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The map label for this gene is fimA [H]

Identifier: 157369294

GI number: 157369294

Start: 1156692

End: 1157216

Strand: Reverse

Name: fimA [H]

Synonym: Spro_1051

Alternate gene names: 157369294

Gene position: 1157216-1156692 (Counterclockwise)

Preceding gene: 157369295

Following gene: 157369293

Centisome position: 21.24

GC content: 65.52

Gene sequence:

>525_bases
ATGACCCTTTTCAAGCCCCTGATGGCGGCCGGGCTGGCGTTGCTGCTGCCTGCCGCCGCCCTGGCCGACAGCGCCAGCAT
CAACGTGACCGGGCGGATACTCTCTTCCGCCTGCCAGCCGGAGGTCAATCCGCTGAACGTGCCGCTCGGCACCCTGTCGC
AAAGCGCCCTGGCAGGCAAGGGCAGCACCGCCTCGGCCACCCGCTTTACCCTGCGGCTGAAAAACTGCCCGGCGGAAATC
AGCCAGGTGCAGGTGCGGTTTGACGGCAGCGCCGTCAGCGGTGACACCAGCGTACTGGCGCTGACGGCGGGAACCGGCGT
TGCCGGCGGCGTCGGCATTCAATTGCAGGATGCCAATGCCGCCGTGCTGCGGTTTGGGCAACCCTCGGCGGCCATGGCGA
TCCAGGGCGGTGCCGGCAGTGTTTCATCACTGGCCTTTACCGCCCGTTATATCGCCATCAGCGACACCGTAAGCGCCGGC
AGCGCCAATGCCAGTGCCACCTTCACCATTTTGTACAGCAATTAA

Upstream 100 bases:

>100_bases
TCAGCGCGCGCTATTACCAGACCCAAACCACCATCGGCGCCGGGCTGGCCAACAGCAGTGCCACCCTGAATATCACCTAC
CAGTAAACCGGGAGAAGCGC

Downstream 100 bases:

>100_bases
CGCAGTCATTGCCTGCAGGAGACGCCCATGCCGTTAACCGATATCGTTCCAAGGTCCCCCGTATTGTTGCCCCCGCATCT
GGCAGAGAAATTAACGCCGA

Product: fimbrial protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 174; Mature: 173

Protein sequence:

>174_residues
MTLFKPLMAAGLALLLPAAALADSASINVTGRILSSACQPEVNPLNVPLGTLSQSALAGKGSTASATRFTLRLKNCPAEI
SQVQVRFDGSAVSGDTSVLALTAGTGVAGGVGIQLQDANAAVLRFGQPSAAMAIQGGAGSVSSLAFTARYIAISDTVSAG
SANASATFTILYSN

Sequences:

>Translated_174_residues
MTLFKPLMAAGLALLLPAAALADSASINVTGRILSSACQPEVNPLNVPLGTLSQSALAGKGSTASATRFTLRLKNCPAEI
SQVQVRFDGSAVSGDTSVLALTAGTGVAGGVGIQLQDANAAVLRFGQPSAAMAIQGGAGSVSSLAFTARYIAISDTVSAG
SANASATFTILYSN
>Mature_173_residues
TLFKPLMAAGLALLLPAAALADSASINVTGRILSSACQPEVNPLNVPLGTLSQSALAGKGSTASATRFTLRLKNCPAEIS
QVQVRFDGSAVSGDTSVLALTAGTGVAGGVGIQLQDANAAVLRFGQPSAAMAIQGGAGSVSSLAFTARYIAISDTVSAGS
ANASATFTILYSN

Specific function: Fimbriae (also called pili), polar filaments radiating from the surface of the bacterium to a length of 0.5-1.5 micrometers and numbering 100-300 per cell, enable bacteria to colonize the epithelium of specific host organs [H]

COG id: COG3539

COG function: function code NU; P pilus assembly protein, pilin FimA

Gene ontology:

Cell location: Fimbrium [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fimbrial protein family [H]

Homologues:

Organism=Escherichia coli, GI1787781, Length=173, Percent_Identity=29.4797687861272, Blast_Score=64, Evalue=4e-12,
Organism=Escherichia coli, GI1790773, Length=173, Percent_Identity=31.7919075144509, Blast_Score=64, Evalue=6e-12,
Organism=Escherichia coli, GI87082421, Length=172, Percent_Identity=29.6511627906977, Blast_Score=63, Evalue=1e-11,
Organism=Escherichia coli, GI87081805, Length=164, Percent_Identity=25.609756097561, Blast_Score=62, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008966
- InterPro:   IPR000259
- InterPro:   IPR014779 [H]

Pfam domain/function: PF00419 Fimbrial [H]

EC number: NA

Molecular weight: Translated: 17232; Mature: 17101

Theoretical pI: Translated: 8.76; Mature: 8.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLFKPLMAAGLALLLPAAALADSASINVTGRILSSACQPEVNPLNVPLGTLSQSALAGK
CCCHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHCCCCCCEEECCCCCCCCHHHCCC
GSTASATRFTLRLKNCPAEISQVQVRFDGSAVSGDTSVLALTAGTGVAGGVGIQLQDANA
CCCCCEEEEEEEECCCCCCCEEEEEEECCCEECCCCEEEEEEECCCCCCCEEEEEECCCE
AVLRFGQPSAAMAIQGGAGSVSSLAFTARYIAISDTVSAGSANASATFTILYSN
EEEEECCCCCEEEEECCCCCHHHEEEEEEEEEEECCCCCCCCCCCEEEEEEEEC
>Mature Secondary Structure 
TLFKPLMAAGLALLLPAAALADSASINVTGRILSSACQPEVNPLNVPLGTLSQSALAGK
CCHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHCCCCCCEEECCCCCCCCHHHCCC
GSTASATRFTLRLKNCPAEISQVQVRFDGSAVSGDTSVLALTAGTGVAGGVGIQLQDANA
CCCCCEEEEEEEECCCCCCCEEEEEEECCCEECCCCEEEEEEECCCCCCCEEEEEECCCE
AVLRFGQPSAAMAIQGGAGSVSSLAFTARYIAISDTVSAGSANASATFTILYSN
EEEEECCCCCEEEEECCCCCHHHEEEEEEEEEEECCCCCCCCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1982455 [H]