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The map label for this gene is ybgL [C]

Identifier: 157369500

GI number: 157369500

Start: 1382776

End: 1383513

Strand: Direct

Name: ybgL [C]

Synonym: Spro_1257

Alternate gene names: 157369500

Gene position: 1382776-1383513 (Clockwise)

Preceding gene: 157369499

Following gene: 157369501

Centisome position: 25.38

GC content: 62.33

Gene sequence:

>738_bases
ATGATCGTTGATTTAAATGCCGATCTCGGCGAGGGCTGCGCCAACGATCAGGCGCTGCTGCAACTGGTCAGCTCGGCCAA
TATTGCCTGCGGTTTCCACGCCGGGGATGCGCAAACTATGCGGCAATCGGTGCGTTGGGCACTGCAGTACGGCGTAGCTA
TTGGTGCGCACCCGAGTTTTCCCGATCGCGAGAACTTTGGCCGTACCCGTATGCAGCTACCAGCGGAAACGGTCTATGCC
CAGGTGGTATACCAACTGGGTGCATTGGCCGCGATTGCCCGTGCCGAAGGCGGGGTGATGGTCCACGTCAAGCCGCACGG
CATGCTGTACAACCAGGCGGCTGTGGAGCCGGAATTGGCGCAGGCTATCGCCCGGGCGGTTAAAGCGGTCGATCCAACGC
TGCGGCTGGTGGGGCTGGCGGGCAGTGAGCTGATCCGCGCCGGTGAAGAGCAAGGATTGGTAACGCGGCAGGAAGTGTTT
GCCGATCGCGGCTACCAGGCCGACGGCACATTGGTACCACGTGGTCAGCCGGGGGCGCTGATTACCAGCGACGAACTGGC
ACTGGCGCAAACGCTGGAAATGGTGCGTCATCATCGGGTTCGTACCCTGAGCGGCACCTGGGCCGCCGTTCAGGCCGAAA
CCGTCTGCCTGCACGGCGACGGTGAACATGCGCTGGAATATGCGCGCACGCTGCGCGAACGTTTTGCCGTGGAAGGCATC
AGCGTCAGCGCTCAGTAA

Upstream 100 bases:

>100_bases
CTGGGCGAGGCCATCCACTTTGTTCCCTGTACTTTGGCCGAGGCGCAACGCGCCAGGGTCGAGCAGGAGCACTTTATCCA
ACAGATTGCCTGGGGGTTAG

Downstream 100 bases:

>100_bases
GGCAGTACATACACAACACACAACACAACAAAAACTATTAGAAATTACCGAGGGAATACTATGGAACAGGCCGTTAACTT
ATGGCCACTGATTGGCATCG

Product: LamB/YcsF family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MIVDLNADLGEGCANDQALLQLVSSANIACGFHAGDAQTMRQSVRWALQYGVAIGAHPSFPDRENFGRTRMQLPAETVYA
QVVYQLGALAAIARAEGGVMVHVKPHGMLYNQAAVEPELAQAIARAVKAVDPTLRLVGLAGSELIRAGEEQGLVTRQEVF
ADRGYQADGTLVPRGQPGALITSDELALAQTLEMVRHHRVRTLSGTWAAVQAETVCLHGDGEHALEYARTLRERFAVEGI
SVSAQ

Sequences:

>Translated_245_residues
MIVDLNADLGEGCANDQALLQLVSSANIACGFHAGDAQTMRQSVRWALQYGVAIGAHPSFPDRENFGRTRMQLPAETVYA
QVVYQLGALAAIARAEGGVMVHVKPHGMLYNQAAVEPELAQAIARAVKAVDPTLRLVGLAGSELIRAGEEQGLVTRQEVF
ADRGYQADGTLVPRGQPGALITSDELALAQTLEMVRHHRVRTLSGTWAAVQAETVCLHGDGEHALEYARTLRERFAVEGI
SVSAQ
>Mature_245_residues
MIVDLNADLGEGCANDQALLQLVSSANIACGFHAGDAQTMRQSVRWALQYGVAIGAHPSFPDRENFGRTRMQLPAETVYA
QVVYQLGALAAIARAEGGVMVHVKPHGMLYNQAAVEPELAQAIARAVKAVDPTLRLVGLAGSELIRAGEEQGLVTRQEVF
ADRGYQADGTLVPRGQPGALITSDELALAQTLEMVRHHRVRTLSGTWAAVQAETVCLHGDGEHALEYARTLRERFAVEGI
SVSAQ

Specific function: Unknown

COG id: COG1540

COG function: function code R; Uncharacterized proteins, homologs of lactam utilization protein B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0271 (lamB) family

Homologues:

Organism=Escherichia coli, GI1786931, Length=244, Percent_Identity=74.5901639344262, Blast_Score=371, Evalue=1e-104,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1257_SERP5 (A8GB71)

Other databases:

- EMBL:   CP000826
- RefSeq:   YP_001477489.1
- ProteinModelPortal:   A8GB71
- SMR:   A8GB71
- STRING:   A8GB71
- GeneID:   5604473
- GenomeReviews:   CP000826_GR
- KEGG:   spe:Spro_1257
- eggNOG:   COG1540
- HOGENOM:   HBG482818
- OMA:   QTICLHG
- ProtClustDB:   PRK05406
- BioCyc:   SPRO399741:SPRO_1257-MONOMER
- HAMAP:   MF_00691
- InterPro:   IPR011330
- InterPro:   IPR005501

Pfam domain/function: PF03746 LamB_YcsF; SSF88713 Glyco_hydro/deAcase_b/a-brl

EC number: NA

Molecular weight: Translated: 26263; Mature: 26263

Theoretical pI: Translated: 5.83; Mature: 5.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVDLNADLGEGCANDQALLQLVSSANIACGFHAGDAQTMRQSVRWALQYGVAIGAHPSF
CEEECCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHCEEECCCCCC
PDRENFGRTRMQLPAETVYAQVVYQLGALAAIARAEGGVMVHVKPHGMLYNQAAVEPELA
CCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEECHHCCCHHHH
QAIARAVKAVDPTLRLVGLAGSELIRAGEEQGLVTRQEVFADRGYQADGTLVPRGQPGAL
HHHHHHHHHCCCHHEEEECCCHHHHHCCCCCCCHHHHHHHHCCCCCCCCEECCCCCCCCE
ITSDELALAQTLEMVRHHRVRTLSGTWAAVQAETVCLHGDGEHALEYARTLRERFAVEGI
EECCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHCCE
SVSAQ
EEECC
>Mature Secondary Structure
MIVDLNADLGEGCANDQALLQLVSSANIACGFHAGDAQTMRQSVRWALQYGVAIGAHPSF
CEEECCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHCEEECCCCCC
PDRENFGRTRMQLPAETVYAQVVYQLGALAAIARAEGGVMVHVKPHGMLYNQAAVEPELA
CCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEECHHCCCHHHH
QAIARAVKAVDPTLRLVGLAGSELIRAGEEQGLVTRQEVFADRGYQADGTLVPRGQPGAL
HHHHHHHHHCCCHHEEEECCCHHHHHCCCCCCCHHHHHHHHCCCCCCCCEECCCCCCCCE
ITSDELALAQTLEMVRHHRVRTLSGTWAAVQAETVCLHGDGEHALEYARTLRERFAVEGI
EECCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHCCE
SVSAQ
EEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA