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The map label for this gene is ytfH [C]

Identifier: 157369993

GI number: 157369993

Start: 1929446

End: 1929973

Strand: Reverse

Name: ytfH [C]

Synonym: Spro_1750

Alternate gene names: 157369993

Gene position: 1929973-1929446 (Counterclockwise)

Preceding gene: 157369994

Following gene: 157369992

Centisome position: 35.42

GC content: 54.92

Gene sequence:

>528_bases
ATGCAAAAAACTCGTTTTGATAACATGCCATGCCCGGTAGCTCGCTCACTGGACCGCGTCGGGGAATGGTGGAGCATCCT
GATACTTCGCGATGCGTTCCATGGTTTGTCCCGGTTTGATGAGTTCCAGCAGAGCCTTGGACTTTCGCCCACCATATTGA
CCCGTCGCCTGAAGTATCTGGTAGAAAGCGGCATACTGCATAAACAACGCTATCAAACACGACCGGTACGCTACCAGTAC
TTACTCACTGAGCGCGGCAAAGATTTTTTCCCGGTGCTTGCAGCCCTGTTTCACTGGGGGAATACCCACCTGGCCGATGA
CGGCATCAGTGCCGAACTGGTCGATCGTCGTACCGGGCAACCCATACGCGTGCAACTGATCGACAGCATTACCCAGCAGC
CCATTGCGCTGCATAATATTACTTTAGCCCCAGGGCCGGCAGCGACCGACGGCATGCGCCAGCGCGCGGCCCTGATGCTG
CAGAACCTTTCTGAATTTCCCCCTGAATCATCCAAGGAGTCACTATGA

Upstream 100 bases:

>100_bases
CTTCCGGGTCGCCGTTTATTTCCCTTAGTTATCTTTTAATCGTTGCGTCCATAGCGGCTAAACAGTAACTACAATAATTG
TAGTAACCAGGAGGTATGCC

Downstream 100 bases:

>100_bases
ACACTCGTCGTATAGTCATTACCGGCATGGGCGCCGTTTCGCCACTGGGATGCGGCGTAGAGGCTATCTGGCAGCGTCTG
TTGAACGGCCAGTCCGGCAT

Product: HxlR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 175; Mature: 175

Protein sequence:

>175_residues
MQKTRFDNMPCPVARSLDRVGEWWSILILRDAFHGLSRFDEFQQSLGLSPTILTRRLKYLVESGILHKQRYQTRPVRYQY
LLTERGKDFFPVLAALFHWGNTHLADDGISAELVDRRTGQPIRVQLIDSITQQPIALHNITLAPGPAATDGMRQRAALML
QNLSEFPPESSKESL

Sequences:

>Translated_175_residues
MQKTRFDNMPCPVARSLDRVGEWWSILILRDAFHGLSRFDEFQQSLGLSPTILTRRLKYLVESGILHKQRYQTRPVRYQY
LLTERGKDFFPVLAALFHWGNTHLADDGISAELVDRRTGQPIRVQLIDSITQQPIALHNITLAPGPAATDGMRQRAALML
QNLSEFPPESSKESL
>Mature_175_residues
MQKTRFDNMPCPVARSLDRVGEWWSILILRDAFHGLSRFDEFQQSLGLSPTILTRRLKYLVESGILHKQRYQTRPVRYQY
LLTERGKDFFPVLAALFHWGNTHLADDGISAELVDRRTGQPIRVQLIDSITQQPIALHNITLAPGPAATDGMRQRAALML
QNLSEFPPESSKESL

Specific function: Unknown

COG id: COG1733

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH hxlR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002577
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01638 DUF24 [H]

EC number: NA

Molecular weight: Translated: 20014; Mature: 20014

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: PS51118 HTH_HXLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKTRFDNMPCPVARSLDRVGEWWSILILRDAFHGLSRFDEFQQSLGLSPTILTRRLKYL
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
VESGILHKQRYQTRPVRYQYLLTERGKDFFPVLAALFHWGNTHLADDGISAELVDRRTGQ
HHHCHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCC
PIRVQLIDSITQQPIALHNITLAPGPAATDGMRQRAALMLQNLSEFPPESSKESL
CEEHHHHHHHHHCCEEHEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MQKTRFDNMPCPVARSLDRVGEWWSILILRDAFHGLSRFDEFQQSLGLSPTILTRRLKYL
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
VESGILHKQRYQTRPVRYQYLLTERGKDFFPVLAALFHWGNTHLADDGISAELVDRRTGQ
HHHCHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCC
PIRVQLIDSITQQPIALHNITLAPGPAATDGMRQRAALMLQNLSEFPPESSKESL
CEEHHHHHHHHHCCEEHEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]