| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is ybjM [H]
Identifier: 157369883
GI number: 157369883
Start: 1797785
End: 1798165
Strand: Direct
Name: ybjM [H]
Synonym: Spro_1640
Alternate gene names: 157369883
Gene position: 1797785-1798165 (Clockwise)
Preceding gene: 157369881
Following gene: 157369885
Centisome position: 32.99
GC content: 57.74
Gene sequence:
>381_bases ATGGCGAGTGAACGGTATTGGTGGGGAATATTAAGCTGTTTTCTGCTGTTCAGCCTGGTGTATCTCGGCCAGCAGAGTGG GGCATTTGGCAGCACGGATCATGAACACCGGGGGGAGACCGGCCTGTTGCTGTTTGTGATACCCGGCGTGGTCGCGAGCT ACTTATCGAGCAAAAAACGCATTCTCTGCCCGCTACTGGGGGCGTTGTATGCGTTGCCGCTGTGTCTGATCATCCGCCAT TTCTGGCTAACGCCGTCTGCCTCGGTGTGGCAGGAATTGGCTTATGCCACCAGCGCGGTGTTCTGGTGCATGTTCGGGGC GTTGCTGGCTTTGTTTGCGCGCGGCCTGTTGCAGGCCTACCGGCAGTGTCATCGTGGCTAA
Upstream 100 bases:
>100_bases AAAGTTCAGTTTAGCGTTGTCGGTTTACGACAAGGCGTCACCGGCATTGTGGCACGGCTGATTTCTACGGTGTGGTAATG AGGTTAAAGGGGGAGGGGGC
Downstream 100 bases:
>100_bases CGGCAATAAAAAAAGGCGCTATGAGCGCCTTTTTCTCGTTGTGCCTGAAGCTTACTGGAACAGATTCAGGTTTTCTTTGG CATAAGCTTCGAAATCGGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 126; Mature: 125
Protein sequence:
>126_residues MASERYWWGILSCFLLFSLVYLGQQSGAFGSTDHEHRGETGLLLFVIPGVVASYLSSKKRILCPLLGALYALPLCLIIRH FWLTPSASVWQELAYATSAVFWCMFGALLALFARGLLQAYRQCHRG
Sequences:
>Translated_126_residues MASERYWWGILSCFLLFSLVYLGQQSGAFGSTDHEHRGETGLLLFVIPGVVASYLSSKKRILCPLLGALYALPLCLIIRH FWLTPSASVWQELAYATSAVFWCMFGALLALFARGLLQAYRQCHRG >Mature_125_residues ASERYWWGILSCFLLFSLVYLGQQSGAFGSTDHEHRGETGLLLFVIPGVVASYLSSKKRILCPLLGALYALPLCLIIRHF WLTPSASVWQELAYATSAVFWCMFGALLALFARGLLQAYRQCHRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787072, Length=121, Percent_Identity=42.1487603305785, Blast_Score=93, Evalue=4e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020368 - ProDom: PD079046 [H]
Pfam domain/function: PF11045 YbjM [H]
EC number: NA
Molecular weight: Translated: 14120; Mature: 13989
Theoretical pI: Translated: 8.74; Mature: 8.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 4.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASERYWWGILSCFLLFSLVYLGQQSGAFGSTDHEHRGETGLLLFVIPGVVASYLSSKKR CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHH ILCPLLGALYALPLCLIIRHFWLTPSASVWQELAYATSAVFWCMFGALLALFARGLLQAY HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RQCHRG HHHHCC >Mature Secondary Structure ASERYWWGILSCFLLFSLVYLGQQSGAFGSTDHEHRGETGLLLFVIPGVVASYLSSKKR CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHH ILCPLLGALYALPLCLIIRHFWLTPSASVWQELAYATSAVFWCMFGALLALFARGLLQAY HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RQCHRG HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]