| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is yedI [H]
Identifier: 157369598
GI number: 157369598
Start: 1485546
End: 1486466
Strand: Direct
Name: yedI [H]
Synonym: Spro_1355
Alternate gene names: 157369598
Gene position: 1485546-1486466 (Clockwise)
Preceding gene: 157369596
Following gene: 157369606
Centisome position: 27.26
GC content: 58.85
Gene sequence:
>921_bases TTGGCCGGAAGTAGCTTACTGACGTTAATCGACGATATCGCCTCACTGCTGGACGATGTCTCGCTGATGACCAAAATGGC GGCGAAAAAAACCGCCGGGGTACTGGGGGACGATCTGGCGCTGAATGCGCAACAGGTTTCCGGGGTAAAGGCCGATCGCG AGCTGCCGGTGGTGTGGAGCGTGGCCAAAGGGTCGTTTATCAACAAGGCGATCCTGGTGCCGCTGGCGTTGCTGATCAGT GCATTCGCCCCTTGGGCAATTACGCCGCTGTTGATGGTGGGCGGTGCCTACCTGTGCTACGAAGGCTTTGAGAAGGTGTT TCATAGCCTGACTCACAAAAAGCAGGCCGGGGAGGATAACTCAGAAGCGCTGGACGCCAACGAAGACGTGGCGGCCTACG AACAACGCAAAGTGAAGGGAGCAATACGGACTGACTTTGTGCTGTCCGCCGAGATTATTGCCATTACGCTGGGCACCGTG GCGGGAGCGACCTTCAGCCAGCAGGTGATCGTGCTGTGCGGCATCGCGCTGGTGATGACGGTGGGGGTTTACGGCATTGT GGCCGGCATCGTCAAACTTGACGATCTGGGGCTGTATCTGAGCCGTAAAAGCAGCGCGTTAGCCCGTTCTGTCGGTAGCG GCATCGTCAGCGCCGCGCCTTACCTGATGAAGACCCTGTCGGTGGTCGGTACCATCGCCATGTTTATGGTCGGTGGCGGT ATCCTGACTCACGGGCTGCCGCCGGTGCATCATCTGTTTGAGGACTGGGCGTCCTATGCCACCGTGGTGCCGACCTTCGG CCAGATCTTGCAGGGGGTTATTCCTGCTTTGCTCAACGTGGTGTTTGGCCTGATTGCCGGCGGCGTGGTGCTGCTGGTGG TTTCGGCTCTCGGTGCCATTCGTGGCCGTTTAAAAGCCTGA
Upstream 100 bases:
>100_bases AATAAAATGCCTCTGCCTGACCATCAGAATGGATATTTGGGCACAGTTGCCGCTATGCTAAACAGGTGACAACCGATGAA TATGAAAAGGATGAACCGCT
Downstream 100 bases:
>100_bases TAATTTCACCGGGTGCATCTTCTGCACCCGGTTTATCCATTGTGCGGCAGCCCATCACTACCTTCGCCCAGGGTGCGTTG CATGATGTGGGTGTCGCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 306; Mature: 305
Protein sequence:
>306_residues MAGSSLLTLIDDIASLLDDVSLMTKMAAKKTAGVLGDDLALNAQQVSGVKADRELPVVWSVAKGSFINKAILVPLALLIS AFAPWAITPLLMVGGAYLCYEGFEKVFHSLTHKKQAGEDNSEALDANEDVAAYEQRKVKGAIRTDFVLSAEIIAITLGTV AGATFSQQVIVLCGIALVMTVGVYGIVAGIVKLDDLGLYLSRKSSALARSVGSGIVSAAPYLMKTLSVVGTIAMFMVGGG ILTHGLPPVHHLFEDWASYATVVPTFGQILQGVIPALLNVVFGLIAGGVVLLVVSALGAIRGRLKA
Sequences:
>Translated_306_residues MAGSSLLTLIDDIASLLDDVSLMTKMAAKKTAGVLGDDLALNAQQVSGVKADRELPVVWSVAKGSFINKAILVPLALLIS AFAPWAITPLLMVGGAYLCYEGFEKVFHSLTHKKQAGEDNSEALDANEDVAAYEQRKVKGAIRTDFVLSAEIIAITLGTV AGATFSQQVIVLCGIALVMTVGVYGIVAGIVKLDDLGLYLSRKSSALARSVGSGIVSAAPYLMKTLSVVGTIAMFMVGGG ILTHGLPPVHHLFEDWASYATVVPTFGQILQGVIPALLNVVFGLIAGGVVLLVVSALGAIRGRLKA >Mature_305_residues AGSSLLTLIDDIASLLDDVSLMTKMAAKKTAGVLGDDLALNAQQVSGVKADRELPVVWSVAKGSFINKAILVPLALLISA FAPWAITPLLMVGGAYLCYEGFEKVFHSLTHKKQAGEDNSEALDANEDVAAYEQRKVKGAIRTDFVLSAEIIAITLGTVA GATFSQQVIVLCGIALVMTVGVYGIVAGIVKLDDLGLYLSRKSSALARSVGSGIVSAAPYLMKTLSVVGTIAMFMVGGGI LTHGLPPVHHLFEDWASYATVVPTFGQILQGVIPALLNVVFGLIAGGVVLLVVSALGAIRGRLKA
Specific function: Unknown
COG id: COG2354
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788268, Length=308, Percent_Identity=61.038961038961, Blast_Score=367, Evalue=1e-103,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008526 [H]
Pfam domain/function: PF05661 DUF808 [H]
EC number: NA
Molecular weight: Translated: 31862; Mature: 31731
Theoretical pI: Translated: 7.06; Mature: 7.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGSSLLTLIDDIASLLDDVSLMTKMAAKKTAGVLGDDLALNAQQVSGVKADRELPVVWS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCHHHHCCCCCCCCCCEEEE VAKGSFINKAILVPLALLISAFAPWAITPLLMVGGAYLCYEGFEKVFHSLTHKKQAGEDN ECCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCC SEALDANEDVAAYEQRKVKGAIRTDFVLSAEIIAITLGTVAGATFSQQVIVLCGIALVMT CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH VGVYGIVAGIVKLDDLGLYLSRKSSALARSVGSGIVSAAPYLMKTLSVVGTIAMFMVGGG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCH ILTHGLPPVHHLFEDWASYATVVPTFGQILQGVIPALLNVVFGLIAGGVVLLVVSALGAI HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RGRLKA HHHCCC >Mature Secondary Structure AGSSLLTLIDDIASLLDDVSLMTKMAAKKTAGVLGDDLALNAQQVSGVKADRELPVVWS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCHHHHCCCCCCCCCCEEEE VAKGSFINKAILVPLALLISAFAPWAITPLLMVGGAYLCYEGFEKVFHSLTHKKQAGEDN ECCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCC SEALDANEDVAAYEQRKVKGAIRTDFVLSAEIIAITLGTVAGATFSQQVIVLCGIALVMT CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH VGVYGIVAGIVKLDDLGLYLSRKSSALARSVGSGIVSAAPYLMKTLSVVGTIAMFMVGGG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCH ILTHGLPPVHHLFEDWASYATVVPTFGQILQGVIPALLNVVFGLIAGGVVLLVVSALGAI HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RGRLKA HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503; 2527357; 7567469 [H]