| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is yehS [H]
Identifier: 157369657
GI number: 157369657
Start: 1540498
End: 1541001
Strand: Direct
Name: yehS [H]
Synonym: Spro_1414
Alternate gene names: 157369657
Gene position: 1540498-1541001 (Clockwise)
Preceding gene: 157369656
Following gene: 157369661
Centisome position: 28.27
GC content: 53.37
Gene sequence:
>504_bases ATGTGCGCGCCTTCCGGTTTACAAGCTAAAGGCAATTCTATGATCAACAATGACGTGCTGCGCAGCGTGCGCTACATGCT GGGTATCAACGACGCGAAAATGGTTGAGATTATCAAGCTGGATAATTTCGACGTTGCGGTCTCGGCAATGAGCACTTACG TCATCAAGGAAGGCGAGCCGGGGTTCGAAAACTGCCCTGACGAAGTGATGGCGCACTTCCTGAACGGTCTGGTGTTCTTC AAACGTGGCAAGGACGACAAGTTCCCGGCGCCGGAAGTGGAGCTGCCAATCACCAACAATCTGGTGTTGAAAAAACTGCG TGTGGCCTTCGAGTTGAAAGACACCGACATGCACCAGATCTTCACCGCCGTGGAATTCCGCATTTCCAAGCCGGAACTGA GCGCGCTGTTCCGCAAAGAAGGCACCAAAAACTTCCGTCCTTGTGGCGATCAGATGCTGCGCTATTTCCTCAAAGGGTTA GCGCAACGCCTGCGCGGCGCATAA
Upstream 100 bases:
>100_bases ATCCCGCTGTATCAGCAAAAAAGCCAAATCGATTGAGAAACCCGGCTCTGATCCCTATACTGCCGCACATATTCAAGGCG TAGCAGTATAGGGTATTACA
Downstream 100 bases:
>100_bases GTCACGCCGCTCTTTATGGCACCGGCTTTCCAACGCCAACATTCTGTTGGCGTTAGTCTGATGACAAACACCCGAAAAAC GTGGTTTTCGGATGTTTGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 167; Mature: 167
Protein sequence:
>167_residues MCAPSGLQAKGNSMINNDVLRSVRYMLGINDAKMVEIIKLDNFDVAVSAMSTYVIKEGEPGFENCPDEVMAHFLNGLVFF KRGKDDKFPAPEVELPITNNLVLKKLRVAFELKDTDMHQIFTAVEFRISKPELSALFRKEGTKNFRPCGDQMLRYFLKGL AQRLRGA
Sequences:
>Translated_167_residues MCAPSGLQAKGNSMINNDVLRSVRYMLGINDAKMVEIIKLDNFDVAVSAMSTYVIKEGEPGFENCPDEVMAHFLNGLVFF KRGKDDKFPAPEVELPITNNLVLKKLRVAFELKDTDMHQIFTAVEFRISKPELSALFRKEGTKNFRPCGDQMLRYFLKGL AQRLRGA >Mature_167_residues MCAPSGLQAKGNSMINNDVLRSVRYMLGINDAKMVEIIKLDNFDVAVSAMSTYVIKEGEPGFENCPDEVMAHFLNGLVFF KRGKDDKFPAPEVELPITNNLVLKKLRVAFELKDTDMHQIFTAVEFRISKPELSALFRKEGTKNFRPCGDQMLRYFLKGL AQRLRGA
Specific function: Unknown
COG id: COG4807
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788443, Length=150, Percent_Identity=52, Blast_Score=166, Evalue=9e-43,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009921 [H]
Pfam domain/function: PF07308 DUF1456 [H]
EC number: NA
Molecular weight: Translated: 18879; Mature: 18879
Theoretical pI: Translated: 8.84; Mature: 8.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCAPSGLQAKGNSMINNDVLRSVRYMLGINDAKMVEIIKLDNFDVAVSAMSTYVIKEGEP CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHEEEEEEECCCHHHHHHHHHHEEECCCC GFENCPDEVMAHFLNGLVFFKRGKDDKFPAPEVELPITNNLVLKKLRVAFELKDTDMHQI CCCCCHHHHHHHHHHHHEEEECCCCCCCCCCCEECCCCCHHHHHHHHHHHCCCCCHHHHH FTAVEFRISKPELSALFRKEGTKNFRPCGDQMLRYFLKGLAQRLRGA HHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MCAPSGLQAKGNSMINNDVLRSVRYMLGINDAKMVEIIKLDNFDVAVSAMSTYVIKEGEP CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHEEEEEEECCCHHHHHHHHHHEEECCCC GFENCPDEVMAHFLNGLVFFKRGKDDKFPAPEVELPITNNLVLKKLRVAFELKDTDMHQI CCCCCHHHHHHHHHHHHEEEECCCCCCCCCCCEECCCCCHHHHHHHHHHHCCCCCHHHHH FTAVEFRISKPELSALFRKEGTKNFRPCGDQMLRYFLKGLAQRLRGA HHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]