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The map label for this gene is ygaD [C]

Identifier: 157369085

GI number: 157369085

Start: 936469

End: 936957

Strand: Direct

Name: ygaD [C]

Synonym: Spro_0840

Alternate gene names: 157369085

Gene position: 936469-936957 (Clockwise)

Preceding gene: 157369083

Following gene: 157369086

Centisome position: 17.19

GC content: 60.33

Gene sequence:

>489_bases
ATGAGTGAAAATCAACTGCGTAAACTCAGCATTGCGGTGGGCGAAAAACTGAAGGCCAACGGCCAGTGGATCACCTGTGC
GGAATCCTGCACCGGTGGCGGCATCGCCAAAGCCATCACCGACATTGCCGGGAGTTCTGCCTATTTCGATCGCGGCTTTG
TCACCTACAGCAATACGGCGAAACATGAGTTGCTGGGCGTGGCGGAGGCGACTCTGACGGCCCATGGCGCAGTGAGCGAA
GAGGTGGTGCGCGAGATGGCCCAGGGGGCGTTACACGCAGCACGTGCCAGCCTGGCGCTGTCGGTCAGCGGCATTGCCGG
GCCGGACGGTGGCAGTGCGGAAAAACCGGTGGGCACCGTCTGGTTTGGCTTTGCCGACGGCTCTGGACGGGTACTGGCGC
ACAGGAAGCAATTTGCCGGCGATCGTGATGCCGTGCGGCTTCAGGCGACGATTTTTGCGCTGCAAACCGCGCTTGATGAT
TTTTTGTAA

Upstream 100 bases:

>100_bases
CTCGCCTGCGAAGCGGCGCGCATTTCTGTCAACGCGCGCTCGGGCAAGCTTGATAAATGCTACTATCGGGCGCATATACC
TGATTCGCTAAGGAGAGGTT

Downstream 100 bases:

>100_bases
AATTAGGCTTGATACTGTATGACCATACAGTATAATTAGTGACATTTCCTGCACAACATACAATCAGTGGCAGTGTGGGG
TAACACCGACATTGCGTAAC

Product: competence damage-inducible protein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 162; Mature: 161

Protein sequence:

>162_residues
MSENQLRKLSIAVGEKLKANGQWITCAESCTGGGIAKAITDIAGSSAYFDRGFVTYSNTAKHELLGVAEATLTAHGAVSE
EVVREMAQGALHAARASLALSVSGIAGPDGGSAEKPVGTVWFGFADGSGRVLAHRKQFAGDRDAVRLQATIFALQTALDD
FL

Sequences:

>Translated_162_residues
MSENQLRKLSIAVGEKLKANGQWITCAESCTGGGIAKAITDIAGSSAYFDRGFVTYSNTAKHELLGVAEATLTAHGAVSE
EVVREMAQGALHAARASLALSVSGIAGPDGGSAEKPVGTVWFGFADGSGRVLAHRKQFAGDRDAVRLQATIFALQTALDD
FL
>Mature_161_residues
SENQLRKLSIAVGEKLKANGQWITCAESCTGGGIAKAITDIAGSSAYFDRGFVTYSNTAKHELLGVAEATLTAHGAVSEE
VVREMAQGALHAARASLALSVSGIAGPDGGSAEKPVGTVWFGFADGSGRVLAHRKQFAGDRDAVRLQATIFALQTALDDF
L

Specific function: Unknown

COG id: COG1546

COG function: function code R; Uncharacterized protein (competence- and mitomycin-induced)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CinA family [H]

Homologues:

Organism=Escherichia coli, GI1789052, Length=162, Percent_Identity=64.8148148148148, Blast_Score=206, Evalue=4e-55,
Organism=Escherichia coli, GI1787818, Length=149, Percent_Identity=36.241610738255, Blast_Score=98, Evalue=3e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008136 [H]

Pfam domain/function: PF02464 CinA [H]

EC number: NA

Molecular weight: Translated: 16825; Mature: 16694

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSENQLRKLSIAVGEKLKANGQWITCAESCTGGGIAKAITDIAGSSAYFDRGFVTYSNTA
CCCCHHHHHHHHHCCEEECCCCEEEECCCCCCCHHHHHHHHHCCCCCCCCCCEEEECCCC
KHELLGVAEATLTAHGAVSEEVVREMAQGALHAARASLALSVSGIAGPDGGSAEKPVGTV
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCEEE
WFGFADGSGRVLAHRKQFAGDRDAVRLQATIFALQTALDDFL
EEEEECCCCCEEEEHHHHCCCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SENQLRKLSIAVGEKLKANGQWITCAESCTGGGIAKAITDIAGSSAYFDRGFVTYSNTA
CCCHHHHHHHHHCCEEECCCCEEEECCCCCCCHHHHHHHHHCCCCCCCCCCEEEECCCC
KHELLGVAEATLTAHGAVSEEVVREMAQGALHAARASLALSVSGIAGPDGGSAEKPVGTV
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCEEE
WFGFADGSGRVLAHRKQFAGDRDAVRLQATIFALQTALDDFL
EEEEECCCCCEEEEHHHHCCCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA