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The map label for this gene is deoC [H]

Identifier: 157369875

GI number: 157369875

Start: 1789598

End: 1790278

Strand: Reverse

Name: deoC [H]

Synonym: Spro_1632

Alternate gene names: 157369875

Gene position: 1790278-1789598 (Counterclockwise)

Preceding gene: 157369877

Following gene: 157369874

Centisome position: 32.86

GC content: 56.39

Gene sequence:

>681_bases
ATGACTACCGAAAACATTGATTACGCCCGCTATGTCGATCACACCCTGCTGGCGATGGATGCCACTGAAGAGCAAATCGC
CAAACTGTGTGAAGAAGCGCAACAGCACAACTTCTACGCCGTCTGCGTTAACTCTGGTTACGTGCCATTGGCTGCGCACC
TGCTGCAAGAAAGCGAAGTGAAAATCTGCTCGGTGATTGGTTTCCCGCTGGGTGCCGGCCTGACGGTAACCAAAGCTTTC
GAAGCTAAAGCGGCAATTGCTGCCGGCGCGCAGGAAATTGACATGGTGATCAACGTGGGTTGGCTGAAAAGCGGCCTGCT
GGATGAAGTTAAAGCCGACATCGCCGCAGTGCGCGAGGTTTGCGCGGCGATCCCGTTGAAGGTAATATTGGAAACCTGCC
TGCTCAGCGATGCGCAGATCGTTCAGGTTTGTGAAATGTGTCGCGAACTCGATGTGGCCTTCGTTAAAACCTCTACCGGC
TTCAGCACCGGCGGTGCTCGTGAAGAGCACGTCAAACTGATGCGCGCGACGGTGGGCAGTGAGATGGGCGTTAAAGCATC
CGGCGCCGTGCGCGATCGCGCAACCGCCGAGAAGATGATCAAAGCAGGTGCAACGCGTATCGGCACCAGCTCTGGCGTAG
CAATCGTTTCCGGTGATCAGGCCGCTGCCGGCAGCTACTGA

Upstream 100 bases:

>100_bases
GCATTCATTTTTAAACACCACTATGTTTGTCGCCAGTTAAATGTTATTATTCTAACATTACTCACATCCTGCTTTGATAA
AACCTTAATAAGGAATCGAG

Downstream 100 bases:

>100_bases
TAACCTGAGGCGTCTGGGTACCGGGCGCACGCCGTGATAATCTGATGCGGGGTAATAAGTTCAGCCAATGGCTGGGCCGC
TATTACCCCGCATTTGTGTG

Product: deoxyribose-phosphate aldolase

Products: NA

Alternate protein names: Phosphodeoxyriboaldolase; DERA; Deoxyriboaldolase [H]

Number of amino acids: Translated: 226; Mature: 225

Protein sequence:

>226_residues
MTTENIDYARYVDHTLLAMDATEEQIAKLCEEAQQHNFYAVCVNSGYVPLAAHLLQESEVKICSVIGFPLGAGLTVTKAF
EAKAAIAAGAQEIDMVINVGWLKSGLLDEVKADIAAVREVCAAIPLKVILETCLLSDAQIVQVCEMCRELDVAFVKTSTG
FSTGGAREEHVKLMRATVGSEMGVKASGAVRDRATAEKMIKAGATRIGTSSGVAIVSGDQAAAGSY

Sequences:

>Translated_226_residues
MTTENIDYARYVDHTLLAMDATEEQIAKLCEEAQQHNFYAVCVNSGYVPLAAHLLQESEVKICSVIGFPLGAGLTVTKAF
EAKAAIAAGAQEIDMVINVGWLKSGLLDEVKADIAAVREVCAAIPLKVILETCLLSDAQIVQVCEMCRELDVAFVKTSTG
FSTGGAREEHVKLMRATVGSEMGVKASGAVRDRATAEKMIKAGATRIGTSSGVAIVSGDQAAAGSY
>Mature_225_residues
TTENIDYARYVDHTLLAMDATEEQIAKLCEEAQQHNFYAVCVNSGYVPLAAHLLQESEVKICSVIGFPLGAGLTVTKAFE
AKAAIAAGAQEIDMVINVGWLKSGLLDEVKADIAAVREVCAAIPLKVILETCLLSDAQIVQVCEMCRELDVAFVKTSTGF
STGGAREEHVKLMRATVGSEMGVKASGAVRDRATAEKMIKAGATRIGTSSGVAIVSGDQAAAGSY

Specific function: Nucleotide and deoxyribonucleotide catabolism. [C]

COG id: COG0274

COG function: function code F; Deoxyribose-phosphate aldolase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the deoC/fbaB aldolase family. DeoC type 1 subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790841, Length=206, Percent_Identity=32.0388349514563, Blast_Score=76, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR011343
- InterPro:   IPR002915
- InterPro:   IPR022979 [H]

Pfam domain/function: PF01791 DeoC [H]

EC number: =4.1.2.4 [H]

Molecular weight: Translated: 23831; Mature: 23699

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTENIDYARYVDHTLLAMDATEEQIAKLCEEAQQHNFYAVCVNSGYVPLAAHLLQESEV
CCCCCCCHHHHHHHHHHEECCCHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHCCH
KICSVIGFPLGAGLTVTKAFEAKAAIAAGAQEIDMVINVGWLKSGLLDEVKADIAAVREV
HHHHHCCCCCCCCCEEHHHHHHHHHHHCCHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHH
CAAIPLKVILETCLLSDAQIVQVCEMCRELDVAFVKTSTGFSTGGAREEHVKLMRATVGS
HHHCCHHHHHHHHHCCCHHHHHHHHHHHHCCEEEEEECCCCCCCCCHHHHHHHHHHHHCC
EMGVKASGAVRDRATAEKMIKAGATRIGTSSGVAIVSGDQAAAGSY
CCCCCCCCCHHHHHHHHHHHHHCCHHCCCCCCEEEEECCCCCCCCC
>Mature Secondary Structure 
TTENIDYARYVDHTLLAMDATEEQIAKLCEEAQQHNFYAVCVNSGYVPLAAHLLQESEV
CCCCCCHHHHHHHHHHEECCCHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHCCH
KICSVIGFPLGAGLTVTKAFEAKAAIAAGAQEIDMVINVGWLKSGLLDEVKADIAAVREV
HHHHHCCCCCCCCCEEHHHHHHHHHHHCCHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHH
CAAIPLKVILETCLLSDAQIVQVCEMCRELDVAFVKTSTGFSTGGAREEHVKLMRATVGS
HHHCCHHHHHHHHHCCCHHHHHHHHHHHHCCEEEEEECCCCCCCCCHHHHHHHHHHHHCC
EMGVKASGAVRDRATAEKMIKAGATRIGTSSGVAIVSGDQAAAGSY
CCCCCCCCCHHHHHHHHHHHHHCCHHCCCCCCEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA