| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is gltJ [H]
Identifier: 157369456
GI number: 157369456
Start: 1329494
End: 1330234
Strand: Reverse
Name: gltJ [H]
Synonym: Spro_1213
Alternate gene names: 157369456
Gene position: 1330234-1329494 (Counterclockwise)
Preceding gene: 157369457
Following gene: 157369455
Centisome position: 24.41
GC content: 55.33
Gene sequence:
>741_bases ATGTCAATAGATTGGAACTGGGGTATCTTCCTGCAGCAGGCCCCGTTTGGGAATACCACTTACCTCGGCTGGATTTGGTC CGGCTTTCAGGTCACGGTAGCCCTCTCCGTCTGTGCATGGATTATCGCTTTCTTTGTCGGTTCGCTATTCGGTATTTTGC GTACCGTACCCAACCGCTTTCTTTCCACCCTCGGTACCTGTTACGTCGAACTGTTCCGTAACGTGCCGCTGATCGTGCAA TTCTTTACCTGGTATCTGGTGATCCCGGAACTGCTGCCGGCCAATATGGGCATGTGGTTCAAAACCGAACTCGATCCTAA CGTGCAGTTCTTCGTTTCCTCGATGCTGTGCCTGGGGCTGTTTACCGCCGCCCGCGTATGCGAACAGGTACGCGCTGCCA TTCAGTCACTGCCACGCGGTCAGAGAGCCGCCGGACTGGCCATGGGCCTGACGCTGCCGCAAACCTATCGCTACGTGCTG TTGCCGAACGCCTATCGGGTGATTGTGCCGCCGATGACCTCGGAAATGCTTAACCTGGTTAAAAACTCCGCCATTGCTTC CACCATCGGGCTGGTCGACATGGCTGCGCAGGCCGGCAAACTGCTGGATTACTCCGCGCATGCCTATGAATCCTTTACCG CGATTACGCTGGCCTACATCGCCATCAACGCCGTGATCATGCTGTTTATGCGACTGGTAGAGCGAAAAGTGCAGTTGCCC GGCAATCTGGGGAGTAAATAA
Upstream 100 bases:
>100_bases CCGATGCCGCACAGACAGGTCAGCCCAACTGGCCGCGGTACTTTCGGCGTGAATAGTCATCAATCTTTAGGCGCTCTGCG CCCGCTTAACGGAGTTTGTT
Downstream 100 bases:
>100_bases TGTACGAATTTGACTGGGCATCAATTGTCCCAAGCTTCCCTTACCTGCTGCAAGGTCTGTTGATCACGCTGAAGATCACC GTGACCGCTATCGTCTTCGG
Product: polar amino acid ABC transporter inner membrane subunit
Products: ADP; phosphate; L-glutamate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 246; Mature: 245
Protein sequence:
>246_residues MSIDWNWGIFLQQAPFGNTTYLGWIWSGFQVTVALSVCAWIIAFFVGSLFGILRTVPNRFLSTLGTCYVELFRNVPLIVQ FFTWYLVIPELLPANMGMWFKTELDPNVQFFVSSMLCLGLFTAARVCEQVRAAIQSLPRGQRAAGLAMGLTLPQTYRYVL LPNAYRVIVPPMTSEMLNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAYESFTAITLAYIAINAVIMLFMRLVERKVQLP GNLGSK
Sequences:
>Translated_246_residues MSIDWNWGIFLQQAPFGNTTYLGWIWSGFQVTVALSVCAWIIAFFVGSLFGILRTVPNRFLSTLGTCYVELFRNVPLIVQ FFTWYLVIPELLPANMGMWFKTELDPNVQFFVSSMLCLGLFTAARVCEQVRAAIQSLPRGQRAAGLAMGLTLPQTYRYVL LPNAYRVIVPPMTSEMLNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAYESFTAITLAYIAINAVIMLFMRLVERKVQLP GNLGSK >Mature_245_residues SIDWNWGIFLQQAPFGNTTYLGWIWSGFQVTVALSVCAWIIAFFVGSLFGILRTVPNRFLSTLGTCYVELFRNVPLIVQF FTWYLVIPELLPANMGMWFKTELDPNVQFFVSSMLCLGLFTAARVCEQVRAAIQSLPRGQRAAGLAMGLTLPQTYRYVLL PNAYRVIVPPMTSEMLNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAYESFTAITLAYIAINAVIMLFMRLVERKVQLPG NLGSK
Specific function: Part of the binding-protein-dependent transport system for aspartate/glutamate; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0765
COG function: function code E; ABC-type amino acid transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786874, Length=246, Percent_Identity=89.4308943089431, Blast_Score=456, Evalue=1e-130, Organism=Escherichia coli, GI48994930, Length=125, Percent_Identity=40, Blast_Score=98, Evalue=5e-22, Organism=Escherichia coli, GI1788226, Length=198, Percent_Identity=31.8181818181818, Blast_Score=98, Evalue=6e-22, Organism=Escherichia coli, GI1786873, Length=215, Percent_Identity=25.5813953488372, Blast_Score=95, Evalue=5e-21, Organism=Escherichia coli, GI1787030, Length=214, Percent_Identity=26.6355140186916, Blast_Score=93, Evalue=2e-20, Organism=Escherichia coli, GI1788645, Length=221, Percent_Identity=26.2443438914027, Blast_Score=72, Evalue=2e-14, Organism=Escherichia coli, GI1787086, Length=219, Percent_Identity=27.3972602739726, Blast_Score=72, Evalue=3e-14, Organism=Escherichia coli, GI87082239, Length=169, Percent_Identity=26.6272189349112, Blast_Score=67, Evalue=8e-13, Organism=Escherichia coli, GI1788646, Length=184, Percent_Identity=27.1739130434783, Blast_Score=62, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010065 - InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 27428; Mature: 27297
Theoretical pI: Translated: 9.13; Mature: 9.13
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIDWNWGIFLQQAPFGNTTYLGWIWSGFQVTVALSVCAWIIAFFVGSLFGILRTVPNRF CCCCCCCCEEEEECCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSTLGTCYVELFRNVPLIVQFFTWYLVIPELLPANMGMWFKTELDPNVQFFVSSMLCLGL HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHH FTAARVCEQVRAAIQSLPRGQRAAGLAMGLTLPQTYRYVLLPNAYRVIVPPMTSEMLNLV HHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCHHEEEEECCCCCEEEECCHHHHHHHHH KNSAIASTIGLVDMAAQAGKLLDYSAHAYESFTAITLAYIAINAVIMLFMRLVERKVQLP HHHHHHHHHHHHHHHHHHCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GNLGSK CCCCCC >Mature Secondary Structure SIDWNWGIFLQQAPFGNTTYLGWIWSGFQVTVALSVCAWIIAFFVGSLFGILRTVPNRF CCCCCCCEEEEECCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSTLGTCYVELFRNVPLIVQFFTWYLVIPELLPANMGMWFKTELDPNVQFFVSSMLCLGL HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHH FTAARVCEQVRAAIQSLPRGQRAAGLAMGLTLPQTYRYVLLPNAYRVIVPPMTSEMLNLV HHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCHHEEEEECCCCCEEEECCHHHHHHHHH KNSAIASTIGLVDMAAQAGKLLDYSAHAYESFTAITLAYIAINAVIMLFMRLVERKVQLP HHHHHHHHHHHHHHHHHHCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GNLGSK CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-glutamate [Periplasm]; H2O [C]
Specific reaction: ATP + L-glutamate [Periplasm] + H2O = ADP + phosphate + L-glutamate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]