Definition Serratia proteamaculans 568 chromosome, complete genome.
Accession NC_009832
Length 5,448,853

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The map label for this gene is yedY [H]

Identifier: 157369753

GI number: 157369753

Start: 1645272

End: 1646060

Strand: Direct

Name: yedY [H]

Synonym: Spro_1510

Alternate gene names: 157369753

Gene position: 1645272-1646060 (Clockwise)

Preceding gene: 157369752

Following gene: 157369754

Centisome position: 30.19

GC content: 56.65

Gene sequence:

>789_bases
ATGAAAGCACAGAAACAGCCAATAAGCCTGAGTGAAGGGCAAGAGATCGTCAGAGAGGCGCAGCAACTGCTGGCACGCCA
GCTGGAGTCTTCTTCGCGGCGGCGCTTCCTGCGCAACGGGCTGACGCTGGGGGGAATTGCCATGCTCACCGGGTGTGACA
TCAGCGACAACACCAATGTCGAACAGGCGCTGAGCCGCATCTCACGCTTTAACGATCGGGTACAGGGCTGGCTGTTCAAT
GCCGACCATCTGGCGCCGGTATATGCCGAGTCGATGATCACTCGTCCGTTCCCGTTCAACGCGTTTTATGCCGAGGATCA
GGCACCGGAGATCAATGGCGACGACTACCGGCTGGAGGTCAACGGACTGGTGCTGAATAAGCAGCCCTGGACGCTGCCGC
AATTGCACAAGATGACGCAAATCAGTCAGGTGACGCGCCATATCTGCGTAGAGGGTTGGAGTGCGATCGGCAAGTGGGGC
GGAGTGCCGTTCGCGGAATTTCTCCAGGCGATCGGTGCGGACCTGAGCGCCAAATATGTCAGTTTCAAATGCGCCGACGA
TTACTACACCAGCATCGATATGGCCACGGCGCTGCATCCACAAACCATTATGGCGCTGACCTACGACGGCCAGATCTTGC
CGCGAAAATACGGCTATCCGATGAAGCTGCGTATGCCGACCAAGCTCGGCTACAAGAATCCGAAACATATTCAGGTGATT
GAAGTCACCAACCGCTTTCCCGGCGGTTACTGGGAAGATCAAGGTTACAACTGGTTTGGCGGCAGCTAA

Upstream 100 bases:

>100_bases
ATGTCGGGGCTGGTGGGTTTTGTGGTGGTGCATCTGGTGATGGTGGCTTTGGTGCCACGCACGCTGTTGGCCATGCTGCG
TGGACGTTAAGGAGAGCCTG

Downstream 100 bases:

>100_bases
AGGCGGCCACAACTATCCCCGGCACACAGGTGCTTTTTAAATGAGAGAAGGAAATACCATGAAAAAGTTATTCGCAGTGA
TGATGTGCAGCGCGTTGATG

Product: molybdopterin-binding oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 262; Mature: 262

Protein sequence:

>262_residues
MKAQKQPISLSEGQEIVREAQQLLARQLESSSRRRFLRNGLTLGGIAMLTGCDISDNTNVEQALSRISRFNDRVQGWLFN
ADHLAPVYAESMITRPFPFNAFYAEDQAPEINGDDYRLEVNGLVLNKQPWTLPQLHKMTQISQVTRHICVEGWSAIGKWG
GVPFAEFLQAIGADLSAKYVSFKCADDYYTSIDMATALHPQTIMALTYDGQILPRKYGYPMKLRMPTKLGYKNPKHIQVI
EVTNRFPGGYWEDQGYNWFGGS

Sequences:

>Translated_262_residues
MKAQKQPISLSEGQEIVREAQQLLARQLESSSRRRFLRNGLTLGGIAMLTGCDISDNTNVEQALSRISRFNDRVQGWLFN
ADHLAPVYAESMITRPFPFNAFYAEDQAPEINGDDYRLEVNGLVLNKQPWTLPQLHKMTQISQVTRHICVEGWSAIGKWG
GVPFAEFLQAIGADLSAKYVSFKCADDYYTSIDMATALHPQTIMALTYDGQILPRKYGYPMKLRMPTKLGYKNPKHIQVI
EVTNRFPGGYWEDQGYNWFGGS
>Mature_262_residues
MKAQKQPISLSEGQEIVREAQQLLARQLESSSRRRFLRNGLTLGGIAMLTGCDISDNTNVEQALSRISRFNDRVQGWLFN
ADHLAPVYAESMITRPFPFNAFYAEDQAPEINGDDYRLEVNGLVLNKQPWTLPQLHKMTQISQVTRHICVEGWSAIGKWG
GVPFAEFLQAIGADLSAKYVSFKCADDYYTSIDMATALHPQTIMALTYDGQILPRKYGYPMKLRMPTKLGYKNPKHIQVI
EVTNRFPGGYWEDQGYNWFGGS

Specific function: The exact function is not known. Can catalyze the reduction of a variety of substrates like dimethyl sulfoxide, trimethylamine N-oxide, phenylmethyl sulfoxide and L-methionine sulfoxide. Cannot reduce cyclic N-oxides. Shows no activity as sulfite oxidase

COG id: COG2041

COG function: function code R; Sulfite oxidase and related enzymes

Gene ontology:

Cell location: Periplasm. Note=Is attached to the inner membrane when interacting with the yedZ subunit (By similarity) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yedY family [H]

Homologues:

Organism=Escherichia coli, GI1788282, Length=167, Percent_Identity=26.9461077844311, Blast_Score=62, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000572
- InterPro:   IPR006311
- InterPro:   IPR022867 [H]

Pfam domain/function: PF00174 Oxidored_molyb [H]

EC number: NA

Molecular weight: Translated: 29691; Mature: 29691

Theoretical pI: Translated: 8.05; Mature: 8.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAQKQPISLSEGQEIVREAQQLLARQLESSSRRRFLRNGLTLGGIAMLTGCDISDNTNV
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCH
EQALSRISRFNDRVQGWLFNADHLAPVYAESMITRPFPFNAFYAEDQAPEINGDDYRLEV
HHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHCCCCCCCEEECCCCCCCCCCCEEEEEE
NGLVLNKQPWTLPQLHKMTQISQVTRHICVEGWSAIGKWGGVPFAEFLQAIGADLSAKYV
EEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEE
SFKCADDYYTSIDMATALHPQTIMALTYDGQILPRKYGYPMKLRMPTKLGYKNPKHIQVI
EEEECCCHHHHHHHHHHCCCCEEEEEEECCEECCCCCCCCEEEECCHHCCCCCCCEEEEE
EVTNRFPGGYWEDQGYNWFGGS
EECCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKAQKQPISLSEGQEIVREAQQLLARQLESSSRRRFLRNGLTLGGIAMLTGCDISDNTNV
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCH
EQALSRISRFNDRVQGWLFNADHLAPVYAESMITRPFPFNAFYAEDQAPEINGDDYRLEV
HHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHCCCCCCCEEECCCCCCCCCCCEEEEEE
NGLVLNKQPWTLPQLHKMTQISQVTRHICVEGWSAIGKWGGVPFAEFLQAIGADLSAKYV
EEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEE
SFKCADDYYTSIDMATALHPQTIMALTYDGQILPRKYGYPMKLRMPTKLGYKNPKHIQVI
EEEECCCHHHHHHHHHHCCCCEEEEEEECCEECCCCCCCCEEEECCHHCCCCCCCEEEEE
EVTNRFPGGYWEDQGYNWFGGS
EECCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Mo [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA