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The map label for this gene is arrD [H]

Identifier: 157369116

GI number: 157369116

Start: 966651

End: 967163

Strand: Reverse

Name: arrD [H]

Synonym: Spro_0871

Alternate gene names: 157369116

Gene position: 967163-966651 (Counterclockwise)

Preceding gene: 157369117

Following gene: 157369115

Centisome position: 17.75

GC content: 59.84

Gene sequence:

>513_bases
ATGAGCTCACTCGCTAAACGCTGCAGCGTGGCGGCTATTCTGGCCCTCGCCGCCCTGCTGCCACAGTTCAATACCCTACA
CACCTCTGAACAGGGATTGCGCCTGATTGCCGATTTCGAAGGCTGCAGACTCTCCCCCTACCAGTGCAGTGCCGGGATAT
GGACCAACGGCATCGGCCATACCGCCGGTGTGAAATCCGGCTCCGTCATCAACGAACGTCAGGCAGCGGCCAATCTGATC
GAGGATGTCCGCACCGTCGAACACGGCATCGCACGCTGCATGGCCGTAGAGATGCCGCAGCCGGTTTACGACGCAGTCAG
CGCCTTTGCCTTCAACGTTGGCGTCAGCGCTGCCTGCAATTCCACATTGGCCACCTTTATCAAACGCCAACAATGGCAGG
CGGCTTGCGATCAGCTACCGCGCTGGATCTATGTCAAGGGCGTTAAAAGCCAGGGGCTGGAGCGCCGTCGTCATGCCGAA
CGTGCTCTGTGCCTGCAGGGTATTCAGCGCTGA

Upstream 100 bases:

>100_bases
GTCGGTGTCGGTACTTTCGCAGTGAATTGGTACTACCGGCGTAAAAGTTACCAGCTGTTGAAATCGTTAAAAAAAAACGG
TCTGAAACGCGGAGTCTACG

Downstream 100 bases:

>100_bases
TGCTGGCTGCATCGCTTCAACCACTCAAGGAGAGACATCATGCTAAAACCCGAGCAGTTGCGTACTGCGCTGACCAGCGC
TCTGCCAGACCTACAAACGC

Product: glycoside hydrolase family protein

Products: NA

Alternate protein names: Endolysin; Lysis protein; Muramidase [H]

Number of amino acids: Translated: 170; Mature: 169

Protein sequence:

>170_residues
MSSLAKRCSVAAILALAALLPQFNTLHTSEQGLRLIADFEGCRLSPYQCSAGIWTNGIGHTAGVKSGSVINERQAAANLI
EDVRTVEHGIARCMAVEMPQPVYDAVSAFAFNVGVSAACNSTLATFIKRQQWQAACDQLPRWIYVKGVKSQGLERRRHAE
RALCLQGIQR

Sequences:

>Translated_170_residues
MSSLAKRCSVAAILALAALLPQFNTLHTSEQGLRLIADFEGCRLSPYQCSAGIWTNGIGHTAGVKSGSVINERQAAANLI
EDVRTVEHGIARCMAVEMPQPVYDAVSAFAFNVGVSAACNSTLATFIKRQQWQAACDQLPRWIYVKGVKSQGLERRRHAE
RALCLQGIQR
>Mature_169_residues
SSLAKRCSVAAILALAALLPQFNTLHTSEQGLRLIADFEGCRLSPYQCSAGIWTNGIGHTAGVKSGSVINERQAAANLIE
DVRTVEHGIARCMAVEMPQPVYDAVSAFAFNVGVSAACNSTLATFIKRQQWQAACDQLPRWIYVKGVKSQGLERRRHAER
ALCLQGIQR

Specific function: Essential for lysis of bacterial cell wall, by showing cell wall hydrolyzing activity [H]

COG id: COG3772

COG function: function code R; Phage-related lysozyme (muraminidase)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 24 family [H]

Homologues:

Organism=Escherichia coli, GI1786768, Length=132, Percent_Identity=35.6060606060606, Blast_Score=80, Evalue=7e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002196 [H]

Pfam domain/function: PF00959 Phage_lysozyme [H]

EC number: =3.2.1.17 [H]

Molecular weight: Translated: 18501; Mature: 18369

Theoretical pI: Translated: 8.92; Mature: 8.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
4.1 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSLAKRCSVAAILALAALLPQFNTLHTSEQGLRLIADFEGCRLSPYQCSAGIWTNGIGH
CCHHHHHHHHHHHHHHHHHHHCHHHHCCCHHCCEEEECCCCCCCCCCCCCCCCCCCCCCC
TAGVKSGSVINERQAAANLIEDVRTVEHGIARCMAVEMPQPVYDAVSAFAFNVGVSAACN
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHH
STLATFIKRQQWQAACDQLPRWIYVKGVKSQGLERRRHAERALCLQGIQR
HHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SSLAKRCSVAAILALAALLPQFNTLHTSEQGLRLIADFEGCRLSPYQCSAGIWTNGIGH
CHHHHHHHHHHHHHHHHHHHCHHHHCCCHHCCEEEECCCCCCCCCCCCCCCCCCCCCCC
TAGVKSGSVINERQAAANLIEDVRTVEHGIARCMAVEMPQPVYDAVSAFAFNVGVSAACN
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHH
STLATFIKRQQWQAACDQLPRWIYVKGVKSQGLERRRHAERALCLQGIQR
HHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]