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The map label for this gene is yraR [H]

Identifier: 157368758

GI number: 157368758

Start: 565484

End: 566122

Strand: Direct

Name: yraR [H]

Synonym: Spro_0511

Alternate gene names: 157368758

Gene position: 565484-566122 (Clockwise)

Preceding gene: 157368757

Following gene: 157368770

Centisome position: 10.38

GC content: 61.5

Gene sequence:

>639_bases
ATGGCACGGGTATTTATGGTAGGGGCTACCGGGTTGGTGGGGCGCGAACTGTTGCACCTGCTGCAGGCCGATCCGCAGGT
CACGGCGATCGTGGCGCCAACGCGTAAGCCGCTGCCGGCGCATGAAAAATTGGTTAACCCGGTAGGTGATGACCTGTTCG
CGCTGCTGACAAAGCAGGAGCAGCCGGTCGATATAGTATTCTGTTGCCTGGGTACCACGCGGCGTGAGGCGGGCAGCGAC
GCCAATTTCCATTACGTCGATTACACCCTGGTGGTGGAAAGCGCGCTGACCGGTCGGCGATTAGGTGCGCAGCACTGTCT
GGCGGTCAGTGCACTGGGTGCCAGTCCGCGCTCGACCTTCCTTTACAACCGTACCAAGGGGGAAATGGAACAGGCGCTGC
GTGAGCAGAACTGGCCGCGCCTGACGCTGGTGCGGCCATCGATGCTGCTGGGCGAACGCTCTTCACCACGTTTGCTGGAG
CGCCTGAGTGCGCCGTTGTTTAAATTGCTGCCCGGCAAATGGCGCGGGGTTGCCGCCAAAGACGTGGCGCAGACTCTGTT
GGAGCAGGCGTTCAGCCCCGGTCAGGGTGTTAAGGTGCTGGAATCCGATCGGCTGCATTGCTACCACAGTGCACGCTGA

Upstream 100 bases:

>100_bases
GGCAAGGACCATGGATGGGCCTTGTAAGCAGGTAACAACGCTGCAACTTGAAAGATGACGGGTATATACTTTTCATAGAG
ATCATTCGGCGGGAGGGTAT

Downstream 100 bases:

>100_bases
GATTATCGAACGCCAATTCCAGACCCGGTGGCAGTTCGTTGTCCATCAGCCACAAATCGAGATGATGGCTGATGTGCGTC
AGCAGGGTGCGGCCGGGTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 211

Protein sequence:

>212_residues
MARVFMVGATGLVGRELLHLLQADPQVTAIVAPTRKPLPAHEKLVNPVGDDLFALLTKQEQPVDIVFCCLGTTRREAGSD
ANFHYVDYTLVVESALTGRRLGAQHCLAVSALGASPRSTFLYNRTKGEMEQALREQNWPRLTLVRPSMLLGERSSPRLLE
RLSAPLFKLLPGKWRGVAAKDVAQTLLEQAFSPGQGVKVLESDRLHCYHSAR

Sequences:

>Translated_212_residues
MARVFMVGATGLVGRELLHLLQADPQVTAIVAPTRKPLPAHEKLVNPVGDDLFALLTKQEQPVDIVFCCLGTTRREAGSD
ANFHYVDYTLVVESALTGRRLGAQHCLAVSALGASPRSTFLYNRTKGEMEQALREQNWPRLTLVRPSMLLGERSSPRLLE
RLSAPLFKLLPGKWRGVAAKDVAQTLLEQAFSPGQGVKVLESDRLHCYHSAR
>Mature_211_residues
ARVFMVGATGLVGRELLHLLQADPQVTAIVAPTRKPLPAHEKLVNPVGDDLFALLTKQEQPVDIVFCCLGTTRREAGSDA
NFHYVDYTLVVESALTGRRLGAQHCLAVSALGASPRSTFLYNRTKGEMEQALREQNWPRLTLVRPSMLLGERSSPRLLER
LSAPLFKLLPGKWRGVAAKDVAQTLLEQAFSPGQGVKVLESDRLHCYHSAR

Specific function: Unknown

COG id: COG0702

COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To yeast YER004W [H]

Homologues:

Organism=Homo sapiens, GI148728172, Length=212, Percent_Identity=30.6603773584906, Blast_Score=91, Evalue=6e-19,
Organism=Homo sapiens, GI148728168, Length=212, Percent_Identity=30.6603773584906, Blast_Score=91, Evalue=6e-19,
Organism=Homo sapiens, GI148728164, Length=212, Percent_Identity=30.6603773584906, Blast_Score=91, Evalue=6e-19,
Organism=Homo sapiens, GI148728166, Length=212, Percent_Identity=30.6603773584906, Blast_Score=91, Evalue=1e-18,
Organism=Escherichia coli, GI87082218, Length=206, Percent_Identity=56.7961165048544, Blast_Score=235, Evalue=1e-63,
Organism=Caenorhabditis elegans, GI71983631, Length=212, Percent_Identity=31.6037735849057, Blast_Score=108, Evalue=2e-24,
Organism=Saccharomyces cerevisiae, GI6320840, Length=157, Percent_Identity=32.484076433121, Blast_Score=69, Evalue=7e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000534 [H]

Pfam domain/function: PF01118 Semialdhyde_dh [H]

EC number: NA

Molecular weight: Translated: 23379; Mature: 23248

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARVFMVGATGLVGRELLHLLQADPQVTAIVAPTRKPLPAHEKLVNPVGDDLFALLTKQE
CCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHCCCCHHHHHHHHCCC
QPVDIVFCCLGTTRREAGSDANFHYVDYTLVVESALTGRRLGAQHCLAVSALGASPRSTF
CCCEEEEEECCCHHHHCCCCCCEEEEEHHHEEHHHHHHHHCCHHHHHHHHHCCCCCCCCE
LYNRTKGEMEQALREQNWPRLTLVRPSMLLGERSSPRLLERLSAPLFKLLPGKWRGVAAK
EEECCHHHHHHHHHHCCCCEEEEECCHHHHCCCCCHHHHHHHCCCHHHHCCCCCCCCCHH
DVAQTLLEQAFSPGQGVKVLESDRLHCYHSAR
HHHHHHHHHHCCCCCCCEEECCCCEEEEECCC
>Mature Secondary Structure 
ARVFMVGATGLVGRELLHLLQADPQVTAIVAPTRKPLPAHEKLVNPVGDDLFALLTKQE
CEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHCCCCHHHHHHHHCCC
QPVDIVFCCLGTTRREAGSDANFHYVDYTLVVESALTGRRLGAQHCLAVSALGASPRSTF
CCCEEEEEECCCHHHHCCCCCCEEEEEHHHEEHHHHHHHHCCHHHHHHHHHCCCCCCCCE
LYNRTKGEMEQALREQNWPRLTLVRPSMLLGERSSPRLLERLSAPLFKLLPGKWRGVAAK
EEECCHHHHHHHHHHCCCCEEEEECCHHHHCCCCCHHHHHHHCCCHHHHCCCCCCCCCHH
DVAQTLLEQAFSPGQGVKVLESDRLHCYHSAR
HHHHHHHHHHCCCCCCCEEECCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]