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The map label for this gene is yccS [H]

Identifier: 157370000

GI number: 157370000

Start: 1936043

End: 1938178

Strand: Reverse

Name: yccS [H]

Synonym: Spro_1757

Alternate gene names: 157370000

Gene position: 1938178-1936043 (Counterclockwise)

Preceding gene: 157370001

Following gene: 157369998

Centisome position: 35.57

GC content: 53.56

Gene sequence:

>2136_bases
GTGCTCTCTTTTGCACCAGCAATACGCCGTTATGCCTACAACAGCAATCTGCTTTATGATCTGCGCATCTTCATTGCACT
GGCTGGTGCGGCCGCCGTACCCTGGTGGTTAGCCATTCCCAAGCTCACCATTCCCCTGACTCTGGGGGTGGTGGCAGCGG
CGTTGACCGATCTGGATGATCGCCTGGCTGGCAGGCTACGCAATCTGTTGATCACACTGGTGTGTTTTTTTGTTGCTTCC
GCCTCCATTGAGCTGCTGTTTCCTTATCCGTGGCTGTTCGCTCTTGGCCTCACCGCCTCCACCTGCGGTTTTATTTTGCT
GGGTGCCCTGGGGCAACGTTACGCCACCATTGCATTTGGTGCCTTGCTGATCGCGGTCTATACCATGCTCGGCACCTCAA
TGTATGACGCCTGGTATCAACAGCCGACGCTGCTGATCCTTGGTGCCCTGTGGTACAACCTGCTGACGCTGATTGGCCAC
CTGATCTTTCCTATCCGACCTCTGCAGGAAAATCTGGCGCGTTGTTACAATCAATTGGCAAGTTATCTGGATGCCAAAGC
CAACCTGTTTGACCCCGACGTCGAGCATGATGCAGACCTGCCGTGGATGGACGTTGCCATGGCCAATAGCGCTCTGGTGA
CCATTCTTAACCAGACCAAAGTTTCATTGCTGACGCGGCTAAAAGGCGATCGGGGTCAACGCGGTACCCGCCGCACGCTG
CATTATTATTTCGTCGCCCAGGATATCCATGAGCGCGCCAGTTCCTCCCACGTTCAATATCAGGCACTGAGTCGACAGTT
TCGTCACAGTGATATTCTGTTTCGTTTCCAACGCTTGCTCAGCATGCAGGCTCGCGCCTGTCAGCAGTTGGCGCAGTCGA
TTTTGCTGCGGCAAAAGTATCAGCACAATCTTCGTTTCGAACCGGTCTTTGGCCGTATTGAAGAAGCATTGACTCGCATT
GCCATCACCCCGGAAAACCGTGAGCTGACCAAAGCACTATCGCACCTGTTGAAAAATTTGCGCGCGATTGACGCCCAACT
GGCAAATATTGAGTCCGAGCAGGCACTGGCCAGCGGCCTGGCGGAAGAGAATAGTCTGTCGGATGACCGGCTCACCGGCT
GGAGCGATATCCGCCTGCGTATCAGCCGCCATCTGACACCTCAGTCTGCCTTGTTCCGTCATGCCATCCGTATGTCAGTG
GTACTGTGCGTGGGCTACGCCTTTATTCAGTTTACCGGCATGCAGCACGGTTATTGGATCCTGTTAACCAGCCTGTTTGT
CTGCCAACCCAATTATAATGCCACGCGTCGCAGGCTGGCGCTTCGAATCATCGGCACGCTGGCCGGCATTCTTGTTGGCC
TACCGATCCTCTATTTTGTGCCCTCTCTGGAAGGCCAGATGGTGCTGATCGTCATCAGCGGCGTTCTGTTCTTCGCCTTT
CGAACCGTGCAATACGCACATGCCACCATGTTTATCACCCTGCTGGTATTGCTGTGCTTTAACTTGCTGGGTGAGGGTTT
TGAAGTGGCCGCGCCTAGGGTTTATGACACGATTCTGGGATGTGCCATCGCCTGGGCGGCAGTCAGTTTTATCTGGCCAG
ACTGGAAATTCCGCCAATTACCGGCAGTTGTCAGTAAAACGCTGAATGCCAACTGCCGTTATCTGGATGCCATTCTGGTG
CAATATCATCAGGGTAAAGACAACGGCCTTCCTTATCGTATCGCTCGCCGGGATGCACACAACAGTGATGCGGAGCTGGC
TTCGGTGATATCAAATATGTCTGCCGATCCAAAAGCAAATAAAGAAGTTCAGGAAGCCGCCTTCCGCCTGTTGTGTTTAA
ACCACACCTTATTAAGTTATATCTCTGCGTTGGGTGCACATCGTGAGCGTCTGAATAACCCCGCTACGCTGGACCTGTTA
AATGATGCAGTTTGTTATGTCGATGGTGCCCTGCACCAGGAAGAACTCGACGACCGGCGCATCACTCAGGCGTTGGAAAG
CCTGGCTGAACGAATTGTGCACGCTGCGCCGGAGCCGGAAAGCAAAGATCAATTGGTGTTGCAGCAAATTGGGCTGGTCA
TCGAGTTGCTGCCGGAGCTTACTATGCTGAATGCGCAAATCGGCAAATCGGCTTGA

Upstream 100 bases:

>100_bases
GACGAGTGGTATCCGTTGAAATGGCGCAACAGGCCAGAACTGAAAATGCCCGACGTCAGTATCAGCAGCGTTAATTTTTT
CTCCGCCTGAGGAGTTTTTC

Downstream 100 bases:

>100_bases
TCACCCGGGGCCTTTTATCAGGCCCCGGACTCCCGGATTATGTCCGTGACTAAGTAACGACATGGTACGTTCAAACCAAT
TCGTCAGCTCACTGCGCATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 711; Mature: 711

Protein sequence:

>711_residues
MLSFAPAIRRYAYNSNLLYDLRIFIALAGAAAVPWWLAIPKLTIPLTLGVVAAALTDLDDRLAGRLRNLLITLVCFFVAS
ASIELLFPYPWLFALGLTASTCGFILLGALGQRYATIAFGALLIAVYTMLGTSMYDAWYQQPTLLILGALWYNLLTLIGH
LIFPIRPLQENLARCYNQLASYLDAKANLFDPDVEHDADLPWMDVAMANSALVTILNQTKVSLLTRLKGDRGQRGTRRTL
HYYFVAQDIHERASSSHVQYQALSRQFRHSDILFRFQRLLSMQARACQQLAQSILLRQKYQHNLRFEPVFGRIEEALTRI
AITPENRELTKALSHLLKNLRAIDAQLANIESEQALASGLAEENSLSDDRLTGWSDIRLRISRHLTPQSALFRHAIRMSV
VLCVGYAFIQFTGMQHGYWILLTSLFVCQPNYNATRRRLALRIIGTLAGILVGLPILYFVPSLEGQMVLIVISGVLFFAF
RTVQYAHATMFITLLVLLCFNLLGEGFEVAAPRVYDTILGCAIAWAAVSFIWPDWKFRQLPAVVSKTLNANCRYLDAILV
QYHQGKDNGLPYRIARRDAHNSDAELASVISNMSADPKANKEVQEAAFRLLCLNHTLLSYISALGAHRERLNNPATLDLL
NDAVCYVDGALHQEELDDRRITQALESLAERIVHAAPEPESKDQLVLQQIGLVIELLPELTMLNAQIGKSA

Sequences:

>Translated_711_residues
MLSFAPAIRRYAYNSNLLYDLRIFIALAGAAAVPWWLAIPKLTIPLTLGVVAAALTDLDDRLAGRLRNLLITLVCFFVAS
ASIELLFPYPWLFALGLTASTCGFILLGALGQRYATIAFGALLIAVYTMLGTSMYDAWYQQPTLLILGALWYNLLTLIGH
LIFPIRPLQENLARCYNQLASYLDAKANLFDPDVEHDADLPWMDVAMANSALVTILNQTKVSLLTRLKGDRGQRGTRRTL
HYYFVAQDIHERASSSHVQYQALSRQFRHSDILFRFQRLLSMQARACQQLAQSILLRQKYQHNLRFEPVFGRIEEALTRI
AITPENRELTKALSHLLKNLRAIDAQLANIESEQALASGLAEENSLSDDRLTGWSDIRLRISRHLTPQSALFRHAIRMSV
VLCVGYAFIQFTGMQHGYWILLTSLFVCQPNYNATRRRLALRIIGTLAGILVGLPILYFVPSLEGQMVLIVISGVLFFAF
RTVQYAHATMFITLLVLLCFNLLGEGFEVAAPRVYDTILGCAIAWAAVSFIWPDWKFRQLPAVVSKTLNANCRYLDAILV
QYHQGKDNGLPYRIARRDAHNSDAELASVISNMSADPKANKEVQEAAFRLLCLNHTLLSYISALGAHRERLNNPATLDLL
NDAVCYVDGALHQEELDDRRITQALESLAERIVHAAPEPESKDQLVLQQIGLVIELLPELTMLNAQIGKSA
>Mature_711_residues
MLSFAPAIRRYAYNSNLLYDLRIFIALAGAAAVPWWLAIPKLTIPLTLGVVAAALTDLDDRLAGRLRNLLITLVCFFVAS
ASIELLFPYPWLFALGLTASTCGFILLGALGQRYATIAFGALLIAVYTMLGTSMYDAWYQQPTLLILGALWYNLLTLIGH
LIFPIRPLQENLARCYNQLASYLDAKANLFDPDVEHDADLPWMDVAMANSALVTILNQTKVSLLTRLKGDRGQRGTRRTL
HYYFVAQDIHERASSSHVQYQALSRQFRHSDILFRFQRLLSMQARACQQLAQSILLRQKYQHNLRFEPVFGRIEEALTRI
AITPENRELTKALSHLLKNLRAIDAQLANIESEQALASGLAEENSLSDDRLTGWSDIRLRISRHLTPQSALFRHAIRMSV
VLCVGYAFIQFTGMQHGYWILLTSLFVCQPNYNATRRRLALRIIGTLAGILVGLPILYFVPSLEGQMVLIVISGVLFFAF
RTVQYAHATMFITLLVLLCFNLLGEGFEVAAPRVYDTILGCAIAWAAVSFIWPDWKFRQLPAVVSKTLNANCRYLDAILV
QYHQGKDNGLPYRIARRDAHNSDAELASVISNMSADPKANKEVQEAAFRLLCLNHTLLSYISALGAHRERLNNPATLDLL
NDAVCYVDGALHQEELDDRRITQALESLAERIVHAAPEPESKDQLVLQQIGLVIELLPELTMLNAQIGKSA

Specific function: Unknown

COG id: COG1289

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yccS/yhfK family [H]

Homologues:

Organism=Escherichia coli, GI87081808, Length=707, Percent_Identity=70.1555869872702, Blast_Score=1007, Evalue=0.0,
Organism=Escherichia coli, GI87082248, Length=540, Percent_Identity=25.3703703703704, Blast_Score=108, Evalue=1e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010019
- InterPro:   IPR010020 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 79723; Mature: 79723

Theoretical pI: Translated: 8.21; Mature: 8.21

Prosite motif: PS00217 SUGAR_TRANSPORT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSFAPAIRRYAYNSNLLYDLRIFIALAGAAAVPWWLAIPKLTIPLTLGVVAAALTDLDD
CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
RLAGRLRNLLITLVCFFVASASIELLFPYPWLFALGLTASTCGFILLGALGQRYATIAFG
HHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALLIAVYTMLGTSMYDAWYQQPTLLILGALWYNLLTLIGHLIFPIRPLQENLARCYNQLA
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
SYLDAKANLFDPDVEHDADLPWMDVAMANSALVTILNQTKVSLLTRLKGDRGQRGTRRTL
HHHCCCCCCCCCCCCCCCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
HYYFVAQDIHERASSSHVQYQALSRQFRHSDILFRFQRLLSMQARACQQLAQSILLRQKY
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QHNLRFEPVFGRIEEALTRIAITPENRELTKALSHLLKNLRAIDAQLANIESEQALASGL
HHCCCCCHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCC
AEENSLSDDRLTGWSDIRLRISRHLTPQSALFRHAIRMSVVLCVGYAFIQFTGMQHGYWI
CCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
LLTSLFVCQPNYNATRRRLALRIIGTLAGILVGLPILYFVPSLEGQMVLIVISGVLFFAF
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHH
RTVQYAHATMFITLLVLLCFNLLGEGFEVAAPRVYDTILGCAIAWAAVSFIWPDWKFRQL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHH
PAVVSKTLNANCRYLDAILVQYHQGKDNGLPYRIARRDAHNSDAELASVISNMSADPKAN
HHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHCCCCCCCCC
KEVQEAAFRLLCLNHTLLSYISALGAHRERLNNPATLDLLNDAVCYVDGALHQEELDDRR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHH
ITQALESLAERIVHAAPEPESKDQLVLQQIGLVIELLPELTMLNAQIGKSA
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MLSFAPAIRRYAYNSNLLYDLRIFIALAGAAAVPWWLAIPKLTIPLTLGVVAAALTDLDD
CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
RLAGRLRNLLITLVCFFVASASIELLFPYPWLFALGLTASTCGFILLGALGQRYATIAFG
HHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALLIAVYTMLGTSMYDAWYQQPTLLILGALWYNLLTLIGHLIFPIRPLQENLARCYNQLA
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
SYLDAKANLFDPDVEHDADLPWMDVAMANSALVTILNQTKVSLLTRLKGDRGQRGTRRTL
HHHCCCCCCCCCCCCCCCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
HYYFVAQDIHERASSSHVQYQALSRQFRHSDILFRFQRLLSMQARACQQLAQSILLRQKY
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QHNLRFEPVFGRIEEALTRIAITPENRELTKALSHLLKNLRAIDAQLANIESEQALASGL
HHCCCCCHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCC
AEENSLSDDRLTGWSDIRLRISRHLTPQSALFRHAIRMSVVLCVGYAFIQFTGMQHGYWI
CCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
LLTSLFVCQPNYNATRRRLALRIIGTLAGILVGLPILYFVPSLEGQMVLIVISGVLFFAF
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHH
RTVQYAHATMFITLLVLLCFNLLGEGFEVAAPRVYDTILGCAIAWAAVSFIWPDWKFRQL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHH
PAVVSKTLNANCRYLDAILVQYHQGKDNGLPYRIARRDAHNSDAELASVISNMSADPKAN
HHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHCCCCCCCCC
KEVQEAAFRLLCLNHTLLSYISALGAHRERLNNPATLDLLNDAVCYVDGALHQEELDDRR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHH
ITQALESLAERIVHAAPEPESKDQLVLQQIGLVIELLPELTMLNAQIGKSA
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]