| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is 157369687
Identifier: 157369687
GI number: 157369687
Start: 1577484
End: 1578551
Strand: Direct
Name: 157369687
Synonym: Spro_1444
Alternate gene names: NA
Gene position: 1577484-1578551 (Clockwise)
Preceding gene: 157369685
Following gene: 157369688
Centisome position: 28.95
GC content: 57.21
Gene sequence:
>1068_bases ATGTCCTCAGCCAAAAGCCACAGCCACTATTTGCATCCTGCCCAACGCCTCTGGATACAGCAGCTTAACCAGCGTTGGTC CTGGCGGCTGGAGCTGCCGACCTGGGGCATTATGGCGGCGGTTTACGGCGGCTGGTTTGGCGTGGTGCAGTACTGGCAGA CGCTGGGGCCGTGGCTGGGCACGCCATTGCTAATCCTGCTGACCACCTGGTATATGTCGCTGCAACACGAGCTGATCCAC GGTCATCCCACGCGCTGGCCGCGGCTCAATCAGTTATTCGGCCTGCTGCCGTTGGCGGTGTGGTATCCCTACGGGTTGTA TCGCGATACGCATATTCAGCACCATCGCAATGAACATCTGACCATTCCGCATGAAGATCCCGAAAGCTATTACTTCAGCC AGGTGCAGTGGCAGCGTTTCCCTCGGTTGTACCCGTTGTTGGCCAGGGTACGCAATACGCTGAGCGGGCGCGTGCTGTTA GGCCCGGCACTGGATATCGTCGCCACCGGGGTGAATGCGGCCAAAGCGATTGCCGCCGGTGAATTACGCACTCTGACGAT GTGGCTGGTGCATTTGCTGCTGCTGGCGGGGGTATTGAGCTGGCTACAACAGCACGGCATTGGCGTGGCGTTTTACCTGC TGGCCATCAGCTATCCGGCGTTGGCACTGACCAAGGTGAGATCGTTTTTTGAGCATCGTGCCGTTGAAGCTCCGCAGGCA CGTTCTATTATTAATGAGGCAGCCTGGCCGTGGCGGCTGCTGTTTCTTAATCTGAACTATCATTTAGTTCACCATGATCT CCCCGGCTTACCGTGGTACGGTTTACGGCAGGTGTATCTGGCGGAGCGTGATGAATACCGGCAGCGCAGCCAGGGATTTG TGGTGGCAGGCTATGGCCAGTGGGTAAGTGAATACGCGTTTACCCCGGTTGCCGTTGAGGTTCATCCGTTCAATGCCGGC GTGCTGCCAGGGGAAACACAGGGCGAAAATGAAGCCTGGCCGGCAGAGACATTTATTGTGCGATGGAAGCGCGCTTCTCA AGATTTTCCAATCGATCTGGCCAAATAG
Upstream 100 bases:
>100_bases GCAACTAGCTGATTTTTAACTTTGCTATGCCGCTTTCGTTATTTTGAGCGCTCCTGCCGCTCGCTGATACTGGGGAAAAT CTCATACAGCGAGCCAGAGC
Downstream 100 bases:
>100_bases CCGGGAAATACACAACAAGAGGAAAAAATATGGCAATCACCCCCTCACGTGGTCGCGTATTAGCTTTGGCACTGAGCTTA CTCGCTGCCAGCATCGGCGT
Product: fatty acid desaturase
Products: NA
Alternate protein names: Fatty Acid Desaturase Domain Protein; Fatty Acid Desaturase Family Protein; Fatty Acid Desaturase Domain-Containing Protein; Beta-Carotene Ketolase; Fatty Acid Desaturase Subfamily
Number of amino acids: Translated: 355; Mature: 354
Protein sequence:
>355_residues MSSAKSHSHYLHPAQRLWIQQLNQRWSWRLELPTWGIMAAVYGGWFGVVQYWQTLGPWLGTPLLILLTTWYMSLQHELIH GHPTRWPRLNQLFGLLPLAVWYPYGLYRDTHIQHHRNEHLTIPHEDPESYYFSQVQWQRFPRLYPLLARVRNTLSGRVLL GPALDIVATGVNAAKAIAAGELRTLTMWLVHLLLLAGVLSWLQQHGIGVAFYLLAISYPALALTKVRSFFEHRAVEAPQA RSIINEAAWPWRLLFLNLNYHLVHHDLPGLPWYGLRQVYLAERDEYRQRSQGFVVAGYGQWVSEYAFTPVAVEVHPFNAG VLPGETQGENEAWPAETFIVRWKRASQDFPIDLAK
Sequences:
>Translated_355_residues MSSAKSHSHYLHPAQRLWIQQLNQRWSWRLELPTWGIMAAVYGGWFGVVQYWQTLGPWLGTPLLILLTTWYMSLQHELIH GHPTRWPRLNQLFGLLPLAVWYPYGLYRDTHIQHHRNEHLTIPHEDPESYYFSQVQWQRFPRLYPLLARVRNTLSGRVLL GPALDIVATGVNAAKAIAAGELRTLTMWLVHLLLLAGVLSWLQQHGIGVAFYLLAISYPALALTKVRSFFEHRAVEAPQA RSIINEAAWPWRLLFLNLNYHLVHHDLPGLPWYGLRQVYLAERDEYRQRSQGFVVAGYGQWVSEYAFTPVAVEVHPFNAG VLPGETQGENEAWPAETFIVRWKRASQDFPIDLAK >Mature_354_residues SSAKSHSHYLHPAQRLWIQQLNQRWSWRLELPTWGIMAAVYGGWFGVVQYWQTLGPWLGTPLLILLTTWYMSLQHELIHG HPTRWPRLNQLFGLLPLAVWYPYGLYRDTHIQHHRNEHLTIPHEDPESYYFSQVQWQRFPRLYPLLARVRNTLSGRVLLG PALDIVATGVNAAKAIAAGELRTLTMWLVHLLLLAGVLSWLQQHGIGVAFYLLAISYPALALTKVRSFFEHRAVEAPQAR SIINEAAWPWRLLFLNLNYHLVHHDLPGLPWYGLRQVYLAERDEYRQRSQGFVVAGYGQWVSEYAFTPVAVEVHPFNAGV LPGETQGENEAWPAETFIVRWKRASQDFPIDLAK
Specific function: Unknown
COG id: COG3239
COG function: function code I; Fatty acid desaturase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41089; Mature: 40958
Theoretical pI: Translated: 9.39; Mature: 9.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSAKSHSHYLHPAQRLWIQQLNQRWSWRLELPTWGIMAAVYGGWFGVVQYWQTLGPWLG CCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH TPLLILLTTWYMSLQHELIHGHPTRWPRLNQLFGLLPLAVWYPYGLYRDTHIQHHRNEHL HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCE TIPHEDPESYYFSQVQWQRFPRLYPLLARVRNTLSGRVLLGPALDIVATGVNAAKAIAAG ECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEECCHHHHHHCCCHHHHHHHHH ELRTLTMWLVHLLLLAGVLSWLQQHGIGVAFYLLAISYPALALTKVRSFFEHRAVEAPQA HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH RSIINEAAWPWRLLFLNLNYHLVHHDLPGLPWYGLRQVYLAERDEYRQRSQGFVVAGYGQ HHHHHHCCCCEEEEEEECCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEHHH WVSEYAFTPVAVEVHPFNAGVLPGETQGENEAWPAETFIVRWKRASQDFPIDLAK HHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHEEEHHCCCCCCCCCCC >Mature Secondary Structure SSAKSHSHYLHPAQRLWIQQLNQRWSWRLELPTWGIMAAVYGGWFGVVQYWQTLGPWLG CCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH TPLLILLTTWYMSLQHELIHGHPTRWPRLNQLFGLLPLAVWYPYGLYRDTHIQHHRNEHL HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCE TIPHEDPESYYFSQVQWQRFPRLYPLLARVRNTLSGRVLLGPALDIVATGVNAAKAIAAG ECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEECCHHHHHHCCCHHHHHHHHH ELRTLTMWLVHLLLLAGVLSWLQQHGIGVAFYLLAISYPALALTKVRSFFEHRAVEAPQA HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH RSIINEAAWPWRLLFLNLNYHLVHHDLPGLPWYGLRQVYLAERDEYRQRSQGFVVAGYGQ HHHHHHCCCCEEEEEEECCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEHHH WVSEYAFTPVAVEVHPFNAGVLPGETQGENEAWPAETFIVRWKRASQDFPIDLAK HHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHEEEHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA