Click here to switch to the map view.

The map label for this gene is yjjU [H]

Identifier: 157368901

GI number: 157368901

Start: 719892

End: 721013

Strand: Direct

Name: yjjU [H]

Synonym: Spro_0656

Alternate gene names: 157368901

Gene position: 719892-721013 (Clockwise)

Preceding gene: 157368900

Following gene: 157368902

Centisome position: 13.21

GC content: 57.93

Gene sequence:

>1122_bases
TTGGGATACAGAATACCCATCACGCTCGGCAATATCGAACCGCTGGCGTATAAACCTTACCGGCCCGGTAAAATGGCGCT
GGTATGTGAAGGGGGCGGGCAGCGCGGCATTTTCACTGCCGGCGTGCTGGACGAGTTCCAGCGTGCCCGCTTTAATCCTT
TTGATCTGATGATCGGCACTTCTGCCGGCGCGCAAAACCTCTCGGCTTTTATTTGTGGCCAGATGGGTTACGCGCGGCGG
GTGATCACCCGCTACACCACTTCCGCTGAATTTTTTAACCCATTGCGCTTTGTGCGCGGTGGGCATCTTATCGATCTCGA
CTGGCTGCTCGATACCACGACCCAACAGCTGCCGCTGGCGATGGACGTTGCGGAAAAAAGCCTGGTTGATGGCCGTGAAT
TCCTGATGTGCGCCTGCCGCAGTGATGACTTCGAACCGACCTACCTGCCCGCGCAACGCGAAAGCTGGCTACCGGCCATT
AAAGCATCCAGCGCCATCCCCGGTTTTTACCGCATGGGAGTGGAGTTGGACGGCGTCAGCTATCAGGATGGTGGCATCAG
CGATGCGATCCCGGTTGAAGAAGCCTATCGCCGTGGCGCGGATACCATCGTGGTGATCCGCACCGTGCCGTCGCAGATGT
ACTACACGCCGCAGTGGATGAAACGCATGGAGCACTGGCTGAGCGAAAGCAGCCTGCAGCAGATGGTGCGCATCCTGCAA
CACCACGAACAAAGTTACCACCGCATCCAGCAGTTTATTGAGAAGCCGCCCGGCGAGCTGCGCATCTTCGAGATTTTCCC
GCCGAAGCCGTTGGCCAGTAATGCCCTGGGGAGTCGCGTCACGTCGCTCAATCAGGACTATCACCTGGGCCGTAAGTGCG
GGCGCTATTTCCTGGCAACCGTCGGTCACTGGCTGGTAGAACAGGACAAACTGGACGGCATGAAGGTGAAAAAGGCGCTG
TCGCGTCGTTTGATCCAACCGGAAAACGTCATCATGCCTTCACCGATTATTACTGACATCAGTCACCCGCGCGATCTTGC
CAACCCGTCGGAAGCCAAACTGGCGGCGATGGACATTATTTTGCCGGGCGAAGTACCACCGGGCGAGGGTGGCCTGCTGT
GA

Upstream 100 bases:

>100_bases
ATGGGCAGCAATGATTGCCTCTCTGGTGTACTGCAAGAGGATTACGGAAGAGAGCAAGACAAGGTATCCTCGGGTAAAAC
GTCTCACTGAGGATGCAGGG

Downstream 100 bases:

>100_bases
TGCACGACTTCACCGACACCCACTGCCACTTCGATTTCCCGCCGTTCAGCGGTCAAGAACGCGAAAGCCTGGAGTTGGCG
GAGCAAGCGGGCGTGCGACG

Product: patatin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 373; Mature: 372

Protein sequence:

>373_residues
MGYRIPITLGNIEPLAYKPYRPGKMALVCEGGGQRGIFTAGVLDEFQRARFNPFDLMIGTSAGAQNLSAFICGQMGYARR
VITRYTTSAEFFNPLRFVRGGHLIDLDWLLDTTTQQLPLAMDVAEKSLVDGREFLMCACRSDDFEPTYLPAQRESWLPAI
KASSAIPGFYRMGVELDGVSYQDGGISDAIPVEEAYRRGADTIVVIRTVPSQMYYTPQWMKRMEHWLSESSLQQMVRILQ
HHEQSYHRIQQFIEKPPGELRIFEIFPPKPLASNALGSRVTSLNQDYHLGRKCGRYFLATVGHWLVEQDKLDGMKVKKAL
SRRLIQPENVIMPSPIITDISHPRDLANPSEAKLAAMDIILPGEVPPGEGGLL

Sequences:

>Translated_373_residues
MGYRIPITLGNIEPLAYKPYRPGKMALVCEGGGQRGIFTAGVLDEFQRARFNPFDLMIGTSAGAQNLSAFICGQMGYARR
VITRYTTSAEFFNPLRFVRGGHLIDLDWLLDTTTQQLPLAMDVAEKSLVDGREFLMCACRSDDFEPTYLPAQRESWLPAI
KASSAIPGFYRMGVELDGVSYQDGGISDAIPVEEAYRRGADTIVVIRTVPSQMYYTPQWMKRMEHWLSESSLQQMVRILQ
HHEQSYHRIQQFIEKPPGELRIFEIFPPKPLASNALGSRVTSLNQDYHLGRKCGRYFLATVGHWLVEQDKLDGMKVKKAL
SRRLIQPENVIMPSPIITDISHPRDLANPSEAKLAAMDIILPGEVPPGEGGLL
>Mature_372_residues
GYRIPITLGNIEPLAYKPYRPGKMALVCEGGGQRGIFTAGVLDEFQRARFNPFDLMIGTSAGAQNLSAFICGQMGYARRV
ITRYTTSAEFFNPLRFVRGGHLIDLDWLLDTTTQQLPLAMDVAEKSLVDGREFLMCACRSDDFEPTYLPAQRESWLPAIK
ASSAIPGFYRMGVELDGVSYQDGGISDAIPVEEAYRRGADTIVVIRTVPSQMYYTPQWMKRMEHWLSESSLQQMVRILQH
HEQSYHRIQQFIEKPPGELRIFEIFPPKPLASNALGSRVTSLNQDYHLGRKCGRYFLATVGHWLVEQDKLDGMKVKKALS
RRLIQPENVIMPSPIITDISHPRDLANPSEAKLAAMDIILPGEVPPGEGGLL

Specific function: Probable lipid hydrolase [H]

COG id: COG4667

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 patatin domain [H]

Homologues:

Organism=Escherichia coli, GI1790837, Length=343, Percent_Identity=65.8892128279883, Blast_Score=475, Evalue=1e-135,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016035
- InterPro:   IPR002641 [H]

Pfam domain/function: PF01734 Patatin [H]

EC number: NA

Molecular weight: Translated: 41892; Mature: 41761

Theoretical pI: Translated: 7.22; Mature: 7.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGYRIPITLGNIEPLAYKPYRPGKMALVCEGGGQRGIFTAGVLDEFQRARFNPFDLMIGT
CCEEEEEEECCCCCCEECCCCCCCEEEEECCCCCCCEEEHHHHHHHHHCCCCCEEEEEEC
SAGAQNLSAFICGQMGYARRVITRYTTSAEFFNPLRFVRGGHLIDLDWLLDTTTQQLPLA
CCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEHHHHCCCHHHCCHH
MDVAEKSLVDGREFLMCACRSDDFEPTYLPAQRESWLPAIKASSAIPGFYRMGVELDGVS
HHHHHHHHHCCHHHEEEEECCCCCCCCCCCCCHHCCCCHHHCCCCCCCHHHCCEEECCCC
YQDGGISDAIPVEEAYRRGADTIVVIRTVPSQMYYTPQWMKRMEHWLSESSLQQMVRILQ
CCCCCCCCCCCHHHHHHCCCCEEEEEEECCCCCEECHHHHHHHHHHHCHHHHHHHHHHHH
HHEQSYHRIQQFIEKPPGELRIFEIFPPKPLASNALGSRVTSLNQDYHLGRKCGRYFLAT
HHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
VGHWLVEQDKLDGMKVKKALSRRLIQPENVIMPSPIITDISHPRDLANPSEAKLAAMDII
HHHHHHHHHCCCCHHHHHHHHHHCCCCCCEECCCCHHHCCCCCHHCCCCCCCEEEEEEEE
LPGEVPPGEGGLL
ECCCCCCCCCCCC
>Mature Secondary Structure 
GYRIPITLGNIEPLAYKPYRPGKMALVCEGGGQRGIFTAGVLDEFQRARFNPFDLMIGT
CEEEEEEECCCCCCEECCCCCCCEEEEECCCCCCCEEEHHHHHHHHHCCCCCEEEEEEC
SAGAQNLSAFICGQMGYARRVITRYTTSAEFFNPLRFVRGGHLIDLDWLLDTTTQQLPLA
CCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEHHHHCCCHHHCCHH
MDVAEKSLVDGREFLMCACRSDDFEPTYLPAQRESWLPAIKASSAIPGFYRMGVELDGVS
HHHHHHHHHCCHHHEEEEECCCCCCCCCCCCCHHCCCCHHHCCCCCCCHHHCCEEECCCC
YQDGGISDAIPVEEAYRRGADTIVVIRTVPSQMYYTPQWMKRMEHWLSESSLQQMVRILQ
CCCCCCCCCCCHHHHHHCCCCEEEEEEECCCCCEECHHHHHHHHHHHCHHHHHHHHHHHH
HHEQSYHRIQQFIEKPPGELRIFEIFPPKPLASNALGSRVTSLNQDYHLGRKCGRYFLAT
HHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
VGHWLVEQDKLDGMKVKKALSRRLIQPENVIMPSPIITDISHPRDLANPSEAKLAAMDII
HHHHHHHHHCCCCHHHHHHHHHHCCCCCCEECCCCHHHCCCCCHHCCCCCCCEEEEEEEE
LPGEVPPGEGGLL
ECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]