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The map label for this gene is clpS

Identifier: 157369916

GI number: 157369916

Start: 1830298

End: 1830618

Strand: Direct

Name: clpS

Synonym: Spro_1673

Alternate gene names: 157369916

Gene position: 1830298-1830618 (Clockwise)

Preceding gene: 157369914

Following gene: 157369917

Centisome position: 33.59

GC content: 45.17

Gene sequence:

>321_bases
ATGGGCAATAACAACGATTGGCTAAATTTTGAACACTTGGCCGAAGAAAAACAAATCGATGCGGTAAAACCGCCGTCTAT
GTATAAAGTTATACTTAACAACGACGATTACACACCGATGGAATTTGTGATTGACGTTCTGCAAAAGTTCTTTTCTTATG
ATATTGAACGCGCAACGCAACTGATGCTCACGGTCCACTATCAAGGCAAGGCGATCTGCGGTGTATTTACCGCCGAGGTG
GCGGAAACCAAAGTCGTGCATGTGAACCGTTATGCCAGGGAGAACGAGCATCCGTTGCTTTGTACGCTGGAAAAAGCCTG
A

Upstream 100 bases:

>100_bases
CGGGATGCTGGCGAAGATGATAAAATAGTATGGATACCCCACTTTGAATAACCGGAACCTGTCCCCATATAAAAGGACAG
AGCAGAGAAGATGAGCAGCG

Downstream 100 bases:

>100_bases
ATAAGGCAATCTATTGGGGAGGTGCTTATGCTCAATCAAGAACTGGAACTCAGTCTCAACATGGCTTTCGCCAGAGCGCG
TGAGCACAGACACGAGTTTA

Product: ATP-dependent Clp protease adaptor protein ClpS

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 106; Mature: 105

Protein sequence:

>106_residues
MGNNNDWLNFEHLAEEKQIDAVKPPSMYKVILNNDDYTPMEFVIDVLQKFFSYDIERATQLMLTVHYQGKAICGVFTAEV
AETKVVHVNRYARENEHPLLCTLEKA

Sequences:

>Translated_106_residues
MGNNNDWLNFEHLAEEKQIDAVKPPSMYKVILNNDDYTPMEFVIDVLQKFFSYDIERATQLMLTVHYQGKAICGVFTAEV
AETKVVHVNRYARENEHPLLCTLEKA
>Mature_105_residues
GNNNDWLNFEHLAEEKQIDAVKPPSMYKVILNNDDYTPMEFVIDVLQKFFSYDIERATQLMLTVHYQGKAICGVFTAEVA
ETKVVHVNRYARENEHPLLCTLEKA

Specific function: Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation

COG id: COG2127

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ClpS family

Homologues:

Organism=Escherichia coli, GI1787108, Length=106, Percent_Identity=86.7924528301887, Blast_Score=196, Evalue=2e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CLPS_SERP5 (A8GCD7)

Other databases:

- EMBL:   CP000826
- RefSeq:   YP_001477905.1
- ProteinModelPortal:   A8GCD7
- SMR:   A8GCD7
- STRING:   A8GCD7
- GeneID:   5604175
- GenomeReviews:   CP000826_GR
- KEGG:   spe:Spro_1673
- eggNOG:   COG2127
- HOGENOM:   HBG644923
- OMA:   LMNDDYT
- ProtClustDB:   PRK00033
- BioCyc:   SPRO399741:SPRO_1673-MONOMER
- HAMAP:   MF_00302
- InterPro:   IPR022935
- InterPro:   IPR003769
- InterPro:   IPR014719
- Gene3D:   G3DSA:3.30.1390.10

Pfam domain/function: PF02617 ClpS; SSF54736 Ribosomal_L7/12_C/ClpS-like

EC number: NA

Molecular weight: Translated: 12293; Mature: 12162

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGNNNDWLNFEHLAEEKQIDAVKPPSMYKVILNNDDYTPMEFVIDVLQKFFSYDIERATQ
CCCCCCCCCHHHHHCHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCHHHHEE
LMLTVHYQGKAICGVFTAEVAETKVVHVNRYARENEHPLLCTLEKA
EEEEEEECCCEEEEEEHHHHHCEEEEEEEHHCCCCCCCEEEEEECC
>Mature Secondary Structure 
GNNNDWLNFEHLAEEKQIDAVKPPSMYKVILNNDDYTPMEFVIDVLQKFFSYDIERATQ
CCCCCCCCHHHHHCHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCHHHHEE
LMLTVHYQGKAICGVFTAEVAETKVVHVNRYARENEHPLLCTLEKA
EEEEEEECCCEEEEEEHHHHHCEEEEEEEHHCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA