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The map label for this gene is ybaJ [H]

Identifier: 157369362

GI number: 157369362

Start: 1233191

End: 1233559

Strand: Reverse

Name: ybaJ [H]

Synonym: Spro_1119

Alternate gene names: 157369362

Gene position: 1233559-1233191 (Counterclockwise)

Preceding gene: 157369363

Following gene: 157369361

Centisome position: 22.64

GC content: 43.63

Gene sequence:

>369_bases
ATGGATGAGTATTCGCCTAAAAGGCACGATATTGCTCAGCTGAAATTCTTGTGTGAAAACCTGTATGATGAAGGTATCGC
CACGCTGGGCGACAGCCATCATGGCTGGGTGAACGATCCGACGTCTTCCGTCAACCTCCAGCTTAATGAGTTGATCGAAC
ATATTGCTTCGTTTGTGATGAGTTATAAAATTAAATACATGGACGAAAGTGATTTATCGGAACTTGTCGAAGAGTATCTC
GATGATACCTACACGCTGTTCAGCAGTTACGGTATAAATGATTCCGATCTGCGTCGTTGGCAGAAAACCAAGGCGCGATT
ATTCAGAATGTTCTCAGGAGAGGACATCTGTACGACAATGAAAACTTAG

Upstream 100 bases:

>100_bases
TATTTTATCATCATCTTTAAGCTACCTCTGTCCATGATGTAAATCAGCTTACTCACAGAGTGTTATCAACACCGAAATTA
AGACTTACGGAGGGGATGAT

Downstream 100 bases:

>100_bases
GGGATAATTATCCCCAAACTATTCTATTCGACGGTTTATAACACCAAAGGTTATCATGACTAAAATTGATTATCTGATGC
GTTTACGTAAATGCACCACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 122; Mature: 122

Protein sequence:

>122_residues
MDEYSPKRHDIAQLKFLCENLYDEGIATLGDSHHGWVNDPTSSVNLQLNELIEHIASFVMSYKIKYMDESDLSELVEEYL
DDTYTLFSSYGINDSDLRRWQKTKARLFRMFSGEDICTTMKT

Sequences:

>Translated_122_residues
MDEYSPKRHDIAQLKFLCENLYDEGIATLGDSHHGWVNDPTSSVNLQLNELIEHIASFVMSYKIKYMDESDLSELVEEYL
DDTYTLFSSYGINDSDLRRWQKTKARLFRMFSGEDICTTMKT
>Mature_122_residues
MDEYSPKRHDIAQLKFLCENLYDEGIATLGDSHHGWVNDPTSSVNLQLNELIEHIASFVMSYKIKYMDESDLSELVEEYL
DDTYTLFSSYGINDSDLRRWQKTKARLFRMFSGEDICTTMKT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786666, Length=111, Percent_Identity=68.4684684684685, Blast_Score=168, Evalue=1e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019693 [H]

Pfam domain/function: PF10757 YbaJ [H]

EC number: NA

Molecular weight: Translated: 14262; Mature: 14262

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDEYSPKRHDIAQLKFLCENLYDEGIATLGDSHHGWVNDPTSSVNLQLNELIEHIASFVM
CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHH
SYKIKYMDESDLSELVEEYLDDTYTLFSSYGINDSDLRRWQKTKARLFRMFSGEDICTTM
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHCC
KT
CC
>Mature Secondary Structure
MDEYSPKRHDIAQLKFLCENLYDEGIATLGDSHHGWVNDPTSSVNLQLNELIEHIASFVM
CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHH
SYKIKYMDESDLSELVEEYLDDTYTLFSSYGINDSDLRRWQKTKARLFRMFSGEDICTTM
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHCC
KT
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]