Definition Serratia proteamaculans 568 chromosome, complete genome.
Accession NC_009832
Length 5,448,853

Click here to switch to the map view.

The map label for this gene is 157369102

Identifier: 157369102

GI number: 157369102

Start: 952641

End: 953732

Strand: Reverse

Name: 157369102

Synonym: Spro_0857

Alternate gene names: NA

Gene position: 953732-952641 (Counterclockwise)

Preceding gene: 157369103

Following gene: 157369101

Centisome position: 17.5

GC content: 53.02

Gene sequence:

>1092_bases
GTGATCACCCAAACGCCATTGCCTATCGGGGCGCAAATAGCCCCGGACTATGCCCTATTTCTGCAACAGCAGGACGTGAC
GGAAACCTTCAGGCACCGGTTGCTATCCCTTACCCTGACTGATAACCGGGGTTTCACCGCCGACCAGTTGGTTCTTGAAC
TTGACGATACCGATGGTCAGGTGGTGATGCCGGCACGTAATCAGGTGATTACCCTAAAGCTAGGCTGGAAAGGCCAAGGG
TTAGTCAATAAGGGCAAGTTCACCATTGATGAAGTAGAACATCAGGGTGCGCCGGACAAACTCACCCTGCGCGCCCGCAG
CGTCGACTTTAGAGGTTCGATGAACACCGCTCGCGATCGTTCTTATCATGACAAAACTCTGGGGGAGATCGTCAATGAGA
TAGCGAACCGCAACCGTATGGGTAACACGCTGGCGGCGGGACTGGCCGAAATAAAGATATCCCACATTGACCAGGCTCAA
GAAACAGATGCCGCATTCATTACCCGGCTAGCCACCATGAATGGCGCGGTAGCAGCTATCAAAGATGAGCGCCTGCTGTT
TCTCATCCCAGGCTCAGGCCAAACAGTTTCAGGCAAACCCATAGCACCGCTTATCCTGCAGCGTAGAGACGGCGACCAGC
ACTATTTTAACCTGGCCGATAGAGGAAATTACTCCGGCGTTCGCGCCAAATGGCAGGATACCGAGCACGCCCAACAGCAA
CAGTTGACAGTACAACGTCAAAATGGCGCCGCCGACAACGCAGAAAGCTCCAACTATCTCGCGGGGGACAGCGATAACGT
TTTCACCTTACCCAGGGTCTATACCAACAAAGAGGCCGCCATTCGGGCAGCCAAGGCAAAATGGGAACGAATCCAACAGG
GAAGCGTGCAGTTCTCTATCAATCTGGCAATGGGCCGGCCCGAACTTTATCCGGAGATGCCTATTCAGGTACGCGGATTC
AAAGAGGCCATTGATCGGCAAAGCTGGATAATCAATACGGTGGTTCACACGTTAAACGGCAGTGGTTATGTCACCAAAAT
CGCTCTCGATGTGCTGACTCAACGGGTTGAGTTCGCCATTATCGAATCTTGA

Upstream 100 bases:

>100_bases
ATGAGTCACTGATCAGTATGTTTGGCGATCTGCGCCAGCAGGCGCTGGATTTGGCCGACAAGGCAGGGCAAGGCGTGCAA
CGCATTGGGGGGTTGCTGTC

Downstream 100 bases:

>100_bases
TTTTCATTTGAGTTTTAATCTTGCTTTTGCAAGTCATTGAGCTATTATAAGTCACATAACTTGATGCAGTCGAAAGAGGG
ATTCAACTATGATGCACTGT

Product: late control D family protein

Products: NA

Alternate protein names: Phage Late Control D Family Protein; Phage Late Control D; Bacteriophage Regulatory Protein; Phage Late Control Gene D Protein; Late Control Gene D Protein; Tail Protein D; Phage-Related Tail Protein; Phage Protein D; Phage Late Control D Protein; Phage Protein; Regulator Of Late Gene Expression; Bacteriophage Protein; Fels-2 Prophage Protein; Phage Protein D-Like; Phage Late Control; Pyocin R2_PP Tail Formation; Prophage Tail Protein; Gene D Protein; Phage Tail Protein; Phage-Related Late Control Gene Protein; Pyocin R2_PP Tail Formation GPD; Cytoplasmic Protein; Phage Late Control Gene D Protein GpD; Regulator Of Late Phage Gene Expression; Gene Late Control D Protein; Bacteriophage P2 GpD Protein; Bacteriophage Late Gene Regulator; Phage Late Control Gene D Protein-Like Protein; Phage Late Control Gene D Protein GPD; Late Control Gene D Protein Prophage; Bacteriophage Late Gene Control Protein D; Bacteriophage Late Control D Protein; Bacteriophage Tail Protein D; Bacteriophage-Related Tail D Protein; Tail Assembly T; Phage-Like Tail Protein; Late Gene Regulator; Prophage; Bacteriophage P2 Tail Protein GPD; Phage-Like Protein; Late Control D Protein; Control Protein For Phage Late Genes Expression; Phage Regulator; Phage Tail Protein D

Number of amino acids: Translated: 363; Mature: 363

Protein sequence:

>363_residues
MITQTPLPIGAQIAPDYALFLQQQDVTETFRHRLLSLTLTDNRGFTADQLVLELDDTDGQVVMPARNQVITLKLGWKGQG
LVNKGKFTIDEVEHQGAPDKLTLRARSVDFRGSMNTARDRSYHDKTLGEIVNEIANRNRMGNTLAAGLAEIKISHIDQAQ
ETDAAFITRLATMNGAVAAIKDERLLFLIPGSGQTVSGKPIAPLILQRRDGDQHYFNLADRGNYSGVRAKWQDTEHAQQQ
QLTVQRQNGAADNAESSNYLAGDSDNVFTLPRVYTNKEAAIRAAKAKWERIQQGSVQFSINLAMGRPELYPEMPIQVRGF
KEAIDRQSWIINTVVHTLNGSGYVTKIALDVLTQRVEFAIIES

Sequences:

>Translated_363_residues
MITQTPLPIGAQIAPDYALFLQQQDVTETFRHRLLSLTLTDNRGFTADQLVLELDDTDGQVVMPARNQVITLKLGWKGQG
LVNKGKFTIDEVEHQGAPDKLTLRARSVDFRGSMNTARDRSYHDKTLGEIVNEIANRNRMGNTLAAGLAEIKISHIDQAQ
ETDAAFITRLATMNGAVAAIKDERLLFLIPGSGQTVSGKPIAPLILQRRDGDQHYFNLADRGNYSGVRAKWQDTEHAQQQ
QLTVQRQNGAADNAESSNYLAGDSDNVFTLPRVYTNKEAAIRAAKAKWERIQQGSVQFSINLAMGRPELYPEMPIQVRGF
KEAIDRQSWIINTVVHTLNGSGYVTKIALDVLTQRVEFAIIES
>Mature_363_residues
MITQTPLPIGAQIAPDYALFLQQQDVTETFRHRLLSLTLTDNRGFTADQLVLELDDTDGQVVMPARNQVITLKLGWKGQG
LVNKGKFTIDEVEHQGAPDKLTLRARSVDFRGSMNTARDRSYHDKTLGEIVNEIANRNRMGNTLAAGLAEIKISHIDQAQ
ETDAAFITRLATMNGAVAAIKDERLLFLIPGSGQTVSGKPIAPLILQRRDGDQHYFNLADRGNYSGVRAKWQDTEHAQQQ
QLTVQRQNGAADNAESSNYLAGDSDNVFTLPRVYTNKEAAIRAAKAKWERIQQGSVQFSINLAMGRPELYPEMPIQVRGF
KEAIDRQSWIINTVVHTLNGSGYVTKIALDVLTQRVEFAIIES

Specific function: Unknown

COG id: COG3500

COG function: function code R; Phage protein D

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40356; Mature: 40356

Theoretical pI: Translated: 6.91; Mature: 6.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITQTPLPIGAQIAPDYALFLQQQDVTETFRHRLLSLTLTDNRGFTADQLVLELDDTDGQ
CCCCCCCCCCCEECCCEEEEEECCHHHHHHHHHEEEEEEECCCCCCCCEEEEEEECCCCE
VVMPARNQVITLKLGWKGQGLVNKGKFTIDEVEHQGAPDKLTLRARSVDFRGSMNTARDR
EEECCCCEEEEEEECCCCCCCCCCCCEEEEHHHCCCCCCEEEEEEEEEECCCCCCCHHCC
SYHDKTLGEIVNEIANRNRMGNTLAAGLAEIKISHIDQAQETDAAFITRLATMNGAVAAI
CHHHHHHHHHHHHHHCCCCCCCHHHHHHHHEEEHHCCCCHHHHHHHHHHHHHCCCCEEEE
KDERLLFLIPGSGQTVSGKPIAPLILQRRDGDQHYFNLADRGNYSGVRAKWQDTEHAQQQ
ECCEEEEEECCCCCEECCCCCCCEEEEECCCCCEEEEECCCCCCCCCEEECCCHHHHHHH
QLTVQRQNGAADNAESSNYLAGDSDNVFTLPRVYTNKEAAIRAAKAKWERIQQGSVQFSI
HHEEEECCCCCCCCCCCCEECCCCCCEEECCCEECCCHHHHHHHHHHHHHHHCCCEEEEE
NLAMGRPELYPEMPIQVRGFKEAIDRQSWIINTVVHTLNGSGYVTKIALDVLTQRVEFAI
EEEECCCCCCCCCCEEEECHHHHHCHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHEEEE
IES
ECC
>Mature Secondary Structure
MITQTPLPIGAQIAPDYALFLQQQDVTETFRHRLLSLTLTDNRGFTADQLVLELDDTDGQ
CCCCCCCCCCCEECCCEEEEEECCHHHHHHHHHEEEEEEECCCCCCCCEEEEEEECCCCE
VVMPARNQVITLKLGWKGQGLVNKGKFTIDEVEHQGAPDKLTLRARSVDFRGSMNTARDR
EEECCCCEEEEEEECCCCCCCCCCCCEEEEHHHCCCCCCEEEEEEEEEECCCCCCCHHCC
SYHDKTLGEIVNEIANRNRMGNTLAAGLAEIKISHIDQAQETDAAFITRLATMNGAVAAI
CHHHHHHHHHHHHHHCCCCCCCHHHHHHHHEEEHHCCCCHHHHHHHHHHHHHCCCCEEEE
KDERLLFLIPGSGQTVSGKPIAPLILQRRDGDQHYFNLADRGNYSGVRAKWQDTEHAQQQ
ECCEEEEEECCCCCEECCCCCCCEEEEECCCCCEEEEECCCCCCCCCEEECCCHHHHHHH
QLTVQRQNGAADNAESSNYLAGDSDNVFTLPRVYTNKEAAIRAAKAKWERIQQGSVQFSI
HHEEEECCCCCCCCCCCCEECCCCCCEEECCCEECCCHHHHHHHHHHHHHHHCCCEEEEE
NLAMGRPELYPEMPIQVRGFKEAIDRQSWIINTVVHTLNGSGYVTKIALDVLTQRVEFAI
EEEECCCCCCCCCCEEEECHHHHHCHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHEEEE
IES
ECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA