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The map label for this gene is lptF [H]

Identifier: 157368808

GI number: 157368808

Start: 624761

End: 625855

Strand: Direct

Name: lptF [H]

Synonym: Spro_0563

Alternate gene names: 157368808

Gene position: 624761-625855 (Clockwise)

Preceding gene: 157368803

Following gene: 157368809

Centisome position: 11.47

GC content: 58.08

Gene sequence:

>1095_bases
GTGATCATCATAAGATATCTGGTACGGGAAACGCTAAAGAGCCAAATCGCGATCCTGTTCATCCTGCTTCTGATCTTCTT
TTGTCAGAATTTAGTCAGGGTGTTAGGCGATGCGGTGGACGGCGATGTCCCGACAAATTTAGTTCTTTCTTTGCTCGCAT
TGGGTGTGCCGAAGATGGCGCAGCTAATCCTGCCATTAAGCCTGTTTCTCGGCTTGTTGATGACGCTTGGGCGGCTGTAT
ACCGACAGCGAAATCACCGTGATGCACGCCTGCGGATTGGGTAAACGAACCCTGATCATTGCGGCCATGGTATTGGCACT
TTTCACCTCCGTTATTGCGGCGGCCAACGTGTTCTGGGTCGGGCCCTGGGCTTCGCGCTATCAGGACGTGGTGGTTTCCG
AAGCCAAAGCCAACCCAAGCATTGCCGGGCTGGCAGAAGGGCAGTTCAAGACCTCGCAAGACGGCAACGCGGTGCTGTTT
ATCGGCAACGTTAAGGGCAGCACCTTTAACAACGTGTTCCTGGCGCAACTGCGGCCGAACGGCAACCAGCGCCCTTCCGT
GGTGGTGGCTGAACATGGCCAGATTAACCAGATGAAAGACGGTTCGCAGGTGGTGACGCTGGACAAGGGCACCCGCTTTG
AGGGCACCGCGCTGCTGCGTGACTTCCGCATTACCGATTTCAACGACTATAAAGCGGTGGTAGGCCACCGTGCGGTCACC
GTGGACGGCAACCAGGCCGAGCAGATGTCGATGAAGACGCTGCTGGCGTCTGACGATCCGGACGCGCGCGCCGAGTTCCA
CTGGCGCCTGACGTTGGTGCTTTCCGTGGTCATTATGGCGTTGCTGGTGGTGCCGCTCAGCGTGGTGAACCCGCGTCAGG
GCCGCGTGCTGAGCATGCTGCCGGCCATCCTGCTGTATTTGATATTCTTCCTGCTGCAGACCTCGCTGCGTTCTAACGGC
GGCAAGGGCAAGCTGGATCCGATGGTATGGCTGTGGGTAGTCAACGCGGCGTACTTTGCGATCGCGCTGGCGCTGAACCT
GTGGGATACGGTGCCGATGCGTAAGCTGCGTGCACGCCTGAGAGGAGCGGCCTGA

Upstream 100 bases:

>100_bases
TTAGCTGTGTCGGTTGCCATATGATGAGAATAAATGGCGGATTAGCGATGAAACTATCGATTTTCCTGCAAAAAGACAAG
TTTTCACAGGCGTAATAAGC

Downstream 100 bases:

>100_bases
TGTTTGGCGTTTTAGACCGATATATCGGTAAGACGATTTTCAACACCATCATCATGACGCTGTTCATGCTGGTGTCGCTT
TCCGGCATCATCAAGTTCGT

Product: permease YjgP/YjgQ family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 364; Mature: 364

Protein sequence:

>364_residues
MIIIRYLVRETLKSQIAILFILLLIFFCQNLVRVLGDAVDGDVPTNLVLSLLALGVPKMAQLILPLSLFLGLLMTLGRLY
TDSEITVMHACGLGKRTLIIAAMVLALFTSVIAAANVFWVGPWASRYQDVVVSEAKANPSIAGLAEGQFKTSQDGNAVLF
IGNVKGSTFNNVFLAQLRPNGNQRPSVVVAEHGQINQMKDGSQVVTLDKGTRFEGTALLRDFRITDFNDYKAVVGHRAVT
VDGNQAEQMSMKTLLASDDPDARAEFHWRLTLVLSVVIMALLVVPLSVVNPRQGRVLSMLPAILLYLIFFLLQTSLRSNG
GKGKLDPMVWLWVVNAAYFAIALALNLWDTVPMRKLRARLRGAA

Sequences:

>Translated_364_residues
MIIIRYLVRETLKSQIAILFILLLIFFCQNLVRVLGDAVDGDVPTNLVLSLLALGVPKMAQLILPLSLFLGLLMTLGRLY
TDSEITVMHACGLGKRTLIIAAMVLALFTSVIAAANVFWVGPWASRYQDVVVSEAKANPSIAGLAEGQFKTSQDGNAVLF
IGNVKGSTFNNVFLAQLRPNGNQRPSVVVAEHGQINQMKDGSQVVTLDKGTRFEGTALLRDFRITDFNDYKAVVGHRAVT
VDGNQAEQMSMKTLLASDDPDARAEFHWRLTLVLSVVIMALLVVPLSVVNPRQGRVLSMLPAILLYLIFFLLQTSLRSNG
GKGKLDPMVWLWVVNAAYFAIALALNLWDTVPMRKLRARLRGAA
>Mature_364_residues
MIIIRYLVRETLKSQIAILFILLLIFFCQNLVRVLGDAVDGDVPTNLVLSLLALGVPKMAQLILPLSLFLGLLMTLGRLY
TDSEITVMHACGLGKRTLIIAAMVLALFTSVIAAANVFWVGPWASRYQDVVVSEAKANPSIAGLAEGQFKTSQDGNAVLF
IGNVKGSTFNNVFLAQLRPNGNQRPSVVVAEHGQINQMKDGSQVVTLDKGTRFEGTALLRDFRITDFNDYKAVVGHRAVT
VDGNQAEQMSMKTLLASDDPDARAEFHWRLTLVLSVVIMALLVVPLSVVNPRQGRVLSMLPAILLYLIFFLLQTSLRSNG
GKGKLDPMVWLWVVNAAYFAIALALNLWDTVPMRKLRARLRGAA

Specific function: Part of the ABC transporter complex lptBFG involved in the translocation of lipopolysaccharide (LPS) from the inner membrane to the outer membrane [H]

COG id: COG0795

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lptF/lptG family [H]

Homologues:

Organism=Escherichia coli, GI1790712, Length=358, Percent_Identity=72.0670391061452, Blast_Score=488, Evalue=1e-139,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005495 [H]

Pfam domain/function: PF03739 YjgP_YjgQ [H]

EC number: NA

Molecular weight: Translated: 39932; Mature: 39932

Theoretical pI: Translated: 10.20; Mature: 10.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIIRYLVRETLKSQIAILFILLLIFFCQNLVRVLGDAVDGDVPTNLVLSLLALGVPKMA
CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHH
QLILPLSLFLGLLMTLGRLYTDSEITVMHACGLGKRTLIIAAMVLALFTSVIAAANVFWV
HHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCEEEE
GPWASRYQDVVVSEAKANPSIAGLAEGQFKTSQDGNAVLFIGNVKGSTFNNVFLAQLRPN
CCHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEECCC
GNQRPSVVVAEHGQINQMKDGSQVVTLDKGTRFEGTALLRDFRITDFNDYKAVVGHRAVT
CCCCCEEEEECCCCCCCCCCCCEEEEECCCCCCCCHHHHHCCCCCCCCCHHHHHCCEEEE
VDGNQAEQMSMKTLLASDDPDARAEFHWRLTLVLSVVIMALLVVPLSVVNPRQGRVLSML
ECCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
PAILLYLIFFLLQTSLRSNGGKGKLDPMVWLWVVNAAYFAIALALNLWDTVPMRKLRARL
HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
RGAA
CCCC
>Mature Secondary Structure
MIIIRYLVRETLKSQIAILFILLLIFFCQNLVRVLGDAVDGDVPTNLVLSLLALGVPKMA
CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHH
QLILPLSLFLGLLMTLGRLYTDSEITVMHACGLGKRTLIIAAMVLALFTSVIAAANVFWV
HHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCEEEE
GPWASRYQDVVVSEAKANPSIAGLAEGQFKTSQDGNAVLFIGNVKGSTFNNVFLAQLRPN
CCHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEECCC
GNQRPSVVVAEHGQINQMKDGSQVVTLDKGTRFEGTALLRDFRITDFNDYKAVVGHRAVT
CCCCCEEEEECCCCCCCCCCCCEEEEECCCCCCCCHHHHHCCCCCCCCCHHHHHCCEEEE
VDGNQAEQMSMKTLLASDDPDARAEFHWRLTLVLSVVIMALLVVPLSVVNPRQGRVLSML
ECCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
PAILLYLIFFLLQTSLRSNGGKGKLDPMVWLWVVNAAYFAIALALNLWDTVPMRKLRARL
HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
RGAA
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]