| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is ssuD
Identifier: 157369980
GI number: 157369980
Start: 1914118
End: 1915266
Strand: Reverse
Name: ssuD
Synonym: Spro_1737
Alternate gene names: 157369980
Gene position: 1915266-1914118 (Counterclockwise)
Preceding gene: 157369981
Following gene: 157369979
Centisome position: 35.15
GC content: 58.75
Gene sequence:
>1149_bases ATGAGCCTGAACGTATTTTGGTTTTTACCCACCCACGGTGACGGTCACTATCTTGGCAGTACTGAAGGGGCCCGCAGCGT CGATTACGGTTATTTGCAGCAAATTGCCCAGGCTGCCGATCGATTGGGTTTTGGTGGCGTGCTGATCCCTACCGGCCGCT CATGTGAAGACTCCTGGCTGGTGGCCGCTTCGCTGATCCCGGTCACCCAACGACTGAAATTCCTGGTAGCCCTGCGCCCC GGCATTATTTCACCCACTCTGGCGGCTCGCCAGGCAGCGACGCTGGATCGTCTTTCCAACGGCCGGGCACTGTTTAATCT GGTTACCGGCGGCGATCCTGATGAATTGGCGGCGGAAGGCCTGCACCTGAATCACGAAGAACGCTACGAGGCCTCGGCAG AATTCACCCATATCTGGCGCAAGGTGCTGGAAGGAGAAACCGTCGATTTTAACGGTAAACATATTCAGGTAAAGGGCGCA AAACTGCTGTACCCACCGGTGCAACAGCCACGCCCACCGCTCTATTTCGGCGGATCCTCCGCCGCTGCGCAGGATCTGGC AGCCGATCAGGTTGAAATGTATCTCACCTGGGGTGAGCCGCCGGCGCAGGTAAAAGAAAAAATTGCCGAGGTACGCGCCA AGGCCGCAGCCAAAGGTCGCCAGGTGCGTTTCGGTATCCGCCTGCACGTCATCGTGCGCGAAACCACCGAGGAAGCCTGG CGGGCTGCCGACCGGCTGATTGCCAATCTGGATGAAAAGACCATCGCCGATGCCCAGCAGGCCTTCGCCCGGTTTGACTC CGTAGGGCAACAACGAATGGCGGCATTGCACGGCGGCAAGAAAGACAATCTGGAGATCAGCCCCAATCTGTGGGCCGGGG TGGGTTTGGTGCGTGGCGGTGCCGGAACCGCGCTGGTGGGCGATGGCCCGACGGTGGCAGCGCGTATGCAGGAATACGCC GATCTGGGCATCGACACCTTTATTTTGTCCGGTTACCCGCATCTGGAAGAGGCCTATCGCGTTGGCGAACTGCTGTTCCC ACATCTTGATCTGGTGGAAAACCAAGCGCCCGCGCCACGCCGACCAGCCAAAGCACAGGGCGAAGTGGTGGCCAATATTT ATATTCCACAAAAAGCATCGCAAAGCTGA
Upstream 100 bases:
>100_bases ACGGCCGATCTGTTTTATGCCAACCGCCTGGTGCCGGTGAAAGTCGATATTTCGCAACGCATCTGGCACCCAAGCGCACA ATAATTTAGGAGAACTGACG
Downstream 100 bases:
>100_bases GGAGCCGCACTATGGCAAACGGCACACAACGAATCTTGTACCGGTTGGCCCCCTGGGCATTGCCGGTAGCGCTGGTGGCA GTCTGGCAAATATCCGTGGA
Product: alkanesulfonate monooxygenase
Products: NA
Alternate protein names: FMNH2-dependent aliphatic sulfonate monooxygenase
Number of amino acids: Translated: 382; Mature: 381
Protein sequence:
>382_residues MSLNVFWFLPTHGDGHYLGSTEGARSVDYGYLQQIAQAADRLGFGGVLIPTGRSCEDSWLVAASLIPVTQRLKFLVALRP GIISPTLAARQAATLDRLSNGRALFNLVTGGDPDELAAEGLHLNHEERYEASAEFTHIWRKVLEGETVDFNGKHIQVKGA KLLYPPVQQPRPPLYFGGSSAAAQDLAADQVEMYLTWGEPPAQVKEKIAEVRAKAAAKGRQVRFGIRLHVIVRETTEEAW RAADRLIANLDEKTIADAQQAFARFDSVGQQRMAALHGGKKDNLEISPNLWAGVGLVRGGAGTALVGDGPTVAARMQEYA DLGIDTFILSGYPHLEEAYRVGELLFPHLDLVENQAPAPRRPAKAQGEVVANIYIPQKASQS
Sequences:
>Translated_382_residues MSLNVFWFLPTHGDGHYLGSTEGARSVDYGYLQQIAQAADRLGFGGVLIPTGRSCEDSWLVAASLIPVTQRLKFLVALRP GIISPTLAARQAATLDRLSNGRALFNLVTGGDPDELAAEGLHLNHEERYEASAEFTHIWRKVLEGETVDFNGKHIQVKGA KLLYPPVQQPRPPLYFGGSSAAAQDLAADQVEMYLTWGEPPAQVKEKIAEVRAKAAAKGRQVRFGIRLHVIVRETTEEAW RAADRLIANLDEKTIADAQQAFARFDSVGQQRMAALHGGKKDNLEISPNLWAGVGLVRGGAGTALVGDGPTVAARMQEYA DLGIDTFILSGYPHLEEAYRVGELLFPHLDLVENQAPAPRRPAKAQGEVVANIYIPQKASQS >Mature_381_residues SLNVFWFLPTHGDGHYLGSTEGARSVDYGYLQQIAQAADRLGFGGVLIPTGRSCEDSWLVAASLIPVTQRLKFLVALRPG IISPTLAARQAATLDRLSNGRALFNLVTGGDPDELAAEGLHLNHEERYEASAEFTHIWRKVLEGETVDFNGKHIQVKGAK LLYPPVQQPRPPLYFGGSSAAAQDLAADQVEMYLTWGEPPAQVKEKIAEVRAKAAAKGRQVRFGIRLHVIVRETTEEAWR AADRLIANLDEKTIADAQQAFARFDSVGQQRMAALHGGKKDNLEISPNLWAGVGLVRGGAGTALVGDGPTVAARMQEYAD LGIDTFILSGYPHLEEAYRVGELLFPHLDLVENQAPAPRRPAKAQGEVVANIYIPQKASQS
Specific function: Catalyzes the desulfonation of aliphatic sulfonates
COG id: COG2141
COG function: function code C; Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the SsuD family
Homologues:
Organism=Escherichia coli, GI1787166, Length=382, Percent_Identity=78.0104712041885, Blast_Score=620, Evalue=1e-179,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): SSUD_SERP5 (A8GCK1)
Other databases:
- EMBL: CP000826 - RefSeq: YP_001477969.1 - ProteinModelPortal: A8GCK1 - SMR: A8GCK1 - STRING: A8GCK1 - GeneID: 5604712 - GenomeReviews: CP000826_GR - KEGG: spe:Spro_1737 - eggNOG: COG2141 - HOGENOM: HBG639644 - OMA: REVRFGI - ProtClustDB: PRK00719 - BioCyc: SPRO399741:SPRO_1737-MONOMER - HAMAP: MF_01229 - InterPro: IPR019911 - InterPro: IPR011251 - InterPro: IPR016048 - Gene3D: G3DSA:3.20.20.30 - TIGRFAMs: TIGR03565
Pfam domain/function: PF00296 Bac_luciferase; SSF51679 Luciferase_like
EC number: =1.14.14.5
Molecular weight: Translated: 41546; Mature: 41414
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLNVFWFLPTHGDGHYLGSTEGARSVDYGYLQQIAQAADRLGFGGVLIPTGRSCEDSWL CCEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCCCCCCHH VAASLIPVTQRLKFLVALRPGIISPTLAARQAATLDRLSNGRALFNLVTGGDPDELAAEG HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHCC LHLNHEERYEASAEFTHIWRKVLEGETVDFNGKHIQVKGAKLLYPPVQQPRPPLYFGGSS CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCEEECCCCCCCCCCEEECCCC AAAQDLAADQVEMYLTWGEPPAQVKEKIAEVRAKAAAKGRQVRFGIRLHVIVRETTEEAW HHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEEECHHHHHH RAADRLIANLDEKTIADAQQAFARFDSVGQQRMAALHGGKKDNLEISPNLWAGVGLVRGG HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHCCCEEEECC AGTALVGDGPTVAARMQEYADLGIDTFILSGYPHLEEAYRVGELLFPHLDLVENQAPAPR CCCEEECCCCHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHCHHHHHCCCCCCCC RPAKAQGEVVANIYIPQKASQS CCCCCCCCEEEEEEECCCCCCC >Mature Secondary Structure SLNVFWFLPTHGDGHYLGSTEGARSVDYGYLQQIAQAADRLGFGGVLIPTGRSCEDSWL CEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCCCCCCHH VAASLIPVTQRLKFLVALRPGIISPTLAARQAATLDRLSNGRALFNLVTGGDPDELAAEG HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHCC LHLNHEERYEASAEFTHIWRKVLEGETVDFNGKHIQVKGAKLLYPPVQQPRPPLYFGGSS CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCEEECCCCCCCCCCEEECCCC AAAQDLAADQVEMYLTWGEPPAQVKEKIAEVRAKAAAKGRQVRFGIRLHVIVRETTEEAW HHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEEECHHHHHH RAADRLIANLDEKTIADAQQAFARFDSVGQQRMAALHGGKKDNLEISPNLWAGVGLVRGG HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHCCCEEEECC AGTALVGDGPTVAARMQEYADLGIDTFILSGYPHLEEAYRVGELLFPHLDLVENQAPAPR CCCEEECCCCHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHCHHHHHCCCCCCCC RPAKAQGEVVANIYIPQKASQS CCCCCCCCEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA