHNPGIGVYRPHDNKL MDWLQTWGRMRSNKSMLDRKDVKGMIRALKQGDIIWYAPDHDYGPRSSVFAPLFAVEKAATTTGSYVLVRMGKPAIIPFT PRRLPDAKGYELIMQPAVENFPLDNELDAAAFMNKVVEKEILMAPDQYMWLHRRFKTRPEGEPSLY >Mature_305_residues TQVPSFNRSLLHPRYWLTWLGIGLLYLLVLLPYPIIYRLGTSLGRFSMRFLKRRVAIAQRNLVLCFPDMPQAERDALVVQ NFESVGMGLFETGMAWFWPNWRIERWFQVSGLEHIQKARDNHQGVLLIGLHFLTLELGARIFGIHNPGIGVYRPHDNKLM DWLQTWGRMRSNKSMLDRKDVKGMIRALKQGDIIWYAPDHDYGPRSSVFAPLFAVEKAATTTGSYVLVRMGKPAIIPFTP RRLPDAKGYELIMQPAVENFPLDNELDAAAFMNKVVEKEILMAPDQYMWLHRRFKTRPEGEPSLY
Specific function: Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA. Has 10 fold selectivity for lauroyl- ACP over myristoyl-ACP [H]
COG id: COG1560
COG function: function code M; Lauroyl/myristoyl acyltransferase
Gene ontology:
Cell location: Cell inner membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the htrB/msbB family [H]
Homologues:
Organism=Escherichia coli, GI1787292, Length=306, Percent_Identity=68.3006535947712, Blast_Score=456, Evalue=1e-130, Organism=Escherichia coli, GI87082094, Length=301, Percent_Identity=53.156146179402, Blast_Score=362, Evalue=1e-101, Organism=Escherichia coli, GI1788161, Length=311, Percent_Identity=29.2604501607717, Blast_Score=124, Evalue=1e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004960 - InterPro: IPR011920 [H]
Pfam domain/function: PF03279 Lip_A_acyltrans [H]
EC number: 2.3.1.-
Molecular weight: Translated: 35490; Mature: 35359
Theoretical pI: Translated: 10.13; Mature: 10.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQVPSFNRSLLHPRYWLTWLGIGLLYLLVLLPYPIIYRLGTSLGRFSMRFLKRRVAIAQ CCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RNLVLCFPDMPQAERDALVVQNFESVGMGLFETGMAWFWPNWRIERWFQVSGLEHIQKAR CCEEEEECCCCCCHHHHHHHHCHHHHCCCHHHCCCCEECCCCCEEHHHHHCCHHHHHHHH DNHQGVLLIGLHFLTLELGARIFGIHNPGIGVYRPHDNKLMDWLQTWGRMRSNKSMLDRK CCCCCEEEEHHHHHHHHHCCEEEEEECCCCCEECCCCHHHHHHHHHHHHHHCCHHHHHHH DVKGMIRALKQGDIIWYAPDHDYGPRSSVFAPLFAVEKAATTTGSYVLVRMGKPAIIPFT HHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCEEECCC PRRLPDAKGYELIMQPAVENFPLDNELDAAAFMNKVVEKEILMAPDQYMWLHRRFKTRPE CCCCCCCCCCCEEECCHHHCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCC GEPSLY CCCCCC >Mature Secondary Structure TQVPSFNRSLLHPRYWLTWLGIGLLYLLVLLPYPIIYRLGTSLGRFSMRFLKRRVAIAQ CCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RNLVLCFPDMPQAERDALVVQNFESVGMGLFETGMAWFWPNWRIERWFQVSGLEHIQKAR CCEEEEECCCCCCHHHHHHHHCHHHHCCCHHHCCCCEECCCCCEEHHHHHCCHHHHHHHH DNHQGVLLIGLHFLTLELGARIFGIHNPGIGVYRPHDNKLMDWLQTWGRMRSNKSMLDRK CCCCCEEEEHHHHHHHHHCCEEEEEECCCCCEECCCCHHHHHHHHHHHHHHCCHHHHHHH DVKGMIRALKQGDIIWYAPDHDYGPRSSVFAPLFAVEKAATTTGSYVLVRMGKPAIIPFT HHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCEEECCC PRRLPDAKGYELIMQPAVENFPLDNELDAAAFMNKVVEKEILMAPDQYMWLHRRFKTRPE CCCCCCCCCCCEEECCHHHCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCC GEPSLY CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Acyltransferases [C]
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]