| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is ywrO [H]
Identifier: 157368774
GI number: 157368774
Start: 579680
End: 580204
Strand: Direct
Name: ywrO [H]
Synonym: Spro_0527
Alternate gene names: 157368774
Gene position: 579680-580204 (Clockwise)
Preceding gene: 157368770
Following gene: 157368777
Centisome position: 10.64
GC content: 56.57
Gene sequence:
>525_bases ATGTCGCGTATTTTAGTGTTAACCGCCCACCGTTTTCCCGATGACTCACGGATCAACAAAGCGTTGATCGAGGCCCTACG TCCTTTGCCGAACGTGACTATTCACGAACTGATGCGTACCTACCCGGACTATCAAATCGACGTGGCGCGCGAGCAGGAAT TGCTGCAGGGCCATGATGCGGTGGTGATGCTGTTCCCATTCTACTGGTACAGTTCCCCGGCGATCCTCAGTGAATGGCAG GACGCGGTATTAACCCACGGTTTCGCCTACGGCAGCGAAGGCACCCAACTGCAGGGTAAACCGCTGCAACTGGTGGTCAC TACCGGCGGCAATCAGCAGGCTTATACGCCAGAAGGTTATAACCGTTATCCGGTGGCAGATTTGCTGCGCCCGTTCCATG CGGTGGCCAATCTGACCGGCATGGATTACCTGCCGCCGCATCTGGTGCAGGGGGTGTTTGATATGAGCGATGAACGCCTG GCGCAAGAGGCTGCCGGCGTGGTGGAGCTGCTGAAAAAACTGTAG
Upstream 100 bases:
>100_bases GTTGATACTTTCGGTTGAAATTAAAGTGACAACTAACAGCCTACACCCGGCGCGTGAGAAATGGAAAAATGCGATATCAA ATTTAAATCAAGGATCTCTT
Downstream 100 bases:
>100_bases GGCGCAGCCGGCCACGCCCCGACAGCATTAGTCTTCCAGCAACCACCACACCGCTTCGAACGGGCGTAAGCTGGTGGCCT GCGGCTGGGCTGGGGCGTCG
Product: NAD(P)H dehydrogenase (quinone)
Products: NA
Alternate protein names: GSP14 [H]
Number of amino acids: Translated: 174; Mature: 173
Protein sequence:
>174_residues MSRILVLTAHRFPDDSRINKALIEALRPLPNVTIHELMRTYPDYQIDVAREQELLQGHDAVVMLFPFYWYSSPAILSEWQ DAVLTHGFAYGSEGTQLQGKPLQLVVTTGGNQQAYTPEGYNRYPVADLLRPFHAVANLTGMDYLPPHLVQGVFDMSDERL AQEAAGVVELLKKL
Sequences:
>Translated_174_residues MSRILVLTAHRFPDDSRINKALIEALRPLPNVTIHELMRTYPDYQIDVAREQELLQGHDAVVMLFPFYWYSSPAILSEWQ DAVLTHGFAYGSEGTQLQGKPLQLVVTTGGNQQAYTPEGYNRYPVADLLRPFHAVANLTGMDYLPPHLVQGVFDMSDERL AQEAAGVVELLKKL >Mature_173_residues SRILVLTAHRFPDDSRINKALIEALRPLPNVTIHELMRTYPDYQIDVAREQELLQGHDAVVMLFPFYWYSSPAILSEWQD AVLTHGFAYGSEGTQLQGKPLQLVVTTGGNQQAYTPEGYNRYPVADLLRPFHAVANLTGMDYLPPHLVQGVFDMSDERLA QEAAGVVELLKKL
Specific function: Unknown
COG id: COG2249
COG function: function code R; Putative NADPH-quinone reductase (modulator of drug activity B)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NAD(P)H dehydrogenase (quinone) family [H]
Homologues:
Organism=Homo sapiens, GI156564357, Length=110, Percent_Identity=40, Blast_Score=70, Evalue=7e-13, Organism=Escherichia coli, GI1789750, Length=163, Percent_Identity=42.9447852760736, Blast_Score=136, Evalue=7e-34, Organism=Escherichia coli, GI1786231, Length=161, Percent_Identity=40.3726708074534, Blast_Score=120, Evalue=4e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003680 [H]
Pfam domain/function: PF02525 Flavodoxin_2 [H]
EC number: 1.6.99.- [C]
Molecular weight: Translated: 19610; Mature: 19478
Theoretical pI: Translated: 5.19; Mature: 5.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRILVLTAHRFPDDSRINKALIEALRPLPNVTIHELMRTYPDYQIDVAREQELLQGHDA CCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEEHHHHHHHHCCCCE VVMLFPFYWYSSPAILSEWQDAVLTHGFAYGSEGTQLQGKPLQLVVTTGGNQQAYTPEGY EEEEEHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCEECCCCEEEEEEECCCCCCCCCCCC NRYPVADLLRPFHAVANLTGMDYLPPHLVQGVFDMSDERLAQEAAGVVELLKKL CCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHC >Mature Secondary Structure SRILVLTAHRFPDDSRINKALIEALRPLPNVTIHELMRTYPDYQIDVAREQELLQGHDA CEEEEEEECCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEEHHHHHHHHCCCCE VVMLFPFYWYSSPAILSEWQDAVLTHGFAYGSEGTQLQGKPLQLVVTTGGNQQAYTPEGY EEEEEHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCEECCCCEEEEEEECCCCCCCCCCCC NRYPVADLLRPFHAVANLTGMDYLPPHLVQGVFDMSDERLAQEAAGVVELLKKL CCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9353933; 9384377; 9298659 [H]