| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is 157369102
Identifier: 157369102
GI number: 157369102
Start: 952641
End: 953732
Strand: Reverse
Name: 157369102
Synonym: Spro_0857
Alternate gene names: NA
Gene position: 953732-952641 (Counterclockwise)
Preceding gene: 157369103
Following gene: 157369101
Centisome position: 17.5
GC content: 53.02
Gene sequence:
>1092_bases GTGATCACCCAAACGCCATTGCCTATCGGGGCGCAAATAGCCCCGGACTATGCCCTATTTCTGCAACAGCAGGACGTGAC GGAAACCTTCAGGCACCGGTTGCTATCCCTTACCCTGACTGATAACCGGGGTTTCACCGCCGACCAGTTGGTTCTTGAAC TTGACGATACCGATGGTCAGGTGGTGATGCCGGCACGTAATCAGGTGATTACCCTAAAGCTAGGCTGGAAAGGCCAAGGG TTAGTCAATAAGGGCAAGTTCACCATTGATGAAGTAGAACATCAGGGTGCGCCGGACAAACTCACCCTGCGCGCCCGCAG CGTCGACTTTAGAGGTTCGATGAACACCGCTCGCGATCGTTCTTATCATGACAAAACTCTGGGGGAGATCGTCAATGAGA TAGCGAACCGCAACCGTATGGGTAACACGCTGGCGGCGGGACTGGCCGAAATAAAGATATCCCACATTGACCAGGCTCAA GAAACAGATGCCGCATTCATTACCCGGCTAGCCACCATGAATGGCGCGGTAGCAGCTATCAAAGATGAGCGCCTGCTGTT TCTCATCCCAGGCTCAGGCCAAACAGTTTCAGGCAAACCCATAGCACCGCTTATCCTGCAGCGTAGAGACGGCGACCAGC ACTATTTTAACCTGGCCGATAGAGGAAATTACTCCGGCGTTCGCGCCAAATGGCAGGATACCGAGCACGCCCAACAGCAA CAGTTGACAGTACAACGTCAAAATGGCGCCGCCGACAACGCAGAAAGCTCCAACTATCTCGCGGGGGACAGCGATAACGT TTTCACCTTACCCAGGGTCTATACCAACAAAGAGGCCGCCATTCGGGCAGCCAAGGCAAAATGGGAACGAATCCAACAGG GAAGCGTGCAGTTCTCTATCAATCTGGCAATGGGCCGGCCCGAACTTTATCCGGAGATGCCTATTCAGGTACGCGGATTC AAAGAGGCCATTGATCGGCAAAGCTGGATAATCAATACGGTGGTTCACACGTTAAACGGCAGTGGTTATGTCACCAAAAT CGCTCTCGATGTGCTGACTCAACGGGTTGAGTTCGCCATTATCGAATCTTGA
Upstream 100 bases:
>100_bases ATGAGTCACTGATCAGTATGTTTGGCGATCTGCGCCAGCAGGCGCTGGATTTGGCCGACAAGGCAGGGCAAGGCGTGCAA CGCATTGGGGGGTTGCTGTC
Downstream 100 bases:
>100_bases TTTTCATTTGAGTTTTAATCTTGCTTTTGCAAGTCATTGAGCTATTATAAGTCACATAACTTGATGCAGTCGAAAGAGGG ATTCAACTATGATGCACTGT
Product: late control D family protein
Products: NA
Alternate protein names: Phage Late Control D Family Protein; Phage Late Control D; Bacteriophage Regulatory Protein; Phage Late Control Gene D Protein; Late Control Gene D Protein; Tail Protein D; Phage-Related Tail Protein; Phage Protein D; Phage Late Control D Protein; Phage Protein; Regulator Of Late Gene Expression; Bacteriophage Protein; Fels-2 Prophage Protein; Phage Protein D-Like; Phage Late Control; Pyocin R2_PP Tail Formation; Prophage Tail Protein; Gene D Protein; Phage Tail Protein; Phage-Related Late Control Gene Protein; Pyocin R2_PP Tail Formation GPD; Cytoplasmic Protein; Phage Late Control Gene D Protein GpD; Regulator Of Late Phage Gene Expression; Gene Late Control D Protein; Bacteriophage P2 GpD Protein; Bacteriophage Late Gene Regulator; Phage Late Control Gene D Protein-Like Protein; Phage Late Control Gene D Protein GPD; Late Control Gene D Protein Prophage; Bacteriophage Late Gene Control Protein D; Bacteriophage Late Control D Protein; Bacteriophage Tail Protein D; Bacteriophage-Related Tail D Protein; Tail Assembly T; Phage-Like Tail Protein; Late Gene Regulator; Prophage; Bacteriophage P2 Tail Protein GPD; Phage-Like Protein; Late Control D Protein; Control Protein For Phage Late Genes Expression; Phage Regulator; Phage Tail Protein D
Number of amino acids: Translated: 363; Mature: 363
Protein sequence:
>363_residues MITQTPLPIGAQIAPDYALFLQQQDVTETFRHRLLSLTLTDNRGFTADQLVLELDDTDGQVVMPARNQVITLKLGWKGQG LVNKGKFTIDEVEHQGAPDKLTLRARSVDFRGSMNTARDRSYHDKTLGEIVNEIANRNRMGNTLAAGLAEIKISHIDQAQ ETDAAFITRLATMNGAVAAIKDERLLFLIPGSGQTVSGKPIAPLILQRRDGDQHYFNLADRGNYSGVRAKWQDTEHAQQQ QLTVQRQNGAADNAESSNYLAGDSDNVFTLPRVYTNKEAAIRAAKAKWERIQQGSVQFSINLAMGRPELYPEMPIQVRGF KEAIDRQSWIINTVVHTLNGSGYVTKIALDVLTQRVEFAIIES
Sequences:
>Translated_363_residues MITQTPLPIGAQIAPDYALFLQQQDVTETFRHRLLSLTLTDNRGFTADQLVLELDDTDGQVVMPARNQVITLKLGWKGQG LVNKGKFTIDEVEHQGAPDKLTLRARSVDFRGSMNTARDRSYHDKTLGEIVNEIANRNRMGNTLAAGLAEIKISHIDQAQ ETDAAFITRLATMNGAVAAIKDERLLFLIPGSGQTVSGKPIAPLILQRRDGDQHYFNLADRGNYSGVRAKWQDTEHAQQQ QLTVQRQNGAADNAESSNYLAGDSDNVFTLPRVYTNKEAAIRAAKAKWERIQQGSVQFSINLAMGRPELYPEMPIQVRGF KEAIDRQSWIINTVVHTLNGSGYVTKIALDVLTQRVEFAIIES >Mature_363_residues MITQTPLPIGAQIAPDYALFLQQQDVTETFRHRLLSLTLTDNRGFTADQLVLELDDTDGQVVMPARNQVITLKLGWKGQG LVNKGKFTIDEVEHQGAPDKLTLRARSVDFRGSMNTARDRSYHDKTLGEIVNEIANRNRMGNTLAAGLAEIKISHIDQAQ ETDAAFITRLATMNGAVAAIKDERLLFLIPGSGQTVSGKPIAPLILQRRDGDQHYFNLADRGNYSGVRAKWQDTEHAQQQ QLTVQRQNGAADNAESSNYLAGDSDNVFTLPRVYTNKEAAIRAAKAKWERIQQGSVQFSINLAMGRPELYPEMPIQVRGF KEAIDRQSWIINTVVHTLNGSGYVTKIALDVLTQRVEFAIIES
Specific function: Unknown
COG id: COG3500
COG function: function code R; Phage protein D
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40356; Mature: 40356
Theoretical pI: Translated: 6.91; Mature: 6.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITQTPLPIGAQIAPDYALFLQQQDVTETFRHRLLSLTLTDNRGFTADQLVLELDDTDGQ CCCCCCCCCCCEECCCEEEEEECCHHHHHHHHHEEEEEEECCCCCCCCEEEEEEECCCCE VVMPARNQVITLKLGWKGQGLVNKGKFTIDEVEHQGAPDKLTLRARSVDFRGSMNTARDR EEECCCCEEEEEEECCCCCCCCCCCCEEEEHHHCCCCCCEEEEEEEEEECCCCCCCHHCC SYHDKTLGEIVNEIANRNRMGNTLAAGLAEIKISHIDQAQETDAAFITRLATMNGAVAAI CHHHHHHHHHHHHHHCCCCCCCHHHHHHHHEEEHHCCCCHHHHHHHHHHHHHCCCCEEEE KDERLLFLIPGSGQTVSGKPIAPLILQRRDGDQHYFNLADRGNYSGVRAKWQDTEHAQQQ ECCEEEEEECCCCCEECCCCCCCEEEEECCCCCEEEEECCCCCCCCCEEECCCHHHHHHH QLTVQRQNGAADNAESSNYLAGDSDNVFTLPRVYTNKEAAIRAAKAKWERIQQGSVQFSI HHEEEECCCCCCCCCCCCEECCCCCCEEECCCEECCCHHHHHHHHHHHHHHHCCCEEEEE NLAMGRPELYPEMPIQVRGFKEAIDRQSWIINTVVHTLNGSGYVTKIALDVLTQRVEFAI EEEECCCCCCCCCCEEEECHHHHHCHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHEEEE IES ECC >Mature Secondary Structure MITQTPLPIGAQIAPDYALFLQQQDVTETFRHRLLSLTLTDNRGFTADQLVLELDDTDGQ CCCCCCCCCCCEECCCEEEEEECCHHHHHHHHHEEEEEEECCCCCCCCEEEEEEECCCCE VVMPARNQVITLKLGWKGQGLVNKGKFTIDEVEHQGAPDKLTLRARSVDFRGSMNTARDR EEECCCCEEEEEEECCCCCCCCCCCCEEEEHHHCCCCCCEEEEEEEEEECCCCCCCHHCC SYHDKTLGEIVNEIANRNRMGNTLAAGLAEIKISHIDQAQETDAAFITRLATMNGAVAAI CHHHHHHHHHHHHHHCCCCCCCHHHHHHHHEEEHHCCCCHHHHHHHHHHHHHCCCCEEEE KDERLLFLIPGSGQTVSGKPIAPLILQRRDGDQHYFNLADRGNYSGVRAKWQDTEHAQQQ ECCEEEEEECCCCCEECCCCCCCEEEEECCCCCEEEEECCCCCCCCCEEECCCHHHHHHH QLTVQRQNGAADNAESSNYLAGDSDNVFTLPRVYTNKEAAIRAAKAKWERIQQGSVQFSI HHEEEECCCCCCCCCCCCEECCCCCCEEECCCEECCCHHHHHHHHHHHHHHHCCCEEEEE NLAMGRPELYPEMPIQVRGFKEAIDRQSWIINTVVHTLNGSGYVTKIALDVLTQRVEFAI EEEECCCCCCCCCCEEEECHHHHHCHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHEEEE IES ECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA