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The map label for this gene is yafE [H]

Identifier: 157369251

GI number: 157369251

Start: 1108749

End: 1109519

Strand: Direct

Name: yafE [H]

Synonym: Spro_1008

Alternate gene names: 157369251

Gene position: 1108749-1109519 (Clockwise)

Preceding gene: 157369247

Following gene: 157369253

Centisome position: 20.35

GC content: 55.25

Gene sequence:

>771_bases
ATGAGCATCAGCAATAGCCATAAAAATGCGGTCGACCGCCAGTTTGGTGAGCAGGCCAGCGCCTACCTGACCAGTGCAGT
GCATGCACAGGGAAAGGATTTACAGCGACTGGCACGACTGCTGGAACCCCATGCCAACGCCAAATTACTGGATCTGGGTT
GTGGCGCAGGGCATGCCAGCTTTACTGCTGCGGCTAAAGTGGCGCAGGTGGTGGCCTATGATTTATCGGCGCAGATGTTG
GATGTGGTAAGCCAGGCGGCGCAGGATAAAGGTTTCAACAACATTCAGGTGCAGCAGGGCGTGGCAGAATCGCTGCCGTT
TGACGATGCCAGCTTTGATGTGGTGATCAGCCGTTACTCGGCGCACCACTGGCATGACGTCGGTCAGGCGCTGCGCGAAG
TTCGCCGGGTATTGAAACCGGGCGGCAGGGCCATCTTTATGGATGTGGTTGCACCGGGGCATCCGCTGTTGGATATCTAT
CTGCAAACCGTAGAGGTACTGCGTGATACTTCACATGTGCGCAATTACGCACCAGGTGAATGGCTGAGTCTGCTGACAGA
GTCTGGATTGTTGGTTCGGGAGGTGACGTCGGATCGGCTTTATCTGGAGTTCAGCAGTTGGGTGGAGCGCATGCGTACGC
CAGAGCATTTCGTCATTGCGATTCGCGCGTTGCAACAGGGGCTCTCTGAAGATGTGCTGCAGCATTTTGCCATCGAGCCG
GACGGTTCATTCACCAGCGACATTATGATGTTTGAAGTCGTCAGAGGTTAA

Upstream 100 bases:

>100_bases
TACTAGGATAACTGCTTATATTGTACCCGTATAATAAGCCAATTATAGTCATTGAAAGCCATCCGGCACAGGCGCAAGCC
ATACAATAAAGGGAGCACCT

Downstream 100 bases:

>100_bases
ATAATTCAGGGCAGCCGATATACCCTTCATTTTCCCGATGGCAAGCGGAAACACGCGGGATATAGCGGCTGCCCTGACAG
AATACTGCCAGGAAAGAAAT

Product: type 11 methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 255

Protein sequence:

>256_residues
MSISNSHKNAVDRQFGEQASAYLTSAVHAQGKDLQRLARLLEPHANAKLLDLGCGAGHASFTAAAKVAQVVAYDLSAQML
DVVSQAAQDKGFNNIQVQQGVAESLPFDDASFDVVISRYSAHHWHDVGQALREVRRVLKPGGRAIFMDVVAPGHPLLDIY
LQTVEVLRDTSHVRNYAPGEWLSLLTESGLLVREVTSDRLYLEFSSWVERMRTPEHFVIAIRALQQGLSEDVLQHFAIEP
DGSFTSDIMMFEVVRG

Sequences:

>Translated_256_residues
MSISNSHKNAVDRQFGEQASAYLTSAVHAQGKDLQRLARLLEPHANAKLLDLGCGAGHASFTAAAKVAQVVAYDLSAQML
DVVSQAAQDKGFNNIQVQQGVAESLPFDDASFDVVISRYSAHHWHDVGQALREVRRVLKPGGRAIFMDVVAPGHPLLDIY
LQTVEVLRDTSHVRNYAPGEWLSLLTESGLLVREVTSDRLYLEFSSWVERMRTPEHFVIAIRALQQGLSEDVLQHFAIEP
DGSFTSDIMMFEVVRG
>Mature_255_residues
SISNSHKNAVDRQFGEQASAYLTSAVHAQGKDLQRLARLLEPHANAKLLDLGCGAGHASFTAAAKVAQVVAYDLSAQMLD
VVSQAAQDKGFNNIQVQQGVAESLPFDDASFDVVISRYSAHHWHDVGQALREVRRVLKPGGRAIFMDVVAPGHPLLDIYL
QTVEVLRDTSHVRNYAPGEWLSLLTESGLLVREVTSDRLYLEFSSWVERMRTPEHFVIAIRALQQGLSEDVLQHFAIEPD
GSFTSDIMMFEVVRG

Specific function: Unknown

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily [H]

Homologues:

Organism=Escherichia coli, GI1786404, Length=200, Percent_Identity=64, Blast_Score=267, Evalue=4e-73,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013216 [H]

Pfam domain/function: PF08241 Methyltransf_11 [H]

EC number: NA

Molecular weight: Translated: 28309; Mature: 28178

Theoretical pI: Translated: 5.94; Mature: 5.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSISNSHKNAVDRQFGEQASAYLTSAVHAQGKDLQRLARLLEPHANAKLLDLGCGAGHAS
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCEEEEECCCCCCHH
FTAAAKVAQVVAYDLSAQMLDVVSQAAQDKGFNNIQVQQGVAESLPFDDASFDVVISRYS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHCCCCCCCHHHHHHHHH
AHHWHDVGQALREVRRVLKPGGRAIFMDVVAPGHPLLDIYLQTVEVLRDTSHVRNYAPGE
HHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCHH
WLSLLTESGLLVREVTSDRLYLEFSSWVERMRTPEHFVIAIRALQQGLSEDVLQHFAIEP
HHHHHHHCCCEEEEECCCEEEEEHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHCCCC
DGSFTSDIMMFEVVRG
CCCCHHHHHHHHHHCC
>Mature Secondary Structure 
SISNSHKNAVDRQFGEQASAYLTSAVHAQGKDLQRLARLLEPHANAKLLDLGCGAGHAS
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCEEEEECCCCCCHH
FTAAAKVAQVVAYDLSAQMLDVVSQAAQDKGFNNIQVQQGVAESLPFDDASFDVVISRYS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHCCCCCCCHHHHHHHHH
AHHWHDVGQALREVRRVLKPGGRAIFMDVVAPGHPLLDIYLQTVEVLRDTSHVRNYAPGE
HHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCHH
WLSLLTESGLLVREVTSDRLYLEFSSWVERMRTPEHFVIAIRALQQGLSEDVLQHFAIEP
HHHHHHHCCCEEEEECCCEEEEEHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHCCCC
DGSFTSDIMMFEVVRG
CCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1663890; 9278503 [H]