| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is yhhJ [C]
Identifier: 157368747
GI number: 157368747
Start: 553336
End: 554490
Strand: Direct
Name: yhhJ [C]
Synonym: Spro_0500
Alternate gene names: 157368747
Gene position: 553336-554490 (Clockwise)
Preceding gene: 157368746
Following gene: 157368748
Centisome position: 10.16
GC content: 56.62
Gene sequence:
>1155_bases ATGGTTATGGAAAGAGTAAGGGCCGGTTGGCGCTGCTTCAGTCACGCGTTTGACAACGAGTGCCGCGTCGCCTTCCGCAG CCCGGTAATACACTGGCTGAGCTGGATTTTCCCGCTGATGCTGTTTGGTCTGGTCAGCAGCAACTTTTCGGAAGGGACCT TGCTGGATCTGCCGGTGTCGGTGGTGGATAACGATCACAGCTCGTTGTCCAAGTCGCTGACGCGCCGACTGGATGCCGGC TCTCATGCTCACGTAGAGCTATATGACGGCGGGCTGAATGAATCGCTGTATCGTCTGCGTAGTGCGCAGGATTACGCGTT GTTGTACGTCCCGCCGGACTTTGAAGCCAATGCGCTGGCGGGCAAGCAGCCGAGCGTGGTGATGTATTACAACGCATTGT TCTATGGTGCCGGGCTGTATTCTACTCAGGATTTCAGCGGGCTGATGACCGAAATCAATGCCAACTACCGCAGCATTATC GCCGCCGAGATGGGCAAGACGCTGCCGCCGTTGGCGGACGTGACGCTGTCGTACGGCAGTCTATTCAACGCCAGCGGCAG TTATATTTATTACCAGCAGTTTGCCGCGACTATCCATTTGCTGCAGCTGTTTGTGGTGACCTGCATGATCTACGTGTTGG CGCGCAGCAAATCGCTGTTGAAGGCCCGGCCATTCAGCCTGGCACTGCTGGGTAAATTGGCGCCATATACCCTGTGCTTC ACCAGCCTGCTGATGGTTGAAATTGCCGCGCTGGTGGGTATTTTTGACGCCCGCGTCAGCGGCAATCCGCTGTTTATGCT GATGATAGCCTTCTTTTACGTGATGGCGGCGCAGAGCATCGGCCTGCTGCTGTTTACCTTTACCAGCAGCATTATCACCG CCTACAGCCTGATTGCCATCCTGGTCAGTATTGCGCTGACCTTCTCGGGTATGGCGGTACCGGAACTGTCGATGCCGCTG CCGGCGCGAATCATCTCCAATATTGAACCCTTAACTCACGCGCTGTACGCGATGTTTGACGTGTTCCTGCGGCAGGTTCC GGCCAGTGCCATCTTCAGCGTTTGTGCATTACTGTCCGTCTACCCGTTGGTGACGGCATTCCTGGTGCGTAACCGGCTGT TGCCGCGGCTGCTGAAGGAAGGGGGCGCGGGATGA
Upstream 100 bases:
>100_bases GCGCCACTCGTGCTACCGGTGACTTCGACCTGAAAACCTTTGAAGTGCGGCTGTATCCGTCACAGCCGGTGGAAGGCCTG CGTCCAGGGATGAGCAGCTT
Downstream 100 bases:
>100_bases AAATCTACTGGCAAACCTTTGTCCGGGTGCTGCTTGGCATGCTGGAGAGGCCGATGTGGTTGATGCTGATCCTGTCGCTG TGCGTCATGAGCATGGTCTA
Product: ABC-2 type transporter
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 384; Mature: 384
Protein sequence:
>384_residues MVMERVRAGWRCFSHAFDNECRVAFRSPVIHWLSWIFPLMLFGLVSSNFSEGTLLDLPVSVVDNDHSSLSKSLTRRLDAG SHAHVELYDGGLNESLYRLRSAQDYALLYVPPDFEANALAGKQPSVVMYYNALFYGAGLYSTQDFSGLMTEINANYRSII AAEMGKTLPPLADVTLSYGSLFNASGSYIYYQQFAATIHLLQLFVVTCMIYVLARSKSLLKARPFSLALLGKLAPYTLCF TSLLMVEIAALVGIFDARVSGNPLFMLMIAFFYVMAAQSIGLLLFTFTSSIITAYSLIAILVSIALTFSGMAVPELSMPL PARIISNIEPLTHALYAMFDVFLRQVPASAIFSVCALLSVYPLVTAFLVRNRLLPRLLKEGGAG
Sequences:
>Translated_384_residues MVMERVRAGWRCFSHAFDNECRVAFRSPVIHWLSWIFPLMLFGLVSSNFSEGTLLDLPVSVVDNDHSSLSKSLTRRLDAG SHAHVELYDGGLNESLYRLRSAQDYALLYVPPDFEANALAGKQPSVVMYYNALFYGAGLYSTQDFSGLMTEINANYRSII AAEMGKTLPPLADVTLSYGSLFNASGSYIYYQQFAATIHLLQLFVVTCMIYVLARSKSLLKARPFSLALLGKLAPYTLCF TSLLMVEIAALVGIFDARVSGNPLFMLMIAFFYVMAAQSIGLLLFTFTSSIITAYSLIAILVSIALTFSGMAVPELSMPL PARIISNIEPLTHALYAMFDVFLRQVPASAIFSVCALLSVYPLVTAFLVRNRLLPRLLKEGGAG >Mature_384_residues MVMERVRAGWRCFSHAFDNECRVAFRSPVIHWLSWIFPLMLFGLVSSNFSEGTLLDLPVSVVDNDHSSLSKSLTRRLDAG SHAHVELYDGGLNESLYRLRSAQDYALLYVPPDFEANALAGKQPSVVMYYNALFYGAGLYSTQDFSGLMTEINANYRSII AAEMGKTLPPLADVTLSYGSLFNASGSYIYYQQFAATIHLLQLFVVTCMIYVLARSKSLLKARPFSLALLGKLAPYTLCF TSLLMVEIAALVGIFDARVSGNPLFMLMIAFFYVMAAQSIGLLLFTFTSSIITAYSLIAILVSIALTFSGMAVPELSMPL PARIISNIEPLTHALYAMFDVFLRQVPASAIFSVCALLSVYPLVTAFLVRNRLLPRLLKEGGAG
Specific function: Unknown
COG id: COG0842
COG function: function code V; ABC-type multidrug transport system, permease component
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42318; Mature: 42318
Theoretical pI: Translated: 7.89; Mature: 7.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVMERVRAGWRCFSHAFDNECRVAFRSPVIHWLSWIFPLMLFGLVSSNFSEGTLLDLPVS CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCHH VVDNDHSSLSKSLTRRLDAGSHAHVELYDGGLNESLYRLRSAQDYALLYVPPDFEANALA HHCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHCCCCEEEEEECCCCCCCCCC GKQPSVVMYYNALFYGAGLYSTQDFSGLMTEINANYRSIIAAEMGKTLPPLADVTLSYGS CCCCCEEEEEHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHH LFNASGSYIYYQQFAATIHLLQLFVVTCMIYVLARSKSLLKARPFSLALLGKLAPYTLCF HCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCHHHHHHHHHHHHHHH TSLLMVEIAALVGIFDARVSGNPLFMLMIAFFYVMAAQSIGLLLFTFTSSIITAYSLIAI HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVSIALTFSGMAVPELSMPLPARIISNIEPLTHALYAMFDVFLRQVPASAIFSVCALLSV HHHHHHHHCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH YPLVTAFLVRNRLLPRLLKEGGAG HHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MVMERVRAGWRCFSHAFDNECRVAFRSPVIHWLSWIFPLMLFGLVSSNFSEGTLLDLPVS CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCHH VVDNDHSSLSKSLTRRLDAGSHAHVELYDGGLNESLYRLRSAQDYALLYVPPDFEANALA HHCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHCCCCEEEEEECCCCCCCCCC GKQPSVVMYYNALFYGAGLYSTQDFSGLMTEINANYRSIIAAEMGKTLPPLADVTLSYGS CCCCCEEEEEHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHH LFNASGSYIYYQQFAATIHLLQLFVVTCMIYVLARSKSLLKARPFSLALLGKLAPYTLCF HCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCHHHHHHHHHHHHHHH TSLLMVEIAALVGIFDARVSGNPLFMLMIAFFYVMAAQSIGLLLFTFTSSIITAYSLIAI HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVSIALTFSGMAVPELSMPLPARIISNIEPLTHALYAMFDVFLRQVPASAIFSVCALLSV HHHHHHHHCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH YPLVTAFLVRNRLLPRLLKEGGAG HHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA