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The map label for this gene is yecS [H]

Identifier: 157369428

GI number: 157369428

Start: 1302624

End: 1303511

Strand: Reverse

Name: yecS [H]

Synonym: Spro_1185

Alternate gene names: 157369428

Gene position: 1303511-1302624 (Counterclockwise)

Preceding gene: 157369429

Following gene: 157369427

Centisome position: 23.92

GC content: 58.0

Gene sequence:

>888_bases
ATGTCCAAACAAGAAGTCTTAAAAGTGGTTCCCGCACGTTACCCGCTGCGGCTGGCAGGTGCGTTGTTCTCGGTGTTTAT
TCTGGCGGCGATCCTCCAGTCTGTGGCAACCAACGAACGCTGGGAATGGGGGGTATTCGCCGAATGGTTCTTTGCCCCGG
CGGTGCTGTCGGGTCTGGGAAAAACGCTGCTGCTGACGCTGCTCGGCACGCTGTTCAGTATCATCTTCGGTACGCTGCTG
GCCCTGGCGCGGTTATCGCGCTCCTACCTGTTGGCTTCGCTGGCGTGGGGTTATATCTGGCTGTTCCGCTCGCTGCCGCT
GATCCTGGTGCTGATCGTTCTGTATAACTTCTCTTATCTGTACGACTCCATCTCACTGGGCATCCCCTTTACCTCGCTGG
TGTTCGCCAGCTATCCGACCATCGATATCCTCAGCCAGTTCTCGGTGGCGGTGCTGGGGCTGACGCTGGTGCAGTCGGCC
TATACCGCAGAAATCATCCGCGGCGGCATTATCGGGGTCGAGTACGGCCAGCATGAAGCGGCTGCGGCCCTGGGTCTGCC
GGGCTATCGCCGCACTTTCCGCATTATTTTGCCCCAGGCGCTGCGTTCGATTATTCCAACCGGCTTCAATGAAATTATCA
GCCTGGCGAAGGGCACTTCGATTGTCTACGTGCTGGCGCTGCCGGAGCTGTTTTATACCATTCAGGTGATCTACAACCGC
ACCCAGCAGGTGATACCGCTGCTGATGGTCGCCACCGTCTGGTACCTGTTCATCACCACCGCACTGTCGGTCATTCAGTA
TTACATCGAGCGCTATTTCGCCCGTGGCGCAGTGCGCGAACTGCCGCCAACGCCATGGCAGAAACTGGCCGGCTGGTTAA
AACGTTAG

Upstream 100 bases:

>100_bases
CCTGATAACAGCGGACGCATACTGTTGCGCACCGGAAAGGAAGATTGCCTAGGGGACATTCCCCCTTATTCACCCTTTTA
TCTGTTTCAGGAGAGTAGTG

Downstream 100 bases:

>100_bases
GAGGATCCCATGTCCGAAGCCATTGATTATTATGCCCTGCGCGAAGCGGCGGTACACAGCATCGTGCCAGTACCGGCGCG
CGGCCTGATTGAAATCAGCA

Product: polar amino acid ABC transporter inner membrane subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 295; Mature: 294

Protein sequence:

>295_residues
MSKQEVLKVVPARYPLRLAGALFSVFILAAILQSVATNERWEWGVFAEWFFAPAVLSGLGKTLLLTLLGTLFSIIFGTLL
ALARLSRSYLLASLAWGYIWLFRSLPLILVLIVLYNFSYLYDSISLGIPFTSLVFASYPTIDILSQFSVAVLGLTLVQSA
YTAEIIRGGIIGVEYGQHEAAAALGLPGYRRTFRIILPQALRSIIPTGFNEIISLAKGTSIVYVLALPELFYTIQVIYNR
TQQVIPLLMVATVWYLFITTALSVIQYYIERYFARGAVRELPPTPWQKLAGWLKR

Sequences:

>Translated_295_residues
MSKQEVLKVVPARYPLRLAGALFSVFILAAILQSVATNERWEWGVFAEWFFAPAVLSGLGKTLLLTLLGTLFSIIFGTLL
ALARLSRSYLLASLAWGYIWLFRSLPLILVLIVLYNFSYLYDSISLGIPFTSLVFASYPTIDILSQFSVAVLGLTLVQSA
YTAEIIRGGIIGVEYGQHEAAAALGLPGYRRTFRIILPQALRSIIPTGFNEIISLAKGTSIVYVLALPELFYTIQVIYNR
TQQVIPLLMVATVWYLFITTALSVIQYYIERYFARGAVRELPPTPWQKLAGWLKR
>Mature_294_residues
SKQEVLKVVPARYPLRLAGALFSVFILAAILQSVATNERWEWGVFAEWFFAPAVLSGLGKTLLLTLLGTLFSIIFGTLLA
LARLSRSYLLASLAWGYIWLFRSLPLILVLIVLYNFSYLYDSISLGIPFTSLVFASYPTIDILSQFSVAVLGLTLVQSAY
TAEIIRGGIIGVEYGQHEAAAALGLPGYRRTFRIILPQALRSIIPTGFNEIISLAKGTSIVYVLALPELFYTIQVIYNRT
QQVIPLLMVATVWYLFITTALSVIQYYIERYFARGAVRELPPTPWQKLAGWLKR

Specific function: Probably part of the binding-protein-dependent transport system yecCS for an amino acid; probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788226, Length=223, Percent_Identity=35.4260089686099, Blast_Score=115, Evalue=3e-27,
Organism=Escherichia coli, GI1786873, Length=220, Percent_Identity=34.5454545454545, Blast_Score=106, Evalue=2e-24,
Organism=Escherichia coli, GI87082239, Length=179, Percent_Identity=36.8715083798883, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1788645, Length=206, Percent_Identity=31.0679611650485, Blast_Score=83, Evalue=3e-17,
Organism=Escherichia coli, GI48994930, Length=133, Percent_Identity=33.8345864661654, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1787087, Length=190, Percent_Identity=30.5263157894737, Blast_Score=75, Evalue=7e-15,
Organism=Escherichia coli, GI1787030, Length=232, Percent_Identity=28.8793103448276, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1787086, Length=223, Percent_Identity=26.457399103139, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1788646, Length=230, Percent_Identity=26.0869565217391, Blast_Score=65, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33016; Mature: 32884

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
0.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKQEVLKVVPARYPLRLAGALFSVFILAAILQSVATNERWEWGVFAEWFFAPAVLSGLG
CCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
KTLLLTLLGTLFSIIFGTLLALARLSRSYLLASLAWGYIWLFRSLPLILVLIVLYNFSYL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YDSISLGIPFTSLVFASYPTIDILSQFSVAVLGLTLVQSAYTAEIIRGGIIGVEYGQHEA
HHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHH
AAALGLPGYRRTFRIILPQALRSIIPTGFNEIISLAKGTSIVYVLALPELFYTIQVIYNR
HHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHH
TQQVIPLLMVATVWYLFITTALSVIQYYIERYFARGAVRELPPTPWQKLAGWLKR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCHHHHHHHHCC
>Mature Secondary Structure 
SKQEVLKVVPARYPLRLAGALFSVFILAAILQSVATNERWEWGVFAEWFFAPAVLSGLG
CHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
KTLLLTLLGTLFSIIFGTLLALARLSRSYLLASLAWGYIWLFRSLPLILVLIVLYNFSYL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YDSISLGIPFTSLVFASYPTIDILSQFSVAVLGLTLVQSAYTAEIIRGGIIGVEYGQHEA
HHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHH
AAALGLPGYRRTFRIILPQALRSIIPTGFNEIISLAKGTSIVYVLALPELFYTIQVIYNR
HHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHH
TQQVIPLLMVATVWYLFITTALSVIQYYIERYFARGAVRELPPTPWQKLAGWLKR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]