| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is artQ [H]
Identifier: 157369068
GI number: 157369068
Start: 917844
End: 918608
Strand: Reverse
Name: artQ [H]
Synonym: Spro_0823
Alternate gene names: 157369068
Gene position: 918608-917844 (Counterclockwise)
Preceding gene: 157369069
Following gene: 157369067
Centisome position: 16.86
GC content: 57.39
Gene sequence:
>765_bases TTGAATTTCCGTTGGGAGATTATCCAGGAATATGCCCCGCTGTTTATGGAAGGCGCCTGGATGACCATCAAATGCACCAT TATCTGCGTGATACTGGGCACCACCTGGGGGCTGCTCCTGGGGTTAGGCCGTCTGGCGCAAGCGCCGCATGGCATCTGGA AACCAATACTGCATTACGGCGTACAGTGGCCGGTGCGCATTTATATCAGCGCCTTCCGCGGCACGCCGCTGTTCGTGCAG ATCATGGTAGTGCACTTCGCCCTGGTGCCGCTGTTTATTAACCCGCGTGACGGCCTGCTGGTCACCAACGGCCTGATGAG CAGTGATTTTGCCCGTGCATTGCGCTCCGACTATGGCGCATTTCTTTCCTGCGTGGTGGCAATAACGCTCAACGCCGGCG CCTACGTCTCGGAAATTTTCCGCGCCGGGATTCAGTCAATCGATCGCGGCCAGATGGAAGCTTCGCGCTCGCTGGGCATG GGCTACGGCAAAACCATGCGCAAAGTGATCCTGCCGCAGGCATTCCGTCGCATGCTGCCACCGCTGGGCAATAACGCCAT TGCCATCGTCAAGGATTCCTCACTGGCCTCCGCCATCGGTCTGGCCGATTTGGCCTATGCCGCCCGGACGGTTTCCGGCG CTTATGCCACCTATTGGGAGCCTTACCTGACCATTTCGCTGGTCTATTGGGTCCTCACCTTCCTGCTTTCGCTGATGGTG CAACACATGGAAAAGAGGTTCGGGAAAAGTGATTCGCGTACATAA
Upstream 100 bases:
>100_bases GCAACGTGCCGACACTGCCTGCCGAATAAGCCTTAAGTGACCGGAGCTCGCACGAGCTCCGGAGCAACACTATCGTGAGA ACACCGAGAAGGAACACCCA
Downstream 100 bases:
>100_bases CCTGCAAAAACAATTCGGCGAAAGCCACGTACTGCGTGGTATCTCCTGCGAGATCGCGGCCAACGAAGTGGTCTGCGTCA TTGGCCCGTCCGGTTCCGGT
Product: polar amino acid ABC transporter inner membrane subunit
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 254; Mature: 254
Protein sequence:
>254_residues MNFRWEIIQEYAPLFMEGAWMTIKCTIICVILGTTWGLLLGLGRLAQAPHGIWKPILHYGVQWPVRIYISAFRGTPLFVQ IMVVHFALVPLFINPRDGLLVTNGLMSSDFARALRSDYGAFLSCVVAITLNAGAYVSEIFRAGIQSIDRGQMEASRSLGM GYGKTMRKVILPQAFRRMLPPLGNNAIAIVKDSSLASAIGLADLAYAARTVSGAYATYWEPYLTISLVYWVLTFLLSLMV QHMEKRFGKSDSRT
Sequences:
>Translated_254_residues MNFRWEIIQEYAPLFMEGAWMTIKCTIICVILGTTWGLLLGLGRLAQAPHGIWKPILHYGVQWPVRIYISAFRGTPLFVQ IMVVHFALVPLFINPRDGLLVTNGLMSSDFARALRSDYGAFLSCVVAITLNAGAYVSEIFRAGIQSIDRGQMEASRSLGM GYGKTMRKVILPQAFRRMLPPLGNNAIAIVKDSSLASAIGLADLAYAARTVSGAYATYWEPYLTISLVYWVLTFLLSLMV QHMEKRFGKSDSRT >Mature_254_residues MNFRWEIIQEYAPLFMEGAWMTIKCTIICVILGTTWGLLLGLGRLAQAPHGIWKPILHYGVQWPVRIYISAFRGTPLFVQ IMVVHFALVPLFINPRDGLLVTNGLMSSDFARALRSDYGAFLSCVVAITLNAGAYVSEIFRAGIQSIDRGQMEASRSLGM GYGKTMRKVILPQAFRRMLPPLGNNAIAIVKDSSLASAIGLADLAYAARTVSGAYATYWEPYLTISLVYWVLTFLLSLMV QHMEKRFGKSDSRT
Specific function: Part of a binding-protein-dependent transport system for arginine. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0765
COG function: function code E; ABC-type amino acid transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1788226, Length=246, Percent_Identity=33.3333333333333, Blast_Score=138, Evalue=3e-34, Organism=Escherichia coli, GI1786873, Length=246, Percent_Identity=33.739837398374, Blast_Score=128, Evalue=3e-31, Organism=Escherichia coli, GI1787030, Length=246, Percent_Identity=34.9593495934959, Blast_Score=126, Evalue=1e-30, Organism=Escherichia coli, GI87082239, Length=240, Percent_Identity=33.3333333333333, Blast_Score=106, Evalue=2e-24, Organism=Escherichia coli, GI1788645, Length=249, Percent_Identity=28.5140562248996, Blast_Score=103, Evalue=1e-23, Organism=Escherichia coli, GI1786874, Length=180, Percent_Identity=30.5555555555556, Blast_Score=92, Evalue=3e-20, Organism=Escherichia coli, GI1787087, Length=247, Percent_Identity=23.4817813765182, Blast_Score=91, Evalue=5e-20, Organism=Escherichia coli, GI48994930, Length=125, Percent_Identity=38.4, Blast_Score=86, Evalue=2e-18, Organism=Escherichia coli, GI1788646, Length=246, Percent_Identity=23.9837398373984, Blast_Score=79, Evalue=4e-16, Organism=Escherichia coli, GI1787086, Length=238, Percent_Identity=27.3109243697479, Blast_Score=77, Evalue=1e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010065 - InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 28294; Mature: 28294
Theoretical pI: Translated: 9.91; Mature: 9.91
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFRWEIIQEYAPLFMEGAWMTIKCTIICVILGTTWGLLLGLGRLAQAPHGIWKPILHYG CCCHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCC VQWPVRIYISAFRGTPLFVQIMVVHFALVPLFINPRDGLLVTNGLMSSDFARALRSDYGA CCCHHHHEEEHHCCCHHHHHHHHHHHHHHHHEECCCCCEEEECCCHHHHHHHHHHHHHHH FLSCVVAITLNAGAYVSEIFRAGIQSIDRGQMEASRSLGMGYGKTMRKVILPQAFRRMLP HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC PLGNNAIAIVKDSSLASAIGLADLAYAARTVSGAYATYWEPYLTISLVYWVLTFLLSLMV CCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH QHMEKRFGKSDSRT HHHHHHCCCCCCCC >Mature Secondary Structure MNFRWEIIQEYAPLFMEGAWMTIKCTIICVILGTTWGLLLGLGRLAQAPHGIWKPILHYG CCCHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCC VQWPVRIYISAFRGTPLFVQIMVVHFALVPLFINPRDGLLVTNGLMSSDFARALRSDYGA CCCHHHHEEEHHCCCHHHHHHHHHHHHHHHHEECCCCCEEEECCCHHHHHHHHHHHHHHH FLSCVVAITLNAGAYVSEIFRAGIQSIDRGQMEASRSLGMGYGKTMRKVILPQAFRRMLP HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC PLGNNAIAIVKDSSLASAIGLADLAYAARTVSGAYATYWEPYLTISLVYWVLTFLLSLMV CCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH QHMEKRFGKSDSRT HHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]