Click here to switch to the map view.

The map label for this gene is ybjE [H]

Identifier: 157369910

GI number: 157369910

Start: 1822668

End: 1823564

Strand: Reverse

Name: ybjE [H]

Synonym: Spro_1667

Alternate gene names: 157369910

Gene position: 1823564-1822668 (Counterclockwise)

Preceding gene: 157369912

Following gene: 157369909

Centisome position: 33.47

GC content: 57.86

Gene sequence:

>897_bases
ATGTATTCAGGACTGCTGATTATTCTGTTACCGCTGATTGCCGGTTACCTTATTGCGCTACGTAGCCGGACTTTACTGCA
AACCATCAACCGCCTGCTGAGCTGGATGGTCTACGTGATCCTGTTTTTCATGGGTATCAGCCTGGCGTTTCTGGAGGATC
TGAGCAGCAACCTGGTGTTGATATTCCAGTATGCTTCGGTGTTCTTCCTGTGCATTCTCGCCGCCAGTTTGCTGATGCTG
GCACTGCTGGAACGCAAAATGCCGTGGCACAACAGCCATAAACAGGAAAAACTGCCCTCACGCCTGCATATGGCGCTCGA
ATCGCTCAAGCTTTGCGGCGTGGTGCTCGGCGGTTTCCTGCTGGGCCTGACGCAGTGGCAATGGCTGCAGTTTGCCAACA
AAGGCAGCGAATACGCCCTGATCTTCCTGCTGCTGCTGGTGGGCATCCAGCTGCGCAACAGCGGCATGACGCTACGCCAA
ATAGTGCTTAACCGACGTGGCATGATAGTCGCCGTGGTGGTGGTGATAAGTTCACTGGCCGGCGGTGCGCTGGCGGCGCA
ACTGCTGGGGCTGCCGATTAAGGCCGGGCTGGCCATGGCGTCCGGTTTTGGCTGGTATTCGCTTTCCGGCATTTTAATCA
CCGACGCCTATGGCCCGGTGTTAGGCAGCGCGGCCTTCTTTAACGATCTGGCGCGTGAACTGGTAGCCATAGTGCTGATC
CCGACCCTGGTACGTCGTAGCCGCTCGTCAGCGCTGGGTCTGTGCGGCGCCACCTCCATGGACTTTACCCTGCCGGTGCT
GCAACGCAGCGGGGGGATGGAGATAGTGCCACCGGCCATCGTGCATGGCTTTCTGCTCAGCCTGCTGGCACCGGTACTGA
TCGCCCTGTTCTCTTGA

Upstream 100 bases:

>100_bases
TCAAATCTGCCGCTTTACTCCGGACGTGGTTTTGGTTAGCGTGTGGAGCCTCGCCGCTCATCCAGGCGCCGCCCTCAGAA
CAAAGGACGCAAGCTTCACC

Downstream 100 bases:

>100_bases
CCCTTCTCCGGGGGTTCGCCCCCGGAAAGCGTAATAATTCCCATCCGCACGGTAAAATTGCGCTAAATCAAACTTGCCCT
TGGTAGCATCACAAAAGCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 298; Mature: 298

Protein sequence:

>298_residues
MYSGLLIILLPLIAGYLIALRSRTLLQTINRLLSWMVYVILFFMGISLAFLEDLSSNLVLIFQYASVFFLCILAASLLML
ALLERKMPWHNSHKQEKLPSRLHMALESLKLCGVVLGGFLLGLTQWQWLQFANKGSEYALIFLLLLVGIQLRNSGMTLRQ
IVLNRRGMIVAVVVVISSLAGGALAAQLLGLPIKAGLAMASGFGWYSLSGILITDAYGPVLGSAAFFNDLARELVAIVLI
PTLVRRSRSSALGLCGATSMDFTLPVLQRSGGMEIVPPAIVHGFLLSLLAPVLIALFS

Sequences:

>Translated_298_residues
MYSGLLIILLPLIAGYLIALRSRTLLQTINRLLSWMVYVILFFMGISLAFLEDLSSNLVLIFQYASVFFLCILAASLLML
ALLERKMPWHNSHKQEKLPSRLHMALESLKLCGVVLGGFLLGLTQWQWLQFANKGSEYALIFLLLLVGIQLRNSGMTLRQ
IVLNRRGMIVAVVVVISSLAGGALAAQLLGLPIKAGLAMASGFGWYSLSGILITDAYGPVLGSAAFFNDLARELVAIVLI
PTLVRRSRSSALGLCGATSMDFTLPVLQRSGGMEIVPPAIVHGFLLSLLAPVLIALFS
>Mature_298_residues
MYSGLLIILLPLIAGYLIALRSRTLLQTINRLLSWMVYVILFFMGISLAFLEDLSSNLVLIFQYASVFFLCILAASLLML
ALLERKMPWHNSHKQEKLPSRLHMALESLKLCGVVLGGFLLGLTQWQWLQFANKGSEYALIFLLLLVGIQLRNSGMTLRQ
IVLNRRGMIVAVVVVISSLAGGALAAQLLGLPIKAGLAMASGFGWYSLSGILITDAYGPVLGSAAFFNDLARELVAIVLI
PTLVRRSRSSALGLCGATSMDFTLPVLQRSGGMEIVPPAIVHGFLLSLLAPVLIALFS

Specific function: Unknown

COG id: COG2431

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1452 [H]

Homologues:

Organism=Escherichia coli, GI87081795, Length=298, Percent_Identity=70.4697986577181, Blast_Score=403, Evalue=1e-114,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005642
- ProDom:   PD022789 [H]

Pfam domain/function: PF03956 DUF340 [H]

EC number: NA

Molecular weight: Translated: 32388; Mature: 32388

Theoretical pI: Translated: 10.19; Mature: 10.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYSGLLIILLPLIAGYLIALRSRTLLQTINRLLSWMVYVILFFMGISLAFLEDLSSNLVL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
IFQYASVFFLCILAASLLMLALLERKMPWHNSHKQEKLPSRLHMALESLKLCGVVLGGFL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGLTQWQWLQFANKGSEYALIFLLLLVGIQLRNSGMTLRQIVLNRRGMIVAVVVVISSLA
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHC
GGALAAQLLGLPIKAGLAMASGFGWYSLSGILITDAYGPVLGSAAFFNDLARELVAIVLI
CHHHHHHHHCCCHHHHHHHHCCCCHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHH
PTLVRRSRSSALGLCGATSMDFTLPVLQRSGGMEIVPPAIVHGFLLSLLAPVLIALFS
HHHHHHHCCCHHCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MYSGLLIILLPLIAGYLIALRSRTLLQTINRLLSWMVYVILFFMGISLAFLEDLSSNLVL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
IFQYASVFFLCILAASLLMLALLERKMPWHNSHKQEKLPSRLHMALESLKLCGVVLGGFL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGLTQWQWLQFANKGSEYALIFLLLLVGIQLRNSGMTLRQIVLNRRGMIVAVVVVISSLA
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHC
GGALAAQLLGLPIKAGLAMASGFGWYSLSGILITDAYGPVLGSAAFFNDLARELVAIVLI
CHHHHHHHHCCCHHHHHHHHCCCCHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHH
PTLVRRSRSSALGLCGATSMDFTLPVLQRSGGMEIVPPAIVHGFLLSLLAPVLIALFS
HHHHHHHCCCHHCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]