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The map label for this gene is ycaR [C]

Identifier: 157369961

GI number: 157369961

Start: 1888065

End: 1888247

Strand: Direct

Name: ycaR [C]

Synonym: Spro_1718

Alternate gene names: 157369961

Gene position: 1888065-1888247 (Clockwise)

Preceding gene: 157369960

Following gene: 157369962

Centisome position: 34.65

GC content: 50.27

Gene sequence:

>183_bases
ATGGATCACCGTTTACTCGAAATCGTTGCCTGCCCGGTCTGCACCGGTAAGCTTTATTTCAATAAAGAAAACCAGGAATT
GGTCTGCAAAGTGGATGGCCTGGCCTATCCGTTGCGTGACGGCATTCCCGTGCTGTTGGAAAATGAAGCGCGAGCGCTGT
CATTGGATGAGAAACACGCATGA

Upstream 100 bases:

>100_bases
TAAAAATGCCGCGACAAAACAGCCGGTGATTAACCTGGCGCATAGCGTTATGCTATCCTCACGCACTTTCCTGACGTTAA
ATCTCCACCCTGGAGGAAGC

Downstream 100 bases:

>100_bases
GTTTTATCGCAATTATTCCAGCCCGTTATGCATCAACCCGTTTACCGGGTAAACCGCTGGCCGATATCCACGGCAAGCCG
ATGGTGGTGCATGTTATGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 60; Mature: 60

Protein sequence:

>60_residues
MDHRLLEIVACPVCTGKLYFNKENQELVCKVDGLAYPLRDGIPVLLENEARALSLDEKHA

Sequences:

>Translated_60_residues
MDHRLLEIVACPVCTGKLYFNKENQELVCKVDGLAYPLRDGIPVLLENEARALSLDEKHA
>Mature_60_residues
MDHRLLEIVACPVCTGKLYFNKENQELVCKVDGLAYPLRDGIPVLLENEARALSLDEKHA

Specific function: Unknown

COG id: COG2835

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0434 family

Homologues:

Organism=Escherichia coli, GI1787146, Length=60, Percent_Identity=71.6666666666667, Blast_Score=99, Evalue=5e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1718_SERP5 (A8GCI2)

Other databases:

- EMBL:   CP000826
- RefSeq:   YP_001477950.1
- ProteinModelPortal:   A8GCI2
- SMR:   A8GCI2
- STRING:   A8GCI2
- GeneID:   5604468
- GenomeReviews:   CP000826_GR
- KEGG:   spe:Spro_1718
- eggNOG:   COG2835
- HOGENOM:   HBG713593
- OMA:   NELVSEK
- ProtClustDB:   CLSK888830
- BioCyc:   SPRO399741:SPRO_1718-MONOMER
- HAMAP:   MF_01187
- InterPro:   IPR005651

Pfam domain/function: PF03966 Trm112p

EC number: NA

Molecular weight: Translated: 6753; Mature: 6753

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
5.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDHRLLEIVACPVCTGKLYFNKENQELVCKVDGLAYPLRDGIPVLLENEARALSLDEKHA
CCCCEEEEEECCCCCCEEEECCCCCEEEEEECCCEECCCCCCEEEEECCCEEECCCCCCC
>Mature Secondary Structure
MDHRLLEIVACPVCTGKLYFNKENQELVCKVDGLAYPLRDGIPVLLENEARALSLDEKHA
CCCCEEEEEECCCCCCEEEECCCCCEEEEEECCCEECCCCCCEEEEECCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA