| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is yedY [H]
Identifier: 157369753
GI number: 157369753
Start: 1645272
End: 1646060
Strand: Direct
Name: yedY [H]
Synonym: Spro_1510
Alternate gene names: 157369753
Gene position: 1645272-1646060 (Clockwise)
Preceding gene: 157369752
Following gene: 157369754
Centisome position: 30.19
GC content: 56.65
Gene sequence:
>789_bases ATGAAAGCACAGAAACAGCCAATAAGCCTGAGTGAAGGGCAAGAGATCGTCAGAGAGGCGCAGCAACTGCTGGCACGCCA GCTGGAGTCTTCTTCGCGGCGGCGCTTCCTGCGCAACGGGCTGACGCTGGGGGGAATTGCCATGCTCACCGGGTGTGACA TCAGCGACAACACCAATGTCGAACAGGCGCTGAGCCGCATCTCACGCTTTAACGATCGGGTACAGGGCTGGCTGTTCAAT GCCGACCATCTGGCGCCGGTATATGCCGAGTCGATGATCACTCGTCCGTTCCCGTTCAACGCGTTTTATGCCGAGGATCA GGCACCGGAGATCAATGGCGACGACTACCGGCTGGAGGTCAACGGACTGGTGCTGAATAAGCAGCCCTGGACGCTGCCGC AATTGCACAAGATGACGCAAATCAGTCAGGTGACGCGCCATATCTGCGTAGAGGGTTGGAGTGCGATCGGCAAGTGGGGC GGAGTGCCGTTCGCGGAATTTCTCCAGGCGATCGGTGCGGACCTGAGCGCCAAATATGTCAGTTTCAAATGCGCCGACGA TTACTACACCAGCATCGATATGGCCACGGCGCTGCATCCACAAACCATTATGGCGCTGACCTACGACGGCCAGATCTTGC CGCGAAAATACGGCTATCCGATGAAGCTGCGTATGCCGACCAAGCTCGGCTACAAGAATCCGAAACATATTCAGGTGATT GAAGTCACCAACCGCTTTCCCGGCGGTTACTGGGAAGATCAAGGTTACAACTGGTTTGGCGGCAGCTAA
Upstream 100 bases:
>100_bases ATGTCGGGGCTGGTGGGTTTTGTGGTGGTGCATCTGGTGATGGTGGCTTTGGTGCCACGCACGCTGTTGGCCATGCTGCG TGGACGTTAAGGAGAGCCTG
Downstream 100 bases:
>100_bases AGGCGGCCACAACTATCCCCGGCACACAGGTGCTTTTTAAATGAGAGAAGGAAATACCATGAAAAAGTTATTCGCAGTGA TGATGTGCAGCGCGTTGATG
Product: molybdopterin-binding oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 262; Mature: 262
Protein sequence:
>262_residues MKAQKQPISLSEGQEIVREAQQLLARQLESSSRRRFLRNGLTLGGIAMLTGCDISDNTNVEQALSRISRFNDRVQGWLFN ADHLAPVYAESMITRPFPFNAFYAEDQAPEINGDDYRLEVNGLVLNKQPWTLPQLHKMTQISQVTRHICVEGWSAIGKWG GVPFAEFLQAIGADLSAKYVSFKCADDYYTSIDMATALHPQTIMALTYDGQILPRKYGYPMKLRMPTKLGYKNPKHIQVI EVTNRFPGGYWEDQGYNWFGGS
Sequences:
>Translated_262_residues MKAQKQPISLSEGQEIVREAQQLLARQLESSSRRRFLRNGLTLGGIAMLTGCDISDNTNVEQALSRISRFNDRVQGWLFN ADHLAPVYAESMITRPFPFNAFYAEDQAPEINGDDYRLEVNGLVLNKQPWTLPQLHKMTQISQVTRHICVEGWSAIGKWG GVPFAEFLQAIGADLSAKYVSFKCADDYYTSIDMATALHPQTIMALTYDGQILPRKYGYPMKLRMPTKLGYKNPKHIQVI EVTNRFPGGYWEDQGYNWFGGS >Mature_262_residues MKAQKQPISLSEGQEIVREAQQLLARQLESSSRRRFLRNGLTLGGIAMLTGCDISDNTNVEQALSRISRFNDRVQGWLFN ADHLAPVYAESMITRPFPFNAFYAEDQAPEINGDDYRLEVNGLVLNKQPWTLPQLHKMTQISQVTRHICVEGWSAIGKWG GVPFAEFLQAIGADLSAKYVSFKCADDYYTSIDMATALHPQTIMALTYDGQILPRKYGYPMKLRMPTKLGYKNPKHIQVI EVTNRFPGGYWEDQGYNWFGGS
Specific function: The exact function is not known. Can catalyze the reduction of a variety of substrates like dimethyl sulfoxide, trimethylamine N-oxide, phenylmethyl sulfoxide and L-methionine sulfoxide. Cannot reduce cyclic N-oxides. Shows no activity as sulfite oxidase
COG id: COG2041
COG function: function code R; Sulfite oxidase and related enzymes
Gene ontology:
Cell location: Periplasm. Note=Is attached to the inner membrane when interacting with the yedZ subunit (By similarity) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the yedY family [H]
Homologues:
Organism=Escherichia coli, GI1788282, Length=167, Percent_Identity=26.9461077844311, Blast_Score=62, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000572 - InterPro: IPR006311 - InterPro: IPR022867 [H]
Pfam domain/function: PF00174 Oxidored_molyb [H]
EC number: NA
Molecular weight: Translated: 29691; Mature: 29691
Theoretical pI: Translated: 8.05; Mature: 8.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAQKQPISLSEGQEIVREAQQLLARQLESSSRRRFLRNGLTLGGIAMLTGCDISDNTNV CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCH EQALSRISRFNDRVQGWLFNADHLAPVYAESMITRPFPFNAFYAEDQAPEINGDDYRLEV HHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHCCCCCCCEEECCCCCCCCCCCEEEEEE NGLVLNKQPWTLPQLHKMTQISQVTRHICVEGWSAIGKWGGVPFAEFLQAIGADLSAKYV EEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEE SFKCADDYYTSIDMATALHPQTIMALTYDGQILPRKYGYPMKLRMPTKLGYKNPKHIQVI EEEECCCHHHHHHHHHHCCCCEEEEEEECCEECCCCCCCCEEEECCHHCCCCCCCEEEEE EVTNRFPGGYWEDQGYNWFGGS EECCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKAQKQPISLSEGQEIVREAQQLLARQLESSSRRRFLRNGLTLGGIAMLTGCDISDNTNV CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCH EQALSRISRFNDRVQGWLFNADHLAPVYAESMITRPFPFNAFYAEDQAPEINGDDYRLEV HHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHCCCCCCCEEECCCCCCCCCCCEEEEEE NGLVLNKQPWTLPQLHKMTQISQVTRHICVEGWSAIGKWGGVPFAEFLQAIGADLSAKYV EEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEE SFKCADDYYTSIDMATALHPQTIMALTYDGQILPRKYGYPMKLRMPTKLGYKNPKHIQVI EEEECCCHHHHHHHHHHCCCCEEEEEEECCEECCCCCCCCEEEECCHHCCCCCCCEEEEE EVTNRFPGGYWEDQGYNWFGGS EECCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: Mo [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA