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The map label for this gene is betI

Identifier: 157369756

GI number: 157369756

Start: 1648953

End: 1649549

Strand: Direct

Name: betI

Synonym: Spro_1513

Alternate gene names: 157369756

Gene position: 1648953-1649549 (Clockwise)

Preceding gene: 157369754

Following gene: 157369757

Centisome position: 30.26

GC content: 60.3

Gene sequence:

>597_bases
ATGCCAAAGGTAGGGATGCAGCCGATCAGAAGGCAGCAGTTGATAGATGCCACGCTGGCCGCAGTTAATGAAGTTGGAAT
GCATGATGCCACCATTGCGCAGATAGCGCGGCGGGCGGGGGTTTCCAACGGCATCATCAGCCACTATTTCAAGGACAAGA
ACGGCCTGCTGGAGGCCACGATGCGCTATTTGATTAGCCATCTGGGCGAAGCGGTGAAGCTAAGGCTGCAGGCGCTGAGC
GACCACAGCCCGGCATCGCGGCTACAGGCGATCGTCGCCGGCAACTTCGACGACAGCCAGATCAACAGCGCGGCGATGAA
AACCTGGTTGGCCTTTTGGGCCAGCAGTCTGCATCAGCCGCAGCTCAATCGGCTGCAGCAGGTGAATGGTCGCCGTCTGT
ATTCCAACCTGTGCGCCGAATTTAGCCGGGTGTTGCCGCAGGCGGAGGCACGGCTGGCAGCCAAAGGGCTGGCGGCGTTG
ATCGACGGCCTGTGGTTGCGCAGCGCGTTGCGCGGTGCGGCATTTAATCAGGCGCAGGCGATAGCGCTCACTACCGATTA
CATTACGTTTCAACTCCGGGGGCACACGCCACCCTGA

Upstream 100 bases:

>100_bases
AAGTTTAATAGTTAGCATGAAGACCAAGTTCAGCAGGCGGAAAGGCAGTGAAATCCCGCCGCTGAGACGAGGCCGAAGTC
GGTTTTGTGAGAGTCGAATT

Downstream 100 bases:

>100_bases
GGACAACCCAAGGAGAACCTATGTCCCGTTTTGGCTTACAGAAGCTCTATATTAATGGCGCCTATGTAGACAGTACCGAT
GGAAAAACCTTCAACGCAGT

Product: transcriptional regulator BetI

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 198; Mature: 197

Protein sequence:

>198_residues
MPKVGMQPIRRQQLIDATLAAVNEVGMHDATIAQIARRAGVSNGIISHYFKDKNGLLEATMRYLISHLGEAVKLRLQALS
DHSPASRLQAIVAGNFDDSQINSAAMKTWLAFWASSLHQPQLNRLQQVNGRRLYSNLCAEFSRVLPQAEARLAAKGLAAL
IDGLWLRSALRGAAFNQAQAIALTTDYITFQLRGHTPP

Sequences:

>Translated_198_residues
MPKVGMQPIRRQQLIDATLAAVNEVGMHDATIAQIARRAGVSNGIISHYFKDKNGLLEATMRYLISHLGEAVKLRLQALS
DHSPASRLQAIVAGNFDDSQINSAAMKTWLAFWASSLHQPQLNRLQQVNGRRLYSNLCAEFSRVLPQAEARLAAKGLAAL
IDGLWLRSALRGAAFNQAQAIALTTDYITFQLRGHTPP
>Mature_197_residues
PKVGMQPIRRQQLIDATLAAVNEVGMHDATIAQIARRAGVSNGIISHYFKDKNGLLEATMRYLISHLGEAVKLRLQALSD
HSPASRLQAIVAGNFDDSQINSAAMKTWLAFWASSLHQPQLNRLQQVNGRRLYSNLCAEFSRVLPQAEARLAAKGLAALI
DGLWLRSALRGAAFNQAQAIALTTDYITFQLRGHTPP

Specific function: Repressor involved in choline regulation of the bet genes

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain

Homologues:

Organism=Escherichia coli, GI1786505, Length=192, Percent_Identity=68.2291666666667, Blast_Score=260, Evalue=5e-71,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): BETI_SERP5 (A8GBX7)

Other databases:

- EMBL:   CP000826
- RefSeq:   YP_001477745.1
- ProteinModelPortal:   A8GBX7
- STRING:   A8GBX7
- GeneID:   5603623
- GenomeReviews:   CP000826_GR
- KEGG:   spe:Spro_1513
- eggNOG:   COG1309
- HOGENOM:   HBG684746
- OMA:   INHYFGG
- ProtClustDB:   PRK00767
- BioCyc:   SPRO399741:SPRO_1513-MONOMER
- HAMAP:   MF_00768
- InterPro:   IPR009057
- InterPro:   IPR015893
- InterPro:   IPR011075
- InterPro:   IPR017757
- InterPro:   IPR001647
- Gene3D:   G3DSA:1.10.357.10
- PRINTS:   PR00455
- TIGRFAMs:   TIGR03384

Pfam domain/function: PF00440 TetR_N; SSF46689 Homeodomain_like; SSF48498 TetR_like_C

EC number: NA

Molecular weight: Translated: 21739; Mature: 21608

Theoretical pI: Translated: 10.69; Mature: 10.69

Prosite motif: PS01081 HTH_TETR_1; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKVGMQPIRRQQLIDATLAAVNEVGMHDATIAQIARRAGVSNGIISHYFKDKNGLLEAT
CCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHH
MRYLISHLGEAVKLRLQALSDHSPASRLQAIVAGNFDDSQINSAAMKTWLAFWASSLHQP
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCH
QLNRLQQVNGRRLYSNLCAEFSRVLPQAEARLAAKGLAALIDGLWLRSALRGAAFNQAQA
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE
IALTTDYITFQLRGHTPP
EEEEEEEEEEEECCCCCC
>Mature Secondary Structure 
PKVGMQPIRRQQLIDATLAAVNEVGMHDATIAQIARRAGVSNGIISHYFKDKNGLLEAT
CCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHH
MRYLISHLGEAVKLRLQALSDHSPASRLQAIVAGNFDDSQINSAAMKTWLAFWASSLHQP
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCH
QLNRLQQVNGRRLYSNLCAEFSRVLPQAEARLAAKGLAALIDGLWLRSALRGAAFNQAQA
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE
IALTTDYITFQLRGHTPP
EEEEEEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA