| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
Click here to switch to the map view.
The map label for this gene is metQ [H]
Identifier: 157369638
GI number: 157369638
Start: 1521935
End: 1522756
Strand: Reverse
Name: metQ [H]
Synonym: Spro_1395
Alternate gene names: 157369638
Gene position: 1522756-1521935 (Counterclockwise)
Preceding gene: 157369639
Following gene: 157369636
Centisome position: 27.95
GC content: 54.38
Gene sequence:
>822_bases ATGATGAAAAAGCAAATAATGATGCTGGCTTTCGCCTCACTGACCGCGTTGAGCTCCTTTGGCGCCGCCGCGGAAACCAG GCTGGTGGTGGGCGCGTCCAACGTGCCGCACGCGGAGATCCTCGAGCAGGCCAAGCCGATTCTGGCGAAGGAAGGCATCG ATCTGGTGATCAAACCTTTCCAGGACTACATCCTGCCGAACACCGCGCTGGCCAGTCACGATATTGACGCCAACTATTTC CAGCACGTGCCCTACCTGAATTCGGTGCTGAAGGACCATGCCGGCGATAAGAGTTACGACTTTGTCAGCGCCGGGGCCAT CCATATCGAGCCGATCGGCATTTACTCCAAGAAATATAAAAGCCTGAAAGATCTGCCGGACAACGGCAAAATCATCATGC GTGATGCAGTGGCGGAAGAAGGACGCATTCTGTCTATCTTTGAAAAGGAAGGCGTAATTAAGCTGAAACCGGGCGTGAGC AAGGTCGATGCTCGCATTTCTGACGTGGTGGAAAACCCGAAACACCTGAAGTTCCTGGCGAACGTGGAAGGCGCGCTACT GCCGCAGATGTACAACAACGATGAAGGCGACGCGGTGGTGATTAACGCCAACTACGCCATCGATGCCGGACTGAACCCGA CCAAAGATCCGATCGCGGTCGAAAGCGGTGAAAACAACCCGTATGCCAACATTATCACCGTGCATAAGGCCGACGTGAAC AAGCCGGAAATCGTAGCGCTGGTGAAAGTGCTGCACTCCAAGGCGATTCAGGACTTCATCCGTCAAAAATACCAGGGCGC GGTGATCCCGGTTAACCAGTAA
Upstream 100 bases:
>100_bases TAGCGACGCTGACGATCCTGCTGATCGTTTTCGTTATCCAGTTCATCGGCGACACCATTACAACAACGCTCGATAAACGA TAAATAACCAGGGAATAATG
Downstream 100 bases:
>100_bases TGCCCACTCAGGCCGCAGCGATGCGGCCTGATTTCCTGGCGAGTACCCTTCCCTAGACCTTATTGCCCACCTGACTCAGG CGCGGCCAAACCAGCATCAA
Product: NLPA lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 273; Mature: 273
Protein sequence:
>273_residues MMKKQIMMLAFASLTALSSFGAAAETRLVVGASNVPHAEILEQAKPILAKEGIDLVIKPFQDYILPNTALASHDIDANYF QHVPYLNSVLKDHAGDKSYDFVSAGAIHIEPIGIYSKKYKSLKDLPDNGKIIMRDAVAEEGRILSIFEKEGVIKLKPGVS KVDARISDVVENPKHLKFLANVEGALLPQMYNNDEGDAVVINANYAIDAGLNPTKDPIAVESGENNPYANIITVHKADVN KPEIVALVKVLHSKAIQDFIRQKYQGAVIPVNQ
Sequences:
>Translated_273_residues MMKKQIMMLAFASLTALSSFGAAAETRLVVGASNVPHAEILEQAKPILAKEGIDLVIKPFQDYILPNTALASHDIDANYF QHVPYLNSVLKDHAGDKSYDFVSAGAIHIEPIGIYSKKYKSLKDLPDNGKIIMRDAVAEEGRILSIFEKEGVIKLKPGVS KVDARISDVVENPKHLKFLANVEGALLPQMYNNDEGDAVVINANYAIDAGLNPTKDPIAVESGENNPYANIITVHKADVN KPEIVALVKVLHSKAIQDFIRQKYQGAVIPVNQ >Mature_273_residues MMKKQIMMLAFASLTALSSFGAAAETRLVVGASNVPHAEILEQAKPILAKEGIDLVIKPFQDYILPNTALASHDIDANYF QHVPYLNSVLKDHAGDKSYDFVSAGAIHIEPIGIYSKKYKSLKDLPDNGKIIMRDAVAEEGRILSIFEKEGVIKLKPGVS KVDARISDVVENPKHLKFLANVEGALLPQMYNNDEGDAVVINANYAIDAGLNPTKDPIAVESGENNPYANIITVHKADVN KPEIVALVKVLHSKAIQDFIRQKYQGAVIPVNQ
Specific function: Part of the ABC transporter complex metNIQ involved in methionine import. Binds the methionine and transfers it to the membrane-bound permease. It has also been shown to be involved in methionine sulfoxide transport (Probable) [H]
COG id: COG1464
COG function: function code P; ABC-type metal ion transport system, periplasmic component/surface antigen
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nlpA lipoprotein family [H]
Homologues:
Organism=Escherichia coli, GI1786396, Length=220, Percent_Identity=37.7272727272727, Blast_Score=134, Evalue=8e-33, Organism=Escherichia coli, GI1790093, Length=243, Percent_Identity=28.8065843621399, Blast_Score=107, Evalue=9e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004872 [H]
Pfam domain/function: PF03180 Lipoprotein_9 [H]
EC number: NA
Molecular weight: Translated: 29809; Mature: 29809
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKKQIMMLAFASLTALSSFGAAAETRLVVGASNVPHAEILEQAKPILAKEGIDLVIKPF CCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHCCHHHHCCCCEEEECH QDYILPNTALASHDIDANYFQHVPYLNSVLKDHAGDKSYDFVSAGAIHIEPIGIYSKKYK HHHCCCCCHHCCCCCCCHHHHHCHHHHHHHHHCCCCCCCCEEECCEEEEEECCCHHHHHH SLKDLPDNGKIIMRDAVAEEGRILSIFEKEGVIKLKPGVSKVDARISDVVENPKHLKFLA HHHCCCCCCCEEEEECCCCCCCEEEEEECCCEEEECCCCHHHHHHHHHHHCCHHHEEEEE NVEGALLPQMYNNDEGDAVVINANYAIDAGLNPTKDPIAVESGENNPYANIITVHKADVN CCCCCCCHHHHCCCCCCEEEEECCEEEECCCCCCCCCEEEECCCCCCCEEEEEEEECCCC KPEIVALVKVLHSKAIQDFIRQKYQGAVIPVNQ CHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCC >Mature Secondary Structure MMKKQIMMLAFASLTALSSFGAAAETRLVVGASNVPHAEILEQAKPILAKEGIDLVIKPF CCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHCCHHHHCCCCEEEECH QDYILPNTALASHDIDANYFQHVPYLNSVLKDHAGDKSYDFVSAGAIHIEPIGIYSKKYK HHHCCCCCHHCCCCCCCHHHHHCHHHHHHHHHCCCCCCCCEEECCEEEEEECCCHHHHHH SLKDLPDNGKIIMRDAVAEEGRILSIFEKEGVIKLKPGVSKVDARISDVVENPKHLKFLA HHHCCCCCCCEEEEECCCCCCCEEEEEECCCEEEECCCCHHHHHHHHHHHCCHHHEEEEE NVEGALLPQMYNNDEGDAVVINANYAIDAGLNPTKDPIAVESGENNPYANIITVHKADVN CCCCCCCHHHHCCCCCCEEEEECCEEEECCCCCCCCCEEEECCCCCCCEEEEEEEECCCC KPEIVALVKVLHSKAIQDFIRQKYQGAVIPVNQ CHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]