| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is yfjI [H]
Identifier: 157370023
GI number: 157370023
Start: 1954913
End: 1956346
Strand: Direct
Name: yfjI [H]
Synonym: Spro_1780
Alternate gene names: 157370023
Gene position: 1954913-1956346 (Clockwise)
Preceding gene: 157370008
Following gene: 157370024
Centisome position: 35.88
GC content: 41.84
Gene sequence:
>1434_bases ATGAATCGCTTCCCAATAAATGCGTTCCCGCCGCTATTGCGTGAAACCATCTTAGATGTAAACGAATGTACCCAGGCACC AATTCCATTAATTGCATCATCGGTGGTGAGTGCTTTGTCATTATCTTGTCAGGGCCTGATAGATATCAAGGTTAATGATA CAGTGGTTTCTCCGGTATCACTGTTTTTATTGGTGATAGCGAACTCTGGTGAGAGAAAAACAACGGTGGACAGAATGGTA CTCAAACCTTTATACGAGCATGACACGCGTTCAATCAATCAATCTGAAGATAAGGGGAAAGACTATGATATTGAGCAGAA AGTCTGGCATGAAAAGCAAAAGGCGATTTTAAACCTAATCAGGAAGAAAACCATAAAAGATCAATGCACCGATGCGTTGT CACAGCGTTTACGGATGTTAGTGGCCGAAAAGCCTGAGCCACCGAAAACTCCTAAACGTATTTATAATAATGTTACACCT GAAGCCTTGCAGATTGCGATGCATAACCACTCACTACATGCTGGGCTGATTGCTGATGAAGGTGCTAATGTTCTGGACAG GAAGGTAATGAATGATTTGAGTTTTATTAACTCAATGTGGGATGGTGTCAGCTTTCATGTTGAACGTAAAACGACACCAA GCTTTACGATAGAAAATGGGCGTATCACGCTGTCAGTTATGGTGCAGAAAAAACCGTTTGATCTGTATTTAAAACGGCAG GGGGAACGAGCGCGTGGAAGTGGTTTTTTTGCGCGCTGCTTACCGGTATTGATTGATGAACGCCTCACCACGCAGGGCGA GCGTTTTATTAAAGAGTATCCCAGCGAAAGAAGGTTTTTAGATGATTTTTATCAGCGTATAAATGAAATATTAGCAGAGG ATGTGGAGCATGACGCATTAATTCAGCGGGTATGTTTATCATTCGAGCCTTCAGCTCAGTATGCATGGGAAGACGTTTAC AATCAAATAGAGAGTCGTATCGGTCCCGATGAAGAGTATGCCAATATGAATGATTTTGCGTCTAAGTTGGCGAATAACGT TGCCCGACTGGCTGCACTACTAAGTTACTTTTCGGAGGGAGATGGGGAAATAAAAAGGCATTATGTGGATAGTGCATGGT TGCTGTGTGAATGGTACATGCAACAGGCTGTAAATATTTTCGGTAATGAAGATGGCTATTATGAAGCGTTGTTATTGTCG TGGTTGGATCGTGAGTATTCACGAACAGGACGAAATCATGTCAGGTATAATGATATACGACGCCTTGGGCCTAACGTTTT ACGAAAAGGAAAGTTGTTGGACAGAGTGATTGATAGTCTTGAAAGGGAAGAGGCAATAGAAATTGATTATTCACGTAATG GTGCAAGAGTTGTGTGTGAATATCGTCGCTTCCATAACAATTCGTTTACAAAAAAGACGGGTTTTGTGTACTAA
Upstream 100 bases:
>100_bases GCTTTCTTATTGGTTTGATTCTTTGCTTTTCATATTGACTTGCGACCTGTATTGCGATTTATTGTCAACTTCTGAAACAA CGTAACCAACAGGTAATATC
Downstream 100 bases:
>100_bases TGCGTTGCTACCGTTGCGATTGTCGCAGAATTGGACCGAGGATTATAGAAAAATAACGCAAAACTAATTTCAGAGTGAAA TTATTTCGTGTATTCAATAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 477; Mature: 477
Protein sequence:
>477_residues MNRFPINAFPPLLRETILDVNECTQAPIPLIASSVVSALSLSCQGLIDIKVNDTVVSPVSLFLLVIANSGERKTTVDRMV LKPLYEHDTRSINQSEDKGKDYDIEQKVWHEKQKAILNLIRKKTIKDQCTDALSQRLRMLVAEKPEPPKTPKRIYNNVTP EALQIAMHNHSLHAGLIADEGANVLDRKVMNDLSFINSMWDGVSFHVERKTTPSFTIENGRITLSVMVQKKPFDLYLKRQ GERARGSGFFARCLPVLIDERLTTQGERFIKEYPSERRFLDDFYQRINEILAEDVEHDALIQRVCLSFEPSAQYAWEDVY NQIESRIGPDEEYANMNDFASKLANNVARLAALLSYFSEGDGEIKRHYVDSAWLLCEWYMQQAVNIFGNEDGYYEALLLS WLDREYSRTGRNHVRYNDIRRLGPNVLRKGKLLDRVIDSLEREEAIEIDYSRNGARVVCEYRRFHNNSFTKKTGFVY
Sequences:
>Translated_477_residues MNRFPINAFPPLLRETILDVNECTQAPIPLIASSVVSALSLSCQGLIDIKVNDTVVSPVSLFLLVIANSGERKTTVDRMV LKPLYEHDTRSINQSEDKGKDYDIEQKVWHEKQKAILNLIRKKTIKDQCTDALSQRLRMLVAEKPEPPKTPKRIYNNVTP EALQIAMHNHSLHAGLIADEGANVLDRKVMNDLSFINSMWDGVSFHVERKTTPSFTIENGRITLSVMVQKKPFDLYLKRQ GERARGSGFFARCLPVLIDERLTTQGERFIKEYPSERRFLDDFYQRINEILAEDVEHDALIQRVCLSFEPSAQYAWEDVY NQIESRIGPDEEYANMNDFASKLANNVARLAALLSYFSEGDGEIKRHYVDSAWLLCEWYMQQAVNIFGNEDGYYEALLLS WLDREYSRTGRNHVRYNDIRRLGPNVLRKGKLLDRVIDSLEREEAIEIDYSRNGARVVCEYRRFHNNSFTKKTGFVY >Mature_477_residues MNRFPINAFPPLLRETILDVNECTQAPIPLIASSVVSALSLSCQGLIDIKVNDTVVSPVSLFLLVIANSGERKTTVDRMV LKPLYEHDTRSINQSEDKGKDYDIEQKVWHEKQKAILNLIRKKTIKDQCTDALSQRLRMLVAEKPEPPKTPKRIYNNVTP EALQIAMHNHSLHAGLIADEGANVLDRKVMNDLSFINSMWDGVSFHVERKTTPSFTIENGRITLSVMVQKKPFDLYLKRQ GERARGSGFFARCLPVLIDERLTTQGERFIKEYPSERRFLDDFYQRINEILAEDVEHDALIQRVCLSFEPSAQYAWEDVY NQIESRIGPDEEYANMNDFASKLANNVARLAALLSYFSEGDGEIKRHYVDSAWLLCEWYMQQAVNIFGNEDGYYEALLLS WLDREYSRTGRNHVRYNDIRRLGPNVLRKGKLLDRVIDSLEREEAIEIDYSRNGARVVCEYRRFHNNSFTKKTGFVY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788978, Length=430, Percent_Identity=34.6511627906977, Blast_Score=273, Evalue=2e-74,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55087; Mature: 55087
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRFPINAFPPLLRETILDVNECTQAPIPLIASSVVSALSLSCQGLIDIKVNDTVVSPVS CCCCCCCCCCHHHHHHHHCHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHH LFLLVIANSGERKTTVDRMVLKPLYEHDTRSINQSEDKGKDYDIEQKVWHEKQKAILNLI HHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH RKKTIKDQCTDALSQRLRMLVAEKPEPPKTPKRIYNNVTPEALQIAMHNHSLHAGLIADE HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCHHHHHHHHHCCCCEECEEECC GANVLDRKVMNDLSFINSMWDGVSFHVERKTTPSFTIENGRITLSVMVQKKPFDLYLKRQ CCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCEEEECCEEEEEEEEECCCCHHHHHCC GERARGSGFFARCLPVLIDERLTTQGERFIKEYPSERRFLDDFYQRINEILAEDVEHDAL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCHHHHH IQRVCLSFEPSAQYAWEDVYNQIESRIGPDEEYANMNDFASKLANNVARLAALLSYFSEG HHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCC DGEIKRHYVDSAWLLCEWYMQQAVNIFGNEDGYYEALLLSWLDREYSRTGRNHVRYNDIR CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHH RLGPNVLRKGKLLDRVIDSLEREEAIEIDYSRNGARVVCEYRRFHNNSFTKKTGFVY HHCHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MNRFPINAFPPLLRETILDVNECTQAPIPLIASSVVSALSLSCQGLIDIKVNDTVVSPVS CCCCCCCCCCHHHHHHHHCHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHH LFLLVIANSGERKTTVDRMVLKPLYEHDTRSINQSEDKGKDYDIEQKVWHEKQKAILNLI HHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH RKKTIKDQCTDALSQRLRMLVAEKPEPPKTPKRIYNNVTPEALQIAMHNHSLHAGLIADE HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCHHHHHHHHHCCCCEECEEECC GANVLDRKVMNDLSFINSMWDGVSFHVERKTTPSFTIENGRITLSVMVQKKPFDLYLKRQ CCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCEEEECCEEEEEEEEECCCCHHHHHCC GERARGSGFFARCLPVLIDERLTTQGERFIKEYPSERRFLDDFYQRINEILAEDVEHDAL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCHHHHH IQRVCLSFEPSAQYAWEDVYNQIESRIGPDEEYANMNDFASKLANNVARLAALLSYFSEG HHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCC DGEIKRHYVDSAWLLCEWYMQQAVNIFGNEDGYYEALLLSWLDREYSRTGRNHVRYNDIR CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHH RLGPNVLRKGKLLDRVIDSLEREEAIEIDYSRNGARVVCEYRRFHNNSFTKKTGFVY HHCHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]