| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is 157369138
Identifier: 157369138
GI number: 157369138
Start: 992224
End: 993597
Strand: Direct
Name: 157369138
Synonym: Spro_0893
Alternate gene names: NA
Gene position: 992224-993597 (Clockwise)
Preceding gene: 157369137
Following gene: 157369139
Centisome position: 18.21
GC content: 56.04
Gene sequence:
>1374_bases ATGGATAGTCAGGAAAAGGGTCAGGCGCGTCTGAGTTTACCGATGAGCCAATGGCTCAGCGTGGAGCGTGATGATGGGGT GATTGTTGCCTGGCGTGGCGCTCAGGCATTTTGTCTCGGTCAATTTCGCCGGGATGTCTCCGCATTGGTTGCACAGCTGG CAGGCAGGGAAGAGCAGCGTTGGGCGCTGTGTTTTGATGATAGCTATCGTTTCGCCATTGCGCTGTTGGCCTCTTTGTAT GCCAACAGGGTGCCGGTAATTTTTGGTCATCAGCGCGAAGCTATCCTCAAAGAGCAGCGGGCAGATTTCGACGCACTGCT AACTGATTTACCCCTCGATCTTGGTGTGCCGGTTTTGCCGGTACCAGAAGGGGGCAGTACGGAGATAGCACTGCCTGCCT GGCCCCAGGATCCTCGTTTTATCCTTTATACCTCCGGCTCGACCGGCCAACCACAGGCCGTGACCAAGTCCATTGCCTGC ATGGATCGTGAAAGCGAACTGTTGGCCGCAAGCTGGAAAGATGTCTTTCAGGGTTGCAGCGTGATCGCGTCGGTCTCTCA TCAGCATATGTATGGCCTGAGCTTTCGCTTGTTTCTGCCACTGGCTTTTGGCCTGCCGTTCGATGCGCAGTTAACGCAGT ATCACGAGCAGTTGATTGCCCGTCACCAGGGGCGACGTTTGGTGTTTGTCAGCAGCCCAGCCTGGCTTAAGCGTTTGGAT AACCGTTTGGCACTGGCAGAGTGCGTTGAGGTATTTTCCGCCGGCGGCCCGCTCTCTTACGCGGAAGCTAACTTGTCGCA GCAGGCATTGGGCGTATTGCCGCTGGAAATATACGGTACAACGGAAACCGGCTCGCTGGCATGGCGCAAGCAAGTTCGAG AAGCCTCCCTGTGGCGGCTGTTTGCCGGAGTGACACTAACGGCAAATCCAGATAACAGCATGAATGTTGCGTCGCCACTG ATACCCGATACCGGTGAGCTCGCACTGAGCGATATTATTCAGCTTGCGCCAGATGGTCGGCAATTCCAGTTAAACGGCCG GACCGACCGCATTATCAAGCTGGAAGAAAAGCGTCTGTCGCTGACCGAAGTTGAGCGCCGGTTGGTTTCCCTGCCGGAGG TCGCCGATGCTGCCGTGCTAACGCAGCAGCAAACAGGTCGCACGGTATTAGTAGCGGCGATAGTGTTGTCACCCTATGGC AAAAGCCAACGACAAAAATTGTCAGAAGGGGAGTTAACCCGCGAACTGCATCAGGCGTTGCGGGGCTGGCTGGAGCCGGT GGCCCTGCCGCGCCGTTGGCGTATTATCGATGCTATCCCTCTGAATCCGCAGGGCAAGCGCGCCTATGCTGAACTACAGG AGCTGTTTTTATGA
Upstream 100 bases:
>100_bases CAATAGCGCTGGCAACCTGTCTGTCCGGGGATATCACACTCTGGACGCTGTATAACGGCGGCATCAGCTACCTGCTGATG GGGGCATTAATGGGTATTGA
Downstream 100 bases:
>100_bases TGCAACCTGAGGTGCTGCAACAGCAGGTGAGCGACGCTACCCATGCCAGCCTGCTACTGCGTTTGCCTGCCGAACTGTTT TGGTTTCGTGGCCATTTTCC
Product: putative AMP-binding protein
Products: NA
Alternate protein names: AMP-Ligase; CoA Ligase; Acyl-Co A Synthetase/AMP-(Fatty) Acid Ligase; Acyl-Co A Synthetase; AMP-(Fatty) Acid Ligase; Acyl-Co A Synthetases/AMP-(Fatty) Acid Ligases-Like Protein; Surfactin Synthetase; Acyl-CoA Synthetase; Acyl-Co A Synthetase-Related Protein; Aconitate Hydratase; 4-Coumarate-CoA Ligase; Fatty Acid Degradation; Acyl-Co A Synthetase/AMP-(Fatty) Acid Ligase-Like; Peptide Synthase; Trigger Factor; AMP-(Fatty)Acid Ligases; Acyl-Co A Synthetase/AMP-(Fatty) Acid Ligase Related Enzyme; Amp-Dependent Synthetase Or Ligase Protein; 3-Phosphoshikimate 1-Carboxyvinyltransferase; Fatty Acid CoA Ligase; Amp-Dependent Synthetase And Ligase Family Protein; AMP-(Fatty)Acid Ligase; Acetyl-Co A Synthetase; Acyl-Co A Synthetases/AMP-(Fatty) Acid Ligase
Number of amino acids: Translated: 457; Mature: 457
Protein sequence:
>457_residues MDSQEKGQARLSLPMSQWLSVERDDGVIVAWRGAQAFCLGQFRRDVSALVAQLAGREEQRWALCFDDSYRFAIALLASLY ANRVPVIFGHQREAILKEQRADFDALLTDLPLDLGVPVLPVPEGGSTEIALPAWPQDPRFILYTSGSTGQPQAVTKSIAC MDRESELLAASWKDVFQGCSVIASVSHQHMYGLSFRLFLPLAFGLPFDAQLTQYHEQLIARHQGRRLVFVSSPAWLKRLD NRLALAECVEVFSAGGPLSYAEANLSQQALGVLPLEIYGTTETGSLAWRKQVREASLWRLFAGVTLTANPDNSMNVASPL IPDTGELALSDIIQLAPDGRQFQLNGRTDRIIKLEEKRLSLTEVERRLVSLPEVADAAVLTQQQTGRTVLVAAIVLSPYG KSQRQKLSEGELTRELHQALRGWLEPVALPRRWRIIDAIPLNPQGKRAYAELQELFL
Sequences:
>Translated_457_residues MDSQEKGQARLSLPMSQWLSVERDDGVIVAWRGAQAFCLGQFRRDVSALVAQLAGREEQRWALCFDDSYRFAIALLASLY ANRVPVIFGHQREAILKEQRADFDALLTDLPLDLGVPVLPVPEGGSTEIALPAWPQDPRFILYTSGSTGQPQAVTKSIAC MDRESELLAASWKDVFQGCSVIASVSHQHMYGLSFRLFLPLAFGLPFDAQLTQYHEQLIARHQGRRLVFVSSPAWLKRLD NRLALAECVEVFSAGGPLSYAEANLSQQALGVLPLEIYGTTETGSLAWRKQVREASLWRLFAGVTLTANPDNSMNVASPL IPDTGELALSDIIQLAPDGRQFQLNGRTDRIIKLEEKRLSLTEVERRLVSLPEVADAAVLTQQQTGRTVLVAAIVLSPYG KSQRQKLSEGELTRELHQALRGWLEPVALPRRWRIIDAIPLNPQGKRAYAELQELFL >Mature_457_residues MDSQEKGQARLSLPMSQWLSVERDDGVIVAWRGAQAFCLGQFRRDVSALVAQLAGREEQRWALCFDDSYRFAIALLASLY ANRVPVIFGHQREAILKEQRADFDALLTDLPLDLGVPVLPVPEGGSTEIALPAWPQDPRFILYTSGSTGQPQAVTKSIAC MDRESELLAASWKDVFQGCSVIASVSHQHMYGLSFRLFLPLAFGLPFDAQLTQYHEQLIARHQGRRLVFVSSPAWLKRLD NRLALAECVEVFSAGGPLSYAEANLSQQALGVLPLEIYGTTETGSLAWRKQVREASLWRLFAGVTLTANPDNSMNVASPL IPDTGELALSDIIQLAPDGRQFQLNGRTDRIIKLEEKRLSLTEVERRLVSLPEVADAAVLTQQQTGRTVLVAAIVLSPYG KSQRQKLSEGELTRELHQALRGWLEPVALPRRWRIIDAIPLNPQGKRAYAELQELFL
Specific function: Unknown
COG id: COG0365
COG function: function code I; Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50819; Mature: 50819
Theoretical pI: Translated: 6.28; Mature: 6.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSQEKGQARLSLPMSQWLSVERDDGVIVAWRGAQAFCLGQFRRDVSALVAQLAGREEQR CCCCCCCCEEEECCHHHHCCEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCC WALCFDDSYRFAIALLASLYANRVPVIFGHQREAILKEQRADFDALLTDLPLDLGVPVLP EEEEECCCHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHCCHHHHHHHCCHHCCCCEEE VPEGGSTEIALPAWPQDPRFILYTSGSTGQPQAVTKSIACMDRESELLAASWKDVFQGCS CCCCCCCEEEECCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHH VIASVSHQHMYGLSFRLFLPLAFGLPFDAQLTQYHEQLIARHQGRRLVFVSSPAWLKRLD HHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHH NRLALAECVEVFSAGGPLSYAEANLSQQALGVLPLEIYGTTETGSLAWRKQVREASLWRL HHHHHHHHHHHHHCCCCCCHHHHCCCHHHHCEEEEEEEECCCCCCHHHHHHHHHHHHHHH FAGVTLTANPDNSMNVASPLIPDTGELALSDIIQLAPDGRQFQLNGRTDRIIKLEEKRLS HHCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCEEEEEHHHHCC LTEVERRLVSLPEVADAAVLTQQQTGRTVLVAAIVLSPYGKSQRQKLSEGELTRELHQAL HHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEHHHHHCCCCCHHHHHCHHHHHHHHHHHHH RGWLEPVALPRRWRIIDAIPLNPQGKRAYAELQELFL HHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHCC >Mature Secondary Structure MDSQEKGQARLSLPMSQWLSVERDDGVIVAWRGAQAFCLGQFRRDVSALVAQLAGREEQR CCCCCCCCEEEECCHHHHCCEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCC WALCFDDSYRFAIALLASLYANRVPVIFGHQREAILKEQRADFDALLTDLPLDLGVPVLP EEEEECCCHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHCCHHHHHHHCCHHCCCCEEE VPEGGSTEIALPAWPQDPRFILYTSGSTGQPQAVTKSIACMDRESELLAASWKDVFQGCS CCCCCCCEEEECCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHH VIASVSHQHMYGLSFRLFLPLAFGLPFDAQLTQYHEQLIARHQGRRLVFVSSPAWLKRLD HHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHH NRLALAECVEVFSAGGPLSYAEANLSQQALGVLPLEIYGTTETGSLAWRKQVREASLWRL HHHHHHHHHHHHHCCCCCCHHHHCCCHHHHCEEEEEEEECCCCCCHHHHHHHHHHHHHHH FAGVTLTANPDNSMNVASPLIPDTGELALSDIIQLAPDGRQFQLNGRTDRIIKLEEKRLS HHCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCEEEEEHHHHCC LTEVERRLVSLPEVADAAVLTQQQTGRTVLVAAIVLSPYGKSQRQKLSEGELTRELHQAL HHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEHHHHHCCCCCHHHHHCHHHHHHHHHHHHH RGWLEPVALPRRWRIIDAIPLNPQGKRAYAELQELFL HHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA