| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is 157370121
Identifier: 157370121
GI number: 157370121
Start: 2065260
End: 2065679
Strand: Direct
Name: 157370121
Synonym: Spro_1879
Alternate gene names: NA
Gene position: 2065260-2065679 (Clockwise)
Preceding gene: 157370120
Following gene: 157370122
Centisome position: 37.9
GC content: 59.29
Gene sequence:
>420_bases ATGTTCAGATACCTGTTTGCTTTGCTGAGTGGCGCCATTTTTGGCCTCGGTCTGATCGTTGCCGGGATGGCCAATCCGGC CAAAGTATTGGCGTTTCTCGATATTACCGGCCACTGGGATCCTTCATTGGCTCTGGTGATGGTGGGCGCCATTGCGGTGG CCGCTCCGGCATTTTACTGGGCGCGCAGGCGACAGCGTAGCTTGTTGGGGGAAGAGATGCAGATCCCAGCCAACCGCCGC CTCGATGGCCGTTTGCTGGCAGGCAGTGCGCTGTTTGGTATCGGTTGGGGCATGGCGGGTATTTGCCCCGGACCGGCCTG GGTACTCGCCGGTGCTGGTTCTTCGGCCGGCTGGCAGTTCGTGGCGGCCATGCTGGTGGGCATGGCGCTGTATGAATTCA TCTTGATACGGAGAAAATAA
Upstream 100 bases:
>100_bases GCGAGACTGGCGCCGCGTTCGCTGGCGGCCACGGCGGTATTTATGCTGTTGGGTTTTGCCACGGTATGGGCAGTCCGTCA CTGGGTGGGAGGCTAATCGC
Downstream 100 bases:
>100_bases TGCCAATAGCCAACGCGGTGCTGCGTATTGCACGTCCGACCGACCGTTTGCAGGAAATTGCTACCATGTATTGTCAGGGA CTGGGGTTCGAACGGCTGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 139; Mature: 139
Protein sequence:
>139_residues MFRYLFALLSGAIFGLGLIVAGMANPAKVLAFLDITGHWDPSLALVMVGAIAVAAPAFYWARRRQRSLLGEEMQIPANRR LDGRLLAGSALFGIGWGMAGICPGPAWVLAGAGSSAGWQFVAAMLVGMALYEFILIRRK
Sequences:
>Translated_139_residues MFRYLFALLSGAIFGLGLIVAGMANPAKVLAFLDITGHWDPSLALVMVGAIAVAAPAFYWARRRQRSLLGEEMQIPANRR LDGRLLAGSALFGIGWGMAGICPGPAWVLAGAGSSAGWQFVAAMLVGMALYEFILIRRK >Mature_139_residues MFRYLFALLSGAIFGLGLIVAGMANPAKVLAFLDITGHWDPSLALVMVGAIAVAAPAFYWARRRQRSLLGEEMQIPANRR LDGRLLAGSALFGIGWGMAGICPGPAWVLAGAGSSAGWQFVAAMLVGMALYEFILIRRK
Specific function: Unknown
COG id: COG2391
COG function: function code R; Predicted transporter component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0394 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007272 [H]
Pfam domain/function: PF04143 DUF395 [H]
EC number: NA
Molecular weight: Translated: 14839; Mature: 14839
Theoretical pI: Translated: 10.92; Mature: 10.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFRYLFALLSGAIFGLGLIVAGMANPAKVLAFLDITGHWDPSLALVMVGAIAVAAPAFYW CHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHH ARRRQRSLLGEEMQIPANRRLDGRLLAGSALFGIGWGMAGICPGPAWVLAGAGSSAGWQF HHHHHHHHCCCHHCCCCCCCCCCEEEECCHHHHHHCCCCCCCCCCCEEEECCCCCCHHHH VAAMLVGMALYEFILIRRK HHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MFRYLFALLSGAIFGLGLIVAGMANPAKVLAFLDITGHWDPSLALVMVGAIAVAAPAFYW CHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHH ARRRQRSLLGEEMQIPANRRLDGRLLAGSALFGIGWGMAGICPGPAWVLAGAGSSAGWQF HHHHHHHHCCCHHCCCCCCCCCCEEEECCHHHHHHCCCCCCCCCCCEEEECCCCCCHHHH VAAMLVGMALYEFILIRRK HHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12533478 [H]