| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is 157370045
Identifier: 157370045
GI number: 157370045
Start: 1985914
End: 1986363
Strand: Direct
Name: 157370045
Synonym: Spro_1803
Alternate gene names: NA
Gene position: 1985914-1986363 (Clockwise)
Preceding gene: 157370044
Following gene: 157370046
Centisome position: 36.45
GC content: 53.33
Gene sequence:
>450_bases ATGCCTCAGGGACATAATCCCCCGTCGTTGTATGAAATGCTGGTCGGCAATTTCGCCGGCGGCCTCGGCCTCCATCAGGT TAGCGAAGAAAATCAGTTCATTCTGTCGGTGCTGGACAATATGCAGCGCATCCTCAACTGTCGCGCCGGGACGCTGGCCC ATTTACCCGATTATGGTCTACCTGATATGGCGAAAATCCTGCAGGGGATGCCGGGTACCTCACATCAACTGATGGGCACG CTGACATCCGTTTTGCTGAAATATGAACCCCGCCTGAAAAACGTTGCCGTGGTGATACTGGAACAGGCTCAGCCCGGTGA ACTGCGTTATGCCATCGATGCAGAGCTGAAGGGTATAGGTCTGGTGCGTTATGGCACCGAATTTATGCCTGAGGGGCGGG TGCTGTTACGCCACTTGAAACAACAGCAGTATCTTGATAATTCGCCGTAA
Upstream 100 bases:
>100_bases GGAGGCGGGTGATTGAGCGTGAAGAGCTGGACCCGGATAAGCCGCGCATCCTGGAGGCCGGGAATAACTATCTGACATTG CTACCCGCTAAGGACGATTA
Downstream 100 bases:
>100_bases ACTCAAGAAAACAGAAGAGGTCAGCGCCTTTTAACTTATAGGGATATTCCAAATGAAACTGCAAACCGGCCTTAAGCTGC CGCTGTTGCTCTGCATGTAT
Product: GPW/gp25 family protein
Products: NA
Alternate protein names: GPW/Gp25 Family Protein; Type VI Secretion System Lysozyme Protein; Type VI Secretion System Protein; Type VI Secretion System Lysozyme-Related Family Protein; Type VI Secretion System Lysozyme-Like Protein
Number of amino acids: Translated: 149; Mature: 148
Protein sequence:
>149_residues MPQGHNPPSLYEMLVGNFAGGLGLHQVSEENQFILSVLDNMQRILNCRAGTLAHLPDYGLPDMAKILQGMPGTSHQLMGT LTSVLLKYEPRLKNVAVVILEQAQPGELRYAIDAELKGIGLVRYGTEFMPEGRVLLRHLKQQQYLDNSP
Sequences:
>Translated_149_residues MPQGHNPPSLYEMLVGNFAGGLGLHQVSEENQFILSVLDNMQRILNCRAGTLAHLPDYGLPDMAKILQGMPGTSHQLMGT LTSVLLKYEPRLKNVAVVILEQAQPGELRYAIDAELKGIGLVRYGTEFMPEGRVLLRHLKQQQYLDNSP >Mature_148_residues PQGHNPPSLYEMLVGNFAGGLGLHQVSEENQFILSVLDNMQRILNCRAGTLAHLPDYGLPDMAKILQGMPGTSHQLMGTL TSVLLKYEPRLKNVAVVILEQAQPGELRYAIDAELKGIGLVRYGTEFMPEGRVLLRHLKQQQYLDNSP
Specific function: Unknown
COG id: COG3518
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16537; Mature: 16405
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQGHNPPSLYEMLVGNFAGGLGLHQVSEENQFILSVLDNMQRILNCRAGTLAHLPDYGL CCCCCCCHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCC PDMAKILQGMPGTSHQLMGTLTSVLLKYEPRLKNVAVVILEQAQPGELRYAIDAELKGIG HHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEEECCCCCCEE LVRYGTEFMPEGRVLLRHLKQQQYLDNSP EEECCCCCCCCHHHHHHHHHHHHHCCCCC >Mature Secondary Structure PQGHNPPSLYEMLVGNFAGGLGLHQVSEENQFILSVLDNMQRILNCRAGTLAHLPDYGL CCCCCCHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCC PDMAKILQGMPGTSHQLMGTLTSVLLKYEPRLKNVAVVILEQAQPGELRYAIDAELKGIG HHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEEECCCCCCEE LVRYGTEFMPEGRVLLRHLKQQQYLDNSP EEECCCCCCCCHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA