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The map label for this gene is ypjD [H]

Identifier: 157369095

GI number: 157369095

Start: 947594

End: 948448

Strand: Reverse

Name: ypjD [H]

Synonym: Spro_0850

Alternate gene names: 157369095

Gene position: 948448-947594 (Counterclockwise)

Preceding gene: 157369101

Following gene: 157369094

Centisome position: 17.41

GC content: 54.15

Gene sequence:

>855_bases
GTGGGACGCGCACGACGCTATACTGACAATCCAATTCACCACGCCGAAGCAAAATTAAACGCTATGCCAGTTTTCTCCAT
TGTGGCTTTGATCGCCTACCTGCTCAGCCTTGGACTGATTATTCCCAGCTTGTTGCGGAAGAACAGCGCATACCGTCGGC
TTGCTCTCGTCTCGGCGGTGGTGGCGCTGGTTTGCCACGCCATCGCTCTGCAGCAGCGTATTTTTGACGTTAGCGCCGGA
CAAAATCTCAGCTTGCTGAACATCGGTTCGATAGTCAGCCTGATCATCTGTTCGGTCATGACCTTTGTCGCCTCACGCGA
CCGTGGCTGGTTCCTGCTGCCGATTGTTTATAGCTTCGCGATGATCAATCTGGCCTTCGCCAGCTTTATGCCGGGTGAGT
TCATTACCCATCTTGAAGCCAGTCCGGAACTGATGGTGCATATTGGCCTGGCGCTGTTCTCCTACGCTACGCTGATTATT
GCCGCGCTGTATGCGCTGCAACTGGCCTGGCTGGACTACCTGCTGAAAAACAAAAAGCTGTCGTTCAGCGCCGACATGCC
ACCGCTGATGAGCATCGAACGCAAAATGTTCCACATCACCCAGATCGGTGTCGTGTTGCTCACGCTCACGTTATGCACCG
GCCTGCTGTATATGGATAACCTGTTCAGCAAAGAAAACGTGCACAAGGCCGTGCTGTCGATCATGGCATGGTTTGTCTAT
ATCGTTTTGCTGTGGGGCCATTACCATGAAGGCTGGCGTGGCCGCCGTGTCGTGTGGTTCAGCTTTGCCGGCGCCTTTCT
GCTAACGCTGGCCTACTTCGGCAGCCGTCTGATCCAGCAAGTGATGGTTCGCTAA

Upstream 100 bases:

>100_bases
TTGCTCAACGTGTAATGACAGGCCGCTCTGGCGACATAATTGCGGCGATTATAACACGAAGCTAAGAGGATCTCTGCCTC
AGCGTTGGAGATCGGTTGGA

Downstream 100 bases:

>100_bases
GCCCTCAGGCTATCTTTCTCCATACATAAGGAATACCGCGTTGGAGCACGTTTCGACAGGGACCCTGATCATTATCCTGG
TGGTTATGATCGTGGTTTCC

Product: cytochrome c assembly protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 284; Mature: 283

Protein sequence:

>284_residues
MGRARRYTDNPIHHAEAKLNAMPVFSIVALIAYLLSLGLIIPSLLRKNSAYRRLALVSAVVALVCHAIALQQRIFDVSAG
QNLSLLNIGSIVSLIICSVMTFVASRDRGWFLLPIVYSFAMINLAFASFMPGEFITHLEASPELMVHIGLALFSYATLII
AALYALQLAWLDYLLKNKKLSFSADMPPLMSIERKMFHITQIGVVLLTLTLCTGLLYMDNLFSKENVHKAVLSIMAWFVY
IVLLWGHYHEGWRGRRVVWFSFAGAFLLTLAYFGSRLIQQVMVR

Sequences:

>Translated_284_residues
MGRARRYTDNPIHHAEAKLNAMPVFSIVALIAYLLSLGLIIPSLLRKNSAYRRLALVSAVVALVCHAIALQQRIFDVSAG
QNLSLLNIGSIVSLIICSVMTFVASRDRGWFLLPIVYSFAMINLAFASFMPGEFITHLEASPELMVHIGLALFSYATLII
AALYALQLAWLDYLLKNKKLSFSADMPPLMSIERKMFHITQIGVVLLTLTLCTGLLYMDNLFSKENVHKAVLSIMAWFVY
IVLLWGHYHEGWRGRRVVWFSFAGAFLLTLAYFGSRLIQQVMVR
>Mature_283_residues
GRARRYTDNPIHHAEAKLNAMPVFSIVALIAYLLSLGLIIPSLLRKNSAYRRLALVSAVVALVCHAIALQQRIFDVSAGQ
NLSLLNIGSIVSLIICSVMTFVASRDRGWFLLPIVYSFAMINLAFASFMPGEFITHLEASPELMVHIGLALFSYATLIIA
ALYALQLAWLDYLLKNKKLSFSADMPPLMSIERKMFHITQIGVVLLTLTLCTGLLYMDNLFSKENVHKAVLSIMAWFVYI
VLLWGHYHEGWRGRRVVWFSFAGAFLLTLAYFGSRLIQQVMVR

Specific function: Unknown

COG id: COG4137

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI145693174, Length=262, Percent_Identity=76.3358778625954, Blast_Score=400, Evalue=1e-113,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002541 [H]

Pfam domain/function: PF01578 Cytochrom_C_asm [H]

EC number: NA

Molecular weight: Translated: 31960; Mature: 31829

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRARRYTDNPIHHAEAKLNAMPVFSIVALIAYLLSLGLIIPSLLRKNSAYRRLALVSAV
CCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
VALVCHAIALQQRIFDVSAGQNLSLLNIGSIVSLIICSVMTFVASRDRGWFLLPIVYSFA
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHH
MINLAFASFMPGEFITHLEASPELMVHIGLALFSYATLIIAALYALQLAWLDYLLKNKKL
HHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
SFSADMPPLMSIERKMFHITQIGVVLLTLTLCTGLLYMDNLFSKENVHKAVLSIMAWFVY
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
IVLLWGHYHEGWRGRRVVWFSFAGAFLLTLAYFGSRLIQQVMVR
HHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GRARRYTDNPIHHAEAKLNAMPVFSIVALIAYLLSLGLIIPSLLRKNSAYRRLALVSAV
CCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
VALVCHAIALQQRIFDVSAGQNLSLLNIGSIVSLIICSVMTFVASRDRGWFLLPIVYSFA
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHH
MINLAFASFMPGEFITHLEASPELMVHIGLALFSYATLIIAALYALQLAWLDYLLKNKKL
HHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
SFSADMPPLMSIERKMFHITQIGVVLLTLTLCTGLLYMDNLFSKENVHKAVLSIMAWFVY
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
IVLLWGHYHEGWRGRRVVWFSFAGAFLLTLAYFGSRLIQQVMVR
HHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]