| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is gutR [H]
Identifier: 157369783
GI number: 157369783
Start: 1676244
End: 1678580
Strand: Direct
Name: gutR [H]
Synonym: Spro_1540
Alternate gene names: 157369783
Gene position: 1676244-1678580 (Clockwise)
Preceding gene: 157369781
Following gene: 157369785
Centisome position: 30.76
GC content: 34.23
Gene sequence:
>2337_bases ATGGCTTTTAATTTAACAAGAATGACAGTCTATGCCTTAATTAGTGCACTAGAAGAAGATCTTAGGGCTCTTATTAAAGA TAACTTAAGGGGGGTCGAAAATCCATTTGGCCTCATCAACCTTGAGTTAGAATTGAGGGCAAGAAATAGAGTTGAAAGAG ATATTGGCGAATATTTAAATGAAATTGATTTTTGTGATCTGGTCGACTATTTTGATTTGGGAGATACATATCAGACGATT AACACAAACTCAACGTATTTTCCATTGCACATTGCAAGCATAATAAAGAAGAATACTAAGAAGTTCGACGTGATTGTGCC AATAAGAAATAGAGTTATGCACATTCGGCCTTTAGATGTTGACGACTTTCCAACGGTATCCTCGTTTGCTTTAAAGCTAG TTGAAGAGAATGAAACTGTTTGGTCAAATACGAAGGAGACTTTCGAAAAGTTAGATAGGAACCCAAGTTTTGTATTATCC TTAGATATAAAATGTCTTGAGGAAGATAATTTCAATCATAATTTACCACTCCCTGACTTTGATGAAACTGGGTTAATTGG AAGAAATGAAGATGTAAAGAAAGTAAAACAGCTTTGTTTGGGAGCCTTTCCTGTTATCTCAATTGTTGGTGAGGGTGGGG TAGGGAAAACTGCATTAGCTTTGAAGGTAGCTTATGAACTATTAGAGGATCCTACCTCTCCTTTTGATGCAATAGTTTGG GTATCGTCAAAGACTACACAGATTACTGTTAATGAAATAAAAGACATTAAAGGGGCTATAAATGACTCACTAGGTGTTAT TCAGGAGATATCAAATCAAGTAGTAGGTCAGAGCTCGGAACCTATACGGCTAGAGGAAATAATTGAATATTTAGCAACAT TCAAAATTGCTTTGTTTATAGATAATTTAGAAACAATTTTAGACGAAAATATTAAGAACTTTGTTGGTTCGCTTCCTCAG GGTAGCAAAATAATTATCACGTCGAGAATTGGCTTAGGTGCTTATGAATATCCAGTTAAACTACAGGGTATTGATGAGTC ATATGCATCACAATTATTAAGAATTCTTGCTAAGTTAAGAAGTGTAGACTGCCTCTCTAAACTAGATGAAAAAGTTCTAA GAGGGTACGTTAATAGAATGCATAGAAATCCTAGTTATATAAAATGGTTTGTAAGCTCAGTTCAAACGGGACTCTCACCA GAAAGCGTTTTACAAAATTCTATTGTTTTTCTTGAGTTCTGTATGTCTAATGTCTATGAATTCTTATCTAAGGAAGCTCA GCACTTAACTGCTGCTATGCAATGCGCTCCAGGGCTTAAAGATATTCCAGAGCTAGCATATTTAACTGATTTTGACTCTC TACATGCTCAGAGAGCAATACAACAGTTGATGTCTACAAACATGCTCTCACAATCTTCAAAAATAAACGGTGCCAGTGTT AAAACCACCTATGAGCTTTCAGAATTAGCAAGATCGTATTTGGGTAAACATCATAAACCTTCGCAATCATTCCAAAAAAA TATCAGAGAAAAAAGGAATAAGCTAAATTCTATATTTGAGCAACAGATGTCTGCTAGAACTAGAAATAAATATTCAGTAA ATAACATTAAATTCAGAGATAAATCTGACCGTGTAATTGCTAAAATGCTTTATGATGCACAAACAAACATCAGGCATAGC TCGCATGATAAGGCTTATGAAATTTTAGTTGAAGCTCATAGGTTAGCACCTGATTATTTCGAAGTGGCCCGCATTATGGC ATATTTTTATCAAAAGAGTGGGAATTTGAGCGATGCCAGATCACAATATGAATTAGCTATTGTACTATCCCCGAATACTC CTCAGTTACATTATTGGTTTGGACGCTTCCTATTGCACGAAGAAGAGAATATTGATGATGCAATCGTACAATTTGAAATT GCGCATAAACTTGACGAAGAGTCTGTAGAAGTGTCTCTTGACCTTGCAAGAGCATATCTCTTTCAATATGAATTTGACTC ATGTAGTAAAATTCTTAATAAGTTAGAACCAATAATTGAAACAGCTGATGAGCATCAATATAAAATATATTTAGATACTG ATATTCAGATCTTTTATCGAATGGCAGATAATTTTTCTCAAACTGGAAGTTTTGATAAATCTCTCGAATCTCTTGAAAAG ATGAAATTCGCATTTAGTAGTTTGCCTGAAAAATTCAAAGATAGGTATATCAGAAAAAAATTATCGAAGTGTGAGTTTAC TTTAAACAAAATTGCTAAAAATTGCTCAGATCCTGCCATTAAATTACAAGTTGATATATTTAGAGAATGGGTTTCACAAG AAGCAGTTTTTTCCTAA
Upstream 100 bases:
>100_bases GAATGTCGTTATCAACCTGCCTATAAATGTCATTTTTTGGTATACTTAGATCTTGTTTTTTTGTAAAGTGTAAGTTTAGG ATAAGGGAAGGTGTAATGAT
Downstream 100 bases:
>100_bases TTGTAAAATCATGGCCGATATTTTTCTCGGCCATAATTATCATTCTGTATTTTTTAAAACTTGTTTTTCTATTTATAAAT TAATTTACTGACGTTCTTAC
Product: AAA ATPase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 778; Mature: 777
Protein sequence:
>778_residues MAFNLTRMTVYALISALEEDLRALIKDNLRGVENPFGLINLELELRARNRVERDIGEYLNEIDFCDLVDYFDLGDTYQTI NTNSTYFPLHIASIIKKNTKKFDVIVPIRNRVMHIRPLDVDDFPTVSSFALKLVEENETVWSNTKETFEKLDRNPSFVLS LDIKCLEEDNFNHNLPLPDFDETGLIGRNEDVKKVKQLCLGAFPVISIVGEGGVGKTALALKVAYELLEDPTSPFDAIVW VSSKTTQITVNEIKDIKGAINDSLGVIQEISNQVVGQSSEPIRLEEIIEYLATFKIALFIDNLETILDENIKNFVGSLPQ GSKIIITSRIGLGAYEYPVKLQGIDESYASQLLRILAKLRSVDCLSKLDEKVLRGYVNRMHRNPSYIKWFVSSVQTGLSP ESVLQNSIVFLEFCMSNVYEFLSKEAQHLTAAMQCAPGLKDIPELAYLTDFDSLHAQRAIQQLMSTNMLSQSSKINGASV KTTYELSELARSYLGKHHKPSQSFQKNIREKRNKLNSIFEQQMSARTRNKYSVNNIKFRDKSDRVIAKMLYDAQTNIRHS SHDKAYEILVEAHRLAPDYFEVARIMAYFYQKSGNLSDARSQYELAIVLSPNTPQLHYWFGRFLLHEEENIDDAIVQFEI AHKLDEESVEVSLDLARAYLFQYEFDSCSKILNKLEPIIETADEHQYKIYLDTDIQIFYRMADNFSQTGSFDKSLESLEK MKFAFSSLPEKFKDRYIRKKLSKCEFTLNKIAKNCSDPAIKLQVDIFREWVSQEAVFS
Sequences:
>Translated_778_residues MAFNLTRMTVYALISALEEDLRALIKDNLRGVENPFGLINLELELRARNRVERDIGEYLNEIDFCDLVDYFDLGDTYQTI NTNSTYFPLHIASIIKKNTKKFDVIVPIRNRVMHIRPLDVDDFPTVSSFALKLVEENETVWSNTKETFEKLDRNPSFVLS LDIKCLEEDNFNHNLPLPDFDETGLIGRNEDVKKVKQLCLGAFPVISIVGEGGVGKTALALKVAYELLEDPTSPFDAIVW VSSKTTQITVNEIKDIKGAINDSLGVIQEISNQVVGQSSEPIRLEEIIEYLATFKIALFIDNLETILDENIKNFVGSLPQ GSKIIITSRIGLGAYEYPVKLQGIDESYASQLLRILAKLRSVDCLSKLDEKVLRGYVNRMHRNPSYIKWFVSSVQTGLSP ESVLQNSIVFLEFCMSNVYEFLSKEAQHLTAAMQCAPGLKDIPELAYLTDFDSLHAQRAIQQLMSTNMLSQSSKINGASV KTTYELSELARSYLGKHHKPSQSFQKNIREKRNKLNSIFEQQMSARTRNKYSVNNIKFRDKSDRVIAKMLYDAQTNIRHS SHDKAYEILVEAHRLAPDYFEVARIMAYFYQKSGNLSDARSQYELAIVLSPNTPQLHYWFGRFLLHEEENIDDAIVQFEI AHKLDEESVEVSLDLARAYLFQYEFDSCSKILNKLEPIIETADEHQYKIYLDTDIQIFYRMADNFSQTGSFDKSLESLEK MKFAFSSLPEKFKDRYIRKKLSKCEFTLNKIAKNCSDPAIKLQVDIFREWVSQEAVFS >Mature_777_residues AFNLTRMTVYALISALEEDLRALIKDNLRGVENPFGLINLELELRARNRVERDIGEYLNEIDFCDLVDYFDLGDTYQTIN TNSTYFPLHIASIIKKNTKKFDVIVPIRNRVMHIRPLDVDDFPTVSSFALKLVEENETVWSNTKETFEKLDRNPSFVLSL DIKCLEEDNFNHNLPLPDFDETGLIGRNEDVKKVKQLCLGAFPVISIVGEGGVGKTALALKVAYELLEDPTSPFDAIVWV SSKTTQITVNEIKDIKGAINDSLGVIQEISNQVVGQSSEPIRLEEIIEYLATFKIALFIDNLETILDENIKNFVGSLPQG SKIIITSRIGLGAYEYPVKLQGIDESYASQLLRILAKLRSVDCLSKLDEKVLRGYVNRMHRNPSYIKWFVSSVQTGLSPE SVLQNSIVFLEFCMSNVYEFLSKEAQHLTAAMQCAPGLKDIPELAYLTDFDSLHAQRAIQQLMSTNMLSQSSKINGASVK TTYELSELARSYLGKHHKPSQSFQKNIREKRNKLNSIFEQQMSARTRNKYSVNNIKFRDKSDRVIAKMLYDAQTNIRHSS HDKAYEILVEAHRLAPDYFEVARIMAYFYQKSGNLSDARSQYELAIVLSPNTPQLHYWFGRFLLHEEENIDDAIVQFEIA HKLDEESVEVSLDLARAYLFQYEFDSCSKILNKLEPIIETADEHQYKIYLDTDIQIFYRMADNFSQTGSFDKSLESLEKM KFAFSSLPEKFKDRYIRKKLSKCEFTLNKIAKNCSDPAIKLQVDIFREWVSQEAVFS
Specific function: Activator of the glucitol dehydrogenase gene (gutB) [H]
COG id: COG0457
COG function: function code R; FOG: TPR repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 3 TPR repeats [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR002182 - InterPro: IPR001440 - InterPro: IPR013026 - InterPro: IPR011990 - InterPro: IPR019734 [H]
Pfam domain/function: PF00931 NB-ARC; PF00515 TPR_1 [H]
EC number: NA
Molecular weight: Translated: 89195; Mature: 89064
Theoretical pI: Translated: 5.43; Mature: 5.43
Prosite motif: PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFNLTRMTVYALISALEEDLRALIKDNLRGVENPFGLINLELELRARNRVERDIGEYLN CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEHHHHHHHHHHHHHHH EIDFCDLVDYFDLGDTYQTINTNSTYFPLHIASIIKKNTKKFDVIVPIRNRVMHIRPLDV HCCHHHHHHHHCCCCCEEEECCCCCEEHHHHHHHHHCCCCCEEEEEECCCCEEEEECCCC DDFPTVSSFALKLVEENETVWSNTKETFEKLDRNPSFVLSLDIKCLEEDNFNHNLPLPDF CCCCCHHHHHHHHHHCCCHHHCCCHHHHHHHCCCCCEEEEEEEEEECCCCCCCCCCCCCC DETGLIGRNEDVKKVKQLCLGAFPVISIVGEGGVGKTALALKVAYELLEDPTSPFDAIVW CCCCCCCCCHHHHHHHHHHHCCCHHHHEECCCCCCHHHHHHHHHHHHHHCCCCCCCEEEE VSSKTTQITVNEIKDIKGAINDSLGVIQEISNQVVGQSSEPIRLEEIIEYLATFKIALFI EECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHH DNLETILDENIKNFVGSLPQGSKIIITSRIGLGAYEYPVKLQGIDESYASQLLRILAKLR HHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCEECCEEEECCCHHHHHHHHHHHHHHH SVDCLSKLDEKVLRGYVNRMHRNPSYIKWFVSSVQTGLSPESVLQNSIVFLEFCMSNVYE HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH FLSKEAQHLTAAMQCAPGLKDIPELAYLTDFDSLHAQRAIQQLMSTNMLSQSSKINGASV HHHHHHHHHHHHHHHCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCE KTTYELSELARSYLGKHHKPSQSFQKNIREKRNKLNSIFEQQMSARTRNKYSVNNIKFRD EHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECC KSDRVIAKMLYDAQTNIRHSSHDKAYEILVEAHRLAPDYFEVARIMAYFYQKSGNLSDAR CCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCC SQYELAIVLSPNTPQLHYWFGRFLLHEEENIDDAIVQFEIAHKLDEESVEVSLDLARAYL CCEEEEEEECCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHH FQYEFDSCSKILNKLEPIIETADEHQYKIYLDTDIQIFYRMADNFSQTGSFDKSLESLEK HHHCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHCHHHCCCHHHHHHHHHH MKFAFSSLPEKFKDRYIRKKLSKCEFTLNKIAKNCSDPAIKLQVDIFREWVSQEAVFS HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHCCC >Mature Secondary Structure AFNLTRMTVYALISALEEDLRALIKDNLRGVENPFGLINLELELRARNRVERDIGEYLN CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEHHHHHHHHHHHHHHH EIDFCDLVDYFDLGDTYQTINTNSTYFPLHIASIIKKNTKKFDVIVPIRNRVMHIRPLDV HCCHHHHHHHHCCCCCEEEECCCCCEEHHHHHHHHHCCCCCEEEEEECCCCEEEEECCCC DDFPTVSSFALKLVEENETVWSNTKETFEKLDRNPSFVLSLDIKCLEEDNFNHNLPLPDF CCCCCHHHHHHHHHHCCCHHHCCCHHHHHHHCCCCCEEEEEEEEEECCCCCCCCCCCCCC DETGLIGRNEDVKKVKQLCLGAFPVISIVGEGGVGKTALALKVAYELLEDPTSPFDAIVW CCCCCCCCCHHHHHHHHHHHCCCHHHHEECCCCCCHHHHHHHHHHHHHHCCCCCCCEEEE VSSKTTQITVNEIKDIKGAINDSLGVIQEISNQVVGQSSEPIRLEEIIEYLATFKIALFI EECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHH DNLETILDENIKNFVGSLPQGSKIIITSRIGLGAYEYPVKLQGIDESYASQLLRILAKLR HHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCEECCEEEECCCHHHHHHHHHHHHHHH SVDCLSKLDEKVLRGYVNRMHRNPSYIKWFVSSVQTGLSPESVLQNSIVFLEFCMSNVYE HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH FLSKEAQHLTAAMQCAPGLKDIPELAYLTDFDSLHAQRAIQQLMSTNMLSQSSKINGASV HHHHHHHHHHHHHHHCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCE KTTYELSELARSYLGKHHKPSQSFQKNIREKRNKLNSIFEQQMSARTRNKYSVNNIKFRD EHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECC KSDRVIAKMLYDAQTNIRHSSHDKAYEILVEAHRLAPDYFEVARIMAYFYQKSGNLSDAR CCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCC SQYELAIVLSPNTPQLHYWFGRFLLHEEENIDDAIVQFEIAHKLDEESVEVSLDLARAYL CCEEEEEEECCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHH FQYEFDSCSKILNKLEPIIETADEHQYKIYLDTDIQIFYRMADNFSQTGSFDKSLESLEK HHHCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHCHHHCCCHHHHHHHHHH MKFAFSSLPEKFKDRYIRKKLSKCEFTLNKIAKNCSDPAIKLQVDIFREWVSQEAVFS HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8195087; 9455482; 9384377 [H]