| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
Click here to switch to the map view.
The map label for this gene is artJ [H]
Identifier: 157369895
GI number: 157369895
Start: 1807485
End: 1808219
Strand: Reverse
Name: artJ [H]
Synonym: Spro_1652
Alternate gene names: 157369895
Gene position: 1808219-1807485 (Counterclockwise)
Preceding gene: 157369896
Following gene: 157369894
Centisome position: 33.19
GC content: 53.2
Gene sequence:
>735_bases ATGAAAAAACTATTGCTGGCCGCCACGGTATTAGCAGGCATCGCCTTTAACGCCAGCGCAGCCGAGACCATTCGTTTCGC CGCTTCCGCCACCTACCCGCCGTTTGAGTCGCTGGATGCCAACAACAAGATCGTGGGTTTTGATATCGATCTGGCTAACG CGCTGTGCAAACAAATGAAGGCCGAATGTACCTTCACCAACCAGGCGTTCGACAGCCTGATCGCCGCGCTTAAATTCAAG AAATACGACGCGGTGATCTCCGGTATGGACATCACGCCAGAGCGCAGCAAGCAAGTTGCCTTCACTCAGCCCTATTATGC CAACTCGGCAATTGTGATTGCCGAAAAAGGCAAATTCAGTTCGCTGGCGGATCTGAAAGGGAAAAAGGTCGGCATGGAGA ACGGTACCACCCACCAGAAATACATGCAGGACAAACACCCGGAGATTAACACCGTCTCTTACGACAGCTATCAGAACGCC ATTCTCGAGTTGAAAAATGGCCGTATTGACGGCGTATTCGGTGATACCGCCGTGGTGAATGAGTGGCTGAAGAACAATCC TCAGTTGGCTCCGGTCGGTGAACACGTTACCGATGCACAATACTTCGGTACCGGTCTGGGTATTGCGGTACGGCCGGACA ATCAGGCGCTGCTGGCCAAGCTCAACAGTGCGCTGGACGCCATTAAGGCCGACGGCACCTACAAAGCCATTAACGACAAG TGGTTCCCGCAGTAA
Upstream 100 bases:
>100_bases TAACACCGACCGACAGCCGCCAAAACCTCTGGGTTATTGTCAGTAAAATCAAGCGGTGACGAGATAAAAACACGCAGTCT TGCAGACAGGAGCTTTAAGC
Downstream 100 bases:
>100_bases GCGCTATTCGGGGCGTGGAATGCCACGCCTTGTTTACCAAACCTAAGCATTGTCCACAGTTCCTTTCGGTGCTAAATTTG ATACTAAATATAACACCAAA
Product: cationic amino acid ABC transporter periplasmic binding protein
Products: ADP; phosphate; L-arginine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 244; Mature: 244
Protein sequence:
>244_residues MKKLLLAATVLAGIAFNASAAETIRFAASATYPPFESLDANNKIVGFDIDLANALCKQMKAECTFTNQAFDSLIAALKFK KYDAVISGMDITPERSKQVAFTQPYYANSAIVIAEKGKFSSLADLKGKKVGMENGTTHQKYMQDKHPEINTVSYDSYQNA ILELKNGRIDGVFGDTAVVNEWLKNNPQLAPVGEHVTDAQYFGTGLGIAVRPDNQALLAKLNSALDAIKADGTYKAINDK WFPQ
Sequences:
>Translated_244_residues MKKLLLAATVLAGIAFNASAAETIRFAASATYPPFESLDANNKIVGFDIDLANALCKQMKAECTFTNQAFDSLIAALKFK KYDAVISGMDITPERSKQVAFTQPYYANSAIVIAEKGKFSSLADLKGKKVGMENGTTHQKYMQDKHPEINTVSYDSYQNA ILELKNGRIDGVFGDTAVVNEWLKNNPQLAPVGEHVTDAQYFGTGLGIAVRPDNQALLAKLNSALDAIKADGTYKAINDK WFPQ >Mature_244_residues MKKLLLAATVLAGIAFNASAAETIRFAASATYPPFESLDANNKIVGFDIDLANALCKQMKAECTFTNQAFDSLIAALKFK KYDAVISGMDITPERSKQVAFTQPYYANSAIVIAEKGKFSSLADLKGKKVGMENGTTHQKYMQDKHPEINTVSYDSYQNA ILELKNGRIDGVFGDTAVVNEWLKNNPQLAPVGEHVTDAQYFGTGLGIAVRPDNQALLAKLNSALDAIKADGTYKAINDK WFPQ
Specific function: Part of the ABC transporter complex ArtPIQMJ involved in arginine transport. Binds L-arginine with high affinity [H]
COG id: COG0834
COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1787085, Length=244, Percent_Identity=77.4590163934426, Blast_Score=399, Evalue=1e-113, Organism=Escherichia coli, GI1787088, Length=242, Percent_Identity=67.7685950413223, Blast_Score=356, Evalue=1e-100, Organism=Escherichia coli, GI1788649, Length=253, Percent_Identity=37.9446640316205, Blast_Score=170, Evalue=7e-44, Organism=Escherichia coli, GI1788648, Length=228, Percent_Identity=37.719298245614, Blast_Score=152, Evalue=1e-38, Organism=Escherichia coli, GI1788228, Length=252, Percent_Identity=29.3650793650794, Blast_Score=124, Evalue=6e-30, Organism=Escherichia coli, GI1787031, Length=244, Percent_Identity=31.9672131147541, Blast_Score=110, Evalue=1e-25,
Paralogues:
None
Copy number: 1180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015683 - InterPro: IPR005768 - InterPro: IPR001638 - InterPro: IPR018313 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: NA
Molecular weight: Translated: 26567; Mature: 26567
Theoretical pI: Translated: 7.49; Mature: 7.49
Prosite motif: PS01039 SBP_BACTERIAL_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLLLAATVLAGIAFNASAAETIRFAASATYPPFESLDANNKIVGFDIDLANALCKQMK CCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHCCCCCCEEEEEHHHHHHHHHHHH AECTFTNQAFDSLIAALKFKKYDAVISGMDITPERSKQVAFTQPYYANSAIVIAEKGKFS HCCEECHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCEEEECCCCCCCEEEEEECCCCC SLADLKGKKVGMENGTTHQKYMQDKHPEINTVSYDSYQNAILELKNGRIDGVFGDTAVVN HHHHCCCCEECCCCCCCHHHHHHHCCCCCCEEECCHHHHHHEEECCCEECEEECCHHHHH EWLKNNPQLAPVGEHVTDAQYFGTGLGIAVRPDNQALLAKLNSALDAIKADGTYKAINDK HHHHCCCCCCCCCCCCCCHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCEEECCCC WFPQ CCCC >Mature Secondary Structure MKKLLLAATVLAGIAFNASAAETIRFAASATYPPFESLDANNKIVGFDIDLANALCKQMK CCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHCCCCCCEEEEEHHHHHHHHHHHH AECTFTNQAFDSLIAALKFKKYDAVISGMDITPERSKQVAFTQPYYANSAIVIAEKGKFS HCCEECHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCEEEECCCCCCCEEEEEECCCCC SLADLKGKKVGMENGTTHQKYMQDKHPEINTVSYDSYQNAILELKNGRIDGVFGDTAVVN HHHHCCCCEECCCCCCCHHHHHHHCCCCCCEEECCHHHHHHEEECCCEECEEECCHHHHH EWLKNNPQLAPVGEHVTDAQYFGTGLGIAVRPDNQALLAKLNSALDAIKADGTYKAINDK HHHHCCCCCCCCCCCCCCHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCEEECCCC WFPQ CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-arginine [Periplasm]; H2O [C]
Specific reaction: ATP + L-arginine [Periplasm] + H2O = ADP + phosphate + L-arginine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8501075; 8905232; 9278503; 9298646; 9600841 [H]